RNA–Protein interactions for RNA: ENST00000542611.5

NBR1-202, Transcript of NBR1, autophagy cargo receptor, humanhuman

TSL 2 BASIC

Gene NBR1, Length 2,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-202ENST00000542611 C20orf173Q96LM9 149 aa8.8□□□□□ -1
NBR1-202ENST00000542611 NOTCH2Q04721 2471 aa8.8□□□□□ -1
NBR1-202ENST00000542611 SETD2Q9BYW2 2564 aaPredicted RBP8.8□□□□□ -1
NBR1-202ENST00000542611 HIST2H2BDQ6DRA6 164 aa8.8□□□□□ -1
NBR1-202ENST00000542611 NACAE9PAV3 2078 aa8.79□□□□□ -1
NBR1-202ENST00000542611 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
NBR1-202ENST00000542611 MUC4Q99102 2169 aa8.78□□□□□ -1
NBR1-202ENST00000542611 TMEM89A2RUT3 159 aa8.78□□□□□ -1
NBR1-202ENST00000542611 A8MZ25 164 aa8.78□□□□□ -1
NBR1-202ENST00000542611 F5H697 171 aa8.78□□□□□ -1
NBR1-202ENST00000542611 TIMM17BO60830 172 aa8.78□□□□□ -1
NBR1-202ENST00000542611 ZNF415Q09FC8 603 aa8.78□□□□□ -1
NBR1-202ENST00000542611 DEFB136Q30KP8 78 aa8.78□□□□□ -1
NBR1-202ENST00000542611 C18orf65Q6ZTR6 163 aa8.78□□□□□ -1
NBR1-202ENST00000542611 Q8N2B8 174 aa8.78□□□□□ -1
NBR1-202ENST00000542611 TRAV12-2A0A075B6T6 113 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 A0A087WWL8 130 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 DNAJC9-AS1A6NH13 148 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 SOCS3O14543 225 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 RNASE4P34096 147 aaKnown RBP8.77□□□□□ -1.01
NBR1-202ENST00000542611 PRIMA1Q86XR5 153 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 DNAL4O96015 105 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 MRPS36P82909 103 aaKnown RBP8.77□□□□□ -1.01
NBR1-202ENST00000542611 VSIG2Q96IQ7 327 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 SERP1Q9Y6X1 66 aa8.77□□□□□ -1.01
NBR1-202ENST00000542611 NIPBLQ6KC79 2804 aaeCLIP8.76□□□□□ -1.01
NBR1-202ENST00000542611 FAM218AQ96MZ4 157 aa8.76□□□□□ -1.01
NBR1-202ENST00000542611 ESM1Q9NQ30 184 aa8.76□□□□□ -1.01
NBR1-202ENST00000542611 F6UB75 175 aa8.76□□□□□ -1.01
NBR1-202ENST00000542611 UBE2E2Q96LR5 201 aa8.76□□□□□ -1.01
NBR1-202ENST00000542611 C16orf95Q9H693 158 aa8.76□□□□□ -1.01
NBR1-202ENST00000542611 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
NBR1-202ENST00000542611 KHDC1LQ5JSQ8 128 aa8.75□□□□□ -1.01
NBR1-202ENST00000542611 V9GYY9 64 aa8.75□□□□□ -1.01
NBR1-202ENST00000542611 HOXD3P31249 432 aaPredicted RBP8.75□□□□□ -1.01
NBR1-202ENST00000542611 SMR3AQ99954 134 aa8.75□□□□□ -1.01
NBR1-202ENST00000542611 UBE2D4Q9Y2X8 147 aa8.75□□□□□ -1.01
NBR1-202ENST00000542611 K7EMT4 169 aa8.74□□□□□ -1.01
NBR1-202ENST00000542611 LINC00308Q8TCZ7 52 aa8.74□□□□□ -1.01
NBR1-202ENST00000542611 SLURP1P55000 103 aa8.73□□□□□ -1.01
NBR1-202ENST00000542611 FAM104AQ969W3 186 aa8.73□□□□□ -1.01
NBR1-202ENST00000542611 Q9HAA7 133 aa8.73□□□□□ -1.01
NBR1-202ENST00000542611 GHRHP01286 108 aa8.73□□□□□ -1.01
NBR1-202ENST00000542611 C14orf132Q9NPU4 83 aa8.73□□□□□ -1.01
NBR1-202ENST00000542611 CD28P10747 220 aa8.72□□□□□ -1.01
NBR1-202ENST00000542611 FAM74A4Q5TZK3 123 aa8.72□□□□□ -1.01
NBR1-202ENST00000542611 C11orf44Q8N8P7 122 aa8.72□□□□□ -1.01
NBR1-202ENST00000542611 M0QY20 66 aa8.72□□□□□ -1.01
NBR1-202ENST00000542611 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
NBR1-202ENST00000542611 SORL1Q92673 2214 aa8.71□□□□□ -1.01
NBR1-202ENST00000542611 C20orf197Q8N268 126 aa8.71□□□□□ -1.01
NBR1-202ENST00000542611 RBMY1BA6NDE4 496 aaKnown RBP8.71□□□□□ -1.02
NBR1-202ENST00000542611 RBMY1EA6NEQ0 496 aaKnown RBP8.71□□□□□ -1.02
NBR1-202ENST00000542611 RBMY1DP0C7P1 496 aaKnown RBP8.71□□□□□ -1.02
NBR1-202ENST00000542611 RBMY1A1P0DJD3 496 aaKnown RBP8.71□□□□□ -1.02
NBR1-202ENST00000542611 RBMY1CP0DJD4 496 aa8.71□□□□□ -1.02
NBR1-202ENST00000542611 RBMY1FQ15415 496 aaKnown RBP8.71□□□□□ -1.02
NBR1-202ENST00000542611 C1orf195Q5TG92 126 aa8.71□□□□□ -1.02
NBR1-202ENST00000542611 FP248Q71RG6 208 aaPredicted RBP8.71□□□□□ -1.02
NBR1-202ENST00000542611 APRG1Q8IVJ8 170 aa8.71□□□□□ -1.02
NBR1-202ENST00000542611 HIVEP2P31629 2446 aa8.71□□□□□ -1.02
NBR1-202ENST00000542611 SETXQ7Z333 2677 aaKnown RBP8.7□□□□□ -1.02
NBR1-202ENST00000542611 WNK1Q9H4A3 2382 aa8.7□□□□□ -1.02
NBR1-202ENST00000542611 XCL1P47992 114 aa8.7□□□□□ -1.02
NBR1-202ENST00000542611 HILS1P60008 231 aa8.7□□□□□ -1.02
NBR1-202ENST00000542611 XCL2Q9UBD3 114 aa8.7□□□□□ -1.02
NBR1-202ENST00000542611 NDUFA1O15239 70 aa8.7□□□□□ -1.02
NBR1-202ENST00000542611 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
NBR1-202ENST00000542611 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
NBR1-202ENST00000542611 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
NBR1-202ENST00000542611 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
NBR1-202ENST00000542611 SOSTDC1Q6X4U4 206 aa8.69□□□□□ -1.02
NBR1-202ENST00000542611 H7BZZ5 65 aa8.68□□□□□ -1.02
NBR1-202ENST00000542611 C4orf3Q8WVX3 66 aa8.68□□□□□ -1.02
NBR1-202ENST00000542611 OBSCN-AS1Q96MR7 158 aa8.68□□□□□ -1.02
NBR1-202ENST00000542611 A0A1W2PRX2 142 aa8.68□□□□□ -1.02
NBR1-202ENST00000542611 TRAV23DV6A0A075B6W5 121 aa8.67□□□□□ -1.02
NBR1-202ENST00000542611 A0A0U1RQV1 116 aa8.67□□□□□ -1.02
NBR1-202ENST00000542611 KNCNA6PVL3 124 aa8.67□□□□□ -1.02
NBR1-202ENST00000542611 IGKV3-20P01619 116 aa8.67□□□□□ -1.02
NBR1-202ENST00000542611 NSD1Q96L73 2696 aaPredicted RBP8.66□□□□□ -1.02
NBR1-202ENST00000542611 A0A0U1RRA0 63 aa8.66□□□□□ -1.02
NBR1-202ENST00000542611 K7EQG2 157 aa8.66□□□□□ -1.02
NBR1-202ENST00000542611 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
NBR1-202ENST00000542611 RNASE1P07998 156 aaKnown RBP8.66□□□□□ -1.02
NBR1-202ENST00000542611 SNRPD3P62318 126 aaKnown RBP8.66□□□□□ -1.02
NBR1-202ENST00000542611 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
NBR1-202ENST00000542611 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
NBR1-202ENST00000542611 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
NBR1-202ENST00000542611 HIVEP1P15822 2718 aa8.65□□□□□ -1.02
NBR1-202ENST00000542611 LY6G6DO95868 133 aa8.64□□□□□ -1.03
NBR1-202ENST00000542611 WFDC9Q8NEX5 89 aa8.64□□□□□ -1.03
NBR1-202ENST00000542611 ZNF625Q96I27 306 aaPredicted RBP8.64□□□□□ -1.03
NBR1-202ENST00000542611 Q9H8V8 135 aa8.64□□□□□ -1.03
NBR1-202ENST00000542611 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
NBR1-202ENST00000542611 A0A087WYN8 130 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms