RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
RABGGTA-203ENST00000543002 GVQW2A0A096LPI5 108 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-203ENST00000543002 SERF1AO75920 110 aa11.14□□□□□ -0.63
RABGGTA-203ENST00000543002 MALP21145 153 aa11.14□□□□□ -0.63
RABGGTA-203ENST00000543002 LINC00310P59036 64 aa11.14□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BKO60814 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 ATP5LO75964 103 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BJP06899 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BOP23527 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BBP33778 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BDP58876 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BCP62807 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 COX6A2Q02221 97 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 PMVKQ15126 192 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST2H2BEQ16778 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIGD2BQ4VC39 106 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BHQ93079 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BNQ99877 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 HIST1H2BMQ99879 126 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 CST9LQ9H4G1 147 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 BIRC6Q9NR09 4857 aa11.13□□□□□ -0.63
RABGGTA-203ENST00000543002 KRTAP10-1P60331 282 aa11.12□□□□□ -0.63
RABGGTA-203ENST00000543002 CNBPP62633 177 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-203ENST00000543002 SEC11AP67812 179 aa11.12□□□□□ -0.63
RABGGTA-203ENST00000543002 APOMO95445 188 aa11.11□□□□□ -0.63
RABGGTA-203ENST00000543002 FAM19A2Q8N3H0 131 aa11.11□□□□□ -0.63
RABGGTA-203ENST00000543002 A0A087WZ39 114 aa11.1□□□□□ -0.63
RABGGTA-203ENST00000543002 A0A0J9YXV3 536 aa11.1□□□□□ -0.63
RABGGTA-203ENST00000543002 NUPR1O60356 82 aa11.1□□□□□ -0.63
RABGGTA-203ENST00000543002 SLPIP03973 132 aa11.1□□□□□ -0.63
RABGGTA-203ENST00000543002 HERVK_113P63121 156 aa11.1□□□□□ -0.63
RABGGTA-203ENST00000543002 DYNC1H1Q14204 4646 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-203ENST00000543002 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 LINC01561Q8N1V8 128 aa11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 GEMIN7Q9H840 131 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 TINCRA0A1B0GVN0 87 aa11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 NDUFA6P56556 154 aa11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 LINC01620Q4KN68 170 aa11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
RABGGTA-203ENST00000543002 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
RABGGTA-203ENST00000543002 IFI27L1Q96BM0 104 aa11.08□□□□□ -0.64
RABGGTA-203ENST00000543002 LINC00526Q96FQ7 95 aa11.08□□□□□ -0.64
RABGGTA-203ENST00000543002 DNAH5Q8TE73 4624 aa11.07□□□□□ -0.64
RABGGTA-203ENST00000543002 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
RABGGTA-203ENST00000543002 IGLV4-69A0A075B6H9 119 aa11.06□□□□□ -0.64
RABGGTA-203ENST00000543002 IGLV5-45A0A087WSX0 123 aa11.06□□□□□ -0.64
RABGGTA-203ENST00000543002 CDK2AP2O75956 126 aa11.06□□□□□ -0.64
RABGGTA-203ENST00000543002 SPAG11BQ08648 103 aa11.06□□□□□ -0.64
RABGGTA-203ENST00000543002 LEPROTL1O95214 131 aa11.05□□□□□ -0.64
RABGGTA-203ENST00000543002 IGLC3P0DOY3 106 aa11.05□□□□□ -0.64
RABGGTA-203ENST00000543002 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
RABGGTA-203ENST00000543002 C2orf48Q96LS8 159 aa11.05□□□□□ -0.64
RABGGTA-203ENST00000543002 LRP1BQ9NZR2 4599 aa11.04□□□□□ -0.64
RABGGTA-203ENST00000543002 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
RABGGTA-203ENST00000543002 SYCNQ0VAF6 134 aa11.04□□□□□ -0.64
RABGGTA-203ENST00000543002 COA6Q5JTJ3 125 aaKnown RBP11.03□□□□□ -0.64
RABGGTA-203ENST00000543002 SDIM1Q6ZPB5 146 aa11.03□□□□□ -0.64
RABGGTA-203ENST00000543002 CARD19Q96LW7 228 aa11.03□□□□□ -0.64
RABGGTA-203ENST00000543002 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
RABGGTA-203ENST00000543002 FAM30AQ9NZY2 134 aa11.03□□□□□ -0.64
RABGGTA-203ENST00000543002 HSPB8Q9UJY1 196 aa11.03□□□□□ -0.64
RABGGTA-203ENST00000543002 F8WDY8 70 aa11.02□□□□□ -0.65
RABGGTA-203ENST00000543002 KIAA0087Q14695 138 aa11.02□□□□□ -0.65
RABGGTA-203ENST00000543002 Q6ZSA8 131 aa11.02□□□□□ -0.65
RABGGTA-203ENST00000543002 PACRGQ96M98 296 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-203ENST00000543002 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
RABGGTA-203ENST00000543002 CHTOPQ9Y3Y2 248 aaKnown RBP11.02□□□□□ -0.65
RABGGTA-203ENST00000543002 FABP4P15090 132 aa11.01□□□□□ -0.65
RABGGTA-203ENST00000543002 Q6ZRU5 148 aa11.01□□□□□ -0.65
RABGGTA-203ENST00000543002 XGP55808 180 aa11□□□□□ -0.65
RABGGTA-203ENST00000543002 C11orf86A6NJI1 115 aa10.99□□□□□ -0.65
RABGGTA-203ENST00000543002 SMIM1B2RUZ4 78 aa10.99□□□□□ -0.65
RABGGTA-203ENST00000543002 H3BRM9 83 aa10.99□□□□□ -0.65
RABGGTA-203ENST00000543002 ZNF22P17026 224 aaPredicted RBP10.99□□□□□ -0.65
RABGGTA-203ENST00000543002 F8VRH5 84 aa10.98□□□□□ -0.65
RABGGTA-203ENST00000543002 NDUFA1O15239 70 aa10.98□□□□□ -0.65
RABGGTA-203ENST00000543002 PRSS2P07478 247 aa10.98□□□□□ -0.65
RABGGTA-203ENST00000543002 Q8IZM0 81 aa10.98□□□□□ -0.65
RABGGTA-203ENST00000543002 MRPL35Q9NZE8 188 aaKnown RBP10.98□□□□□ -0.65
RABGGTA-203ENST00000543002 TOMM7Q9P0U1 55 aa10.98□□□□□ -0.65
RABGGTA-203ENST00000543002 SPINK8P0C7L1 97 aa10.97□□□□□ -0.65
RABGGTA-203ENST00000543002 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
RABGGTA-203ENST00000543002 KIAA1109Q2LD37 5005 aa10.97□□□□□ -0.65
RABGGTA-203ENST00000543002 H0Y8G0 127 aa10.96□□□□□ -0.65
RABGGTA-203ENST00000543002 ODF1Q14990 250 aa10.96□□□□□ -0.65
RABGGTA-203ENST00000543002 C6orf226Q5I0X4 101 aa10.96□□□□□ -0.65
RABGGTA-203ENST00000543002 C10orf25Q5T742 122 aa10.96□□□□□ -0.65
RABGGTA-203ENST00000543002 UNQ6190/PRO20217Q6UXQ8 127 aa10.96□□□□□ -0.65
RABGGTA-203ENST00000543002 PKIGQ9Y2B9 76 aa10.96□□□□□ -0.65
RABGGTA-203ENST00000543002 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
RABGGTA-203ENST00000543002 C2orf82Q6UX34 121 aa10.95□□□□□ -0.66
RABGGTA-203ENST00000543002 MAP1LC3CQ9BXW4 147 aa10.95□□□□□ -0.66
RABGGTA-203ENST00000543002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.95□□□□□ -0.66
RABGGTA-203ENST00000543002 CKS1BP61024 79 aa10.94□□□□□ -0.66
RABGGTA-203ENST00000543002 C6orf48Q9UBA6 75 aa10.94□□□□□ -0.66
RABGGTA-203ENST00000543002 IGLV5-39A0A0G2JS06 123 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms