RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 COX6A2Q02221 97 aa6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 Q6ZN92 141 aa6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 C2orf88Q9BSF0 95 aa6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 CYSLTR1Q9Y271 337 aa6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 LOC107984640A0A0U1RRK4 108 aa6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 OXTP01178 125 aa6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 IFITM2Q01629 132 aa6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 RNF151Q2KHN1 245 aa6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 MAJINQ3KP22 176 aa6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 TEX43Q6ZNM6 134 aa6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 TMEM141Q96I45 108 aa6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 CAMK2N2Q96S95 79 aa6.55□□□□□ -1.36
NPIPB4-217ENST00000543449 LOC389332A0A1B0GUA5 103 aa6.54□□□□□ -1.36
NPIPB4-217ENST00000543449 ADCYAP1P18509 176 aa6.54□□□□□ -1.36
NPIPB4-217ENST00000543449 RHEBQ15382 184 aa6.54□□□□□ -1.36
NPIPB4-217ENST00000543449 COMMD7Q86VX2 200 aa6.54□□□□□ -1.36
NPIPB4-217ENST00000543449 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
NPIPB4-217ENST00000543449 IGHV3OR16-9A0A0B4J2B5 98 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 PANO1I0J062 215 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 MT-ND6P03923 174 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 SEC11AP67812 179 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 LINC01561Q8N1V8 128 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 STPG4Q8N801 248 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
NPIPB4-217ENST00000543449 IGLV4-3A0A075B6K6 122 aa6.52□□□□□ -1.37
NPIPB4-217ENST00000543449 NDUFA1O15239 70 aa6.52□□□□□ -1.37
NPIPB4-217ENST00000543449 CHTF8P0CG12 524 aa6.52□□□□□ -1.37
NPIPB4-217ENST00000543449 ORAOV1Q8WV07 137 aa6.52□□□□□ -1.37
NPIPB4-217ENST00000543449 VCX2Q9H322 139 aa6.52□□□□□ -1.37
NPIPB4-217ENST00000543449 A0A087WZ39 114 aa6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 A0A096LNI7 61 aa6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 NDUFA5Q16718 116 aa6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 C10orf91Q5T1B1 145 aa6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 Q6ZRU5 148 aa6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 TIMM17AQ99595 171 aa6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 CARHSP1Q9Y2V2 147 aaKnown RBP6.51□□□□□ -1.37
NPIPB4-217ENST00000543449 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
NPIPB4-217ENST00000543449 LINC00526Q96FQ7 95 aa6.5□□□□□ -1.37
NPIPB4-217ENST00000543449 AMELXQ99217 191 aa6.5□□□□□ -1.37
NPIPB4-217ENST00000543449 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
NPIPB4-217ENST00000543449 UBE2D1P51668 147 aa6.49□□□□□ -1.37
NPIPB4-217ENST00000543449 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
NPIPB4-217ENST00000543449 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
NPIPB4-217ENST00000543449 TOMM6Q96B49 74 aa6.49□□□□□ -1.37
NPIPB4-217ENST00000543449 RPS10P5Q9NQ39 176 aa6.49□□□□□ -1.37
NPIPB4-217ENST00000543449 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
NPIPB4-217ENST00000543449 IGIPA6NJ69 53 aa6.48□□□□□ -1.37
NPIPB4-217ENST00000543449 PRSS2P07478 247 aa6.48□□□□□ -1.37
NPIPB4-217ENST00000543449 HERVK_113P63121 156 aa6.48□□□□□ -1.37
NPIPB4-217ENST00000543449 RPL18AQ02543 176 aaKnown RBP6.48□□□□□ -1.37
NPIPB4-217ENST00000543449 ERASQ7Z444 233 aa6.48□□□□□ -1.37
NPIPB4-217ENST00000543449 FAM19A3Q7Z5A8 133 aa6.48□□□□□ -1.37
NPIPB4-217ENST00000543449 FLG2Q5D862 2391 aaPredicted RBP6.48□□□□□ -1.37
NPIPB4-217ENST00000543449 FAT1Q14517 4588 aa6.48□□□□□ -1.37
NPIPB4-217ENST00000543449 DMBT1Q9UGM3 2413 aaPredicted RBP6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 TRBV30A0A0K0K1B3 111 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 SNAPINO95295 136 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 TLX1NBP0CAT3 122 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 FABP9Q0Z7S8 132 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 KIAA1644Q3SXP7 199 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 FA2HQ7L5A8 372 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 SVBPQ8N300 66 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 PACRGQ96M98 296 aaPredicted RBP6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 SCGB3A1Q96QR1 104 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 ALKBH7Q9BT30 221 aaPredicted RBP6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 GEMIN7Q9H840 131 aaKnown RBP6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 SMCO4Q9NRQ5 59 aa6.47□□□□□ -1.37
NPIPB4-217ENST00000543449 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
NPIPB4-217ENST00000543449 Q6ZRP5 223 aa6.46□□□□□ -1.38
NPIPB4-217ENST00000543449 MRPL18Q9H0U6 180 aaKnown RBP6.46□□□□□ -1.38
NPIPB4-217ENST00000543449 VPS13BQ7Z7G8 4022 aa6.45□□□□□ -1.38
NPIPB4-217ENST00000543449 CXCL5P42830 114 aa6.45□□□□□ -1.38
NPIPB4-217ENST00000543449 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
NPIPB4-217ENST00000543449 SERTAD4-AS1Q5TG53 156 aa6.45□□□□□ -1.38
NPIPB4-217ENST00000543449 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
NPIPB4-217ENST00000543449 APOC3P02656 99 aa6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 RAB5BP61020 215 aa6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 CKS1BP61024 79 aa6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 C9orf116Q5BN46 136 aaPredicted RBP6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 LINC00173Q6ZV60 143 aa6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 Q8IZM0 81 aa6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 TRAPPC1Q9Y5R8 145 aa6.44□□□□□ -1.38
NPIPB4-217ENST00000543449 TINCRA0A1B0GVN0 87 aa6.43□□□□□ -1.38
NPIPB4-217ENST00000543449 SPINK6Q6UWN8 80 aa6.43□□□□□ -1.38
NPIPB4-217ENST00000543449 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
NPIPB4-217ENST00000543449 C6orf48Q9UBA6 75 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms