RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 DAND5Q8N907 189 aa10.58□□□□□ -0.72
DDX55-209ENST00000542286 CLEC2BQ92478 149 aa10.57□□□□□ -0.72
DDX55-209ENST00000542286 TMEM126AQ9H061 195 aa10.57□□□□□ -0.72
DDX55-209ENST00000542286 COX6CP09669 75 aa10.57□□□□□ -0.72
DDX55-209ENST00000542286 RS1O15537 224 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 SPATA3Q8NHX4 192 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 TIMM21Q9BVV7 248 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 PPDPFQ9H3Y8 114 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 A0A0U1RRA0 63 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 FAM240AA0A1B0GVK7 77 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 COX6A2Q02221 97 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 BEAN1Q3B7T3 259 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 HIVEP1P15822 2718 aa10.56□□□□□ -0.72
DDX55-209ENST00000542286 LITAFQ99732 161 aa10.55□□□□□ -0.72
DDX55-209ENST00000542286 TRBV7-7A0A0K0K1E9 115 aa10.55□□□□□ -0.72
DDX55-209ENST00000542286 ZNF625Q96I27 306 aaPredicted RBP10.55□□□□□ -0.72
DDX55-209ENST00000542286 CDKN2A-AS1Q9UH64 79 aa10.55□□□□□ -0.72
DDX55-209ENST00000542286 KRTAP10-3P60369 221 aa10.54□□□□□ -0.72
DDX55-209ENST00000542286 MRPS36P82909 103 aaKnown RBP10.54□□□□□ -0.72
DDX55-209ENST00000542286 DEFB121Q5J5C9 76 aa10.54□□□□□ -0.72
DDX55-209ENST00000542286 NTM-AS1Q6ZSK4 140 aa10.54□□□□□ -0.72
DDX55-209ENST00000542286 TMEM101Q96IK0 257 aa10.54□□□□□ -0.72
DDX55-209ENST00000542286 FAM236AA0A1B0GUQ0 79 aa10.53□□□□□ -0.72
DDX55-209ENST00000542286 FAM236BA0A1B0GV22 79 aa10.53□□□□□ -0.72
DDX55-209ENST00000542286 LST1O00453 97 aa10.53□□□□□ -0.72
DDX55-209ENST00000542286 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
DDX55-209ENST00000542286 TRAV13-1A0A0B4J241 112 aa10.53□□□□□ -0.72
DDX55-209ENST00000542286 DGAT2L7PQ6IED9 249 aa10.53□□□□□ -0.72
DDX55-209ENST00000542286 EDA2RQ9HAV5 297 aa10.52□□□□□ -0.73
DDX55-209ENST00000542286 J3QKU1 62 aa10.52□□□□□ -0.73
DDX55-209ENST00000542286 RNASE1P07998 156 aaKnown RBP10.52□□□□□ -0.73
DDX55-209ENST00000542286 NDUFA12Q9UI09 145 aa10.52□□□□□ -0.73
DDX55-209ENST00000542286 IGKV3OR2-268A0A0C4DH90 116 aa10.51□□□□□ -0.73
DDX55-209ENST00000542286 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
DDX55-209ENST00000542286 TRGV2A0A075B6R0 118 aa10.5□□□□□ -0.73
DDX55-209ENST00000542286 PLAC8L1A1L4L8 177 aa10.5□□□□□ -0.73
DDX55-209ENST00000542286 IL17DQ8TAD2 202 aa10.5□□□□□ -0.73
DDX55-209ENST00000542286 TRAV25A0A0B4J276 109 aa10.5□□□□□ -0.73
DDX55-209ENST00000542286 IGHV1-58A0A0C4DH39 117 aa10.5□□□□□ -0.73
DDX55-209ENST00000542286 VSIG2Q96IQ7 327 aa10.49□□□□□ -0.73
DDX55-209ENST00000542286 SPANXDQ9BXN6 97 aa10.49□□□□□ -0.73
DDX55-209ENST00000542286 SPANXCQ9NY87 97 aa10.49□□□□□ -0.73
DDX55-209ENST00000542286 K7EQD1 137 aa10.49□□□□□ -0.73
DDX55-209ENST00000542286 IGLV1-51P01701 117 aa10.49□□□□□ -0.73
DDX55-209ENST00000542286 MIAQ16674 131 aa10.49□□□□□ -0.73
DDX55-209ENST00000542286 TEP1Q99973 2627 aaKnown RBP10.49□□□□□ -0.73
DDX55-209ENST00000542286 FLNBO75369 2602 aaKnown RBP10.49□□□□□ -0.73
DDX55-209ENST00000542286 C9orf153Q5TBE3 101 aa10.48□□□□□ -0.73
DDX55-209ENST00000542286 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
DDX55-209ENST00000542286 IMUPQ9GZP8 106 aa10.48□□□□□ -0.73
DDX55-209ENST00000542286 RPL36AP83881 106 aaKnown RBP10.47□□□□□ -0.73
DDX55-209ENST00000542286 LINC00242Q5T6M2 205 aa10.47□□□□□ -0.73
DDX55-209ENST00000542286 RPL36ALQ969Q0 106 aaKnown RBP10.47□□□□□ -0.73
DDX55-209ENST00000542286 DEFB130BP0DP73 79 aa10.46□□□□□ -0.73
DDX55-209ENST00000542286 DEFB130AP0DP74 79 aa10.46□□□□□ -0.73
DDX55-209ENST00000542286 HILS1P60008 231 aa10.46□□□□□ -0.73
DDX55-209ENST00000542286 PIK3CD-AS1Q5SR53 167 aa10.46□□□□□ -0.73
DDX55-209ENST00000542286 C3orf22Q8N5N4 141 aa10.46□□□□□ -0.73
DDX55-209ENST00000542286 DNAJC30Q96LL9 226 aa10.46□□□□□ -0.73
DDX55-209ENST00000542286 ACYP1P07311 99 aa10.46□□□□□ -0.74
DDX55-209ENST00000542286 SMCR5Q8TEV8 140 aa10.45□□□□□ -0.74
DDX55-209ENST00000542286 LINC00482Q8N8I6 264 aa10.45□□□□□ -0.74
DDX55-209ENST00000542286 CSNK1G2-AS1Q8NCQ2 148 aa10.45□□□□□ -0.74
DDX55-209ENST00000542286 C16orf95Q9H693 158 aa10.45□□□□□ -0.74
DDX55-209ENST00000542286 LOC107984640A0A0U1RRK4 108 aa10.44□□□□□ -0.74
DDX55-209ENST00000542286 DEFB4AO15263 64 aa10.44□□□□□ -0.74
DDX55-209ENST00000542286 LY6G6DO95868 133 aa10.44□□□□□ -0.74
DDX55-209ENST00000542286 A0A096LPF7 62 aa10.43□□□□□ -0.74
DDX55-209ENST00000542286 TRGV4A0A0C4DH28 118 aa10.43□□□□□ -0.74
DDX55-209ENST00000542286 UQCRQO14949 82 aa10.43□□□□□ -0.74
DDX55-209ENST00000542286 LINC00643Q86TS7 51 aa10.43□□□□□ -0.74
DDX55-209ENST00000542286 Q9H8V8 135 aa10.43□□□□□ -0.74
DDX55-209ENST00000542286 PF4P02776 101 aa10.43□□□□□ -0.74
DDX55-209ENST00000542286 HERVK_113P63121 156 aa10.43□□□□□ -0.74
DDX55-209ENST00000542286 CSDC2Q9Y534 153 aaKnown RBP10.43□□□□□ -0.74
DDX55-209ENST00000542286 INAFM1C9JVW0 142 aa10.42□□□□□ -0.74
DDX55-209ENST00000542286 KLK5Q9Y337 293 aaPredicted RBP10.42□□□□□ -0.74
DDX55-209ENST00000542286 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
DDX55-209ENST00000542286 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
DDX55-209ENST00000542286 C16orf74Q96GX8 76 aa10.4□□□□□ -0.74
DDX55-209ENST00000542286 IGLV4-60A0A075B6I1 120 aa10.4□□□□□ -0.74
DDX55-209ENST00000542286 SMIM1B2RUZ4 78 aa10.4□□□□□ -0.74
DDX55-209ENST00000542286 DAZ2Q13117 558 aaKnown RBP10.4□□□□□ -0.74
DDX55-209ENST00000542286 PKD1L1Q8TDX9 2849 aa10.39□□□□□ -0.75
DDX55-209ENST00000542286 UBE2L6O14933 153 aa10.39□□□□□ -0.75
DDX55-209ENST00000542286 DAZ4Q86SG3 579 aaKnown RBP10.38□□□□□ -0.75
DDX55-209ENST00000542286 DAZ3Q9NR90 486 aaKnown RBP10.38□□□□□ -0.75
DDX55-209ENST00000542286 FHL2Q14192 279 aa10.38□□□□□ -0.75
DDX55-209ENST00000542286 TRBV10-1A0A0K0K1A3 114 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 COX7A2LO14548 114 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 TIMM17BO60830 172 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 TMEM243Q9BU79 118 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 IGLV5-45A0A087WSX0 123 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 TIRAPP58753 221 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 CLPSL2Q6UWE3 100 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 SOSTDC1Q6X4U4 206 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 TOMM7Q9P0U1 55 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 ATP5G1P05496 136 aa10.37□□□□□ -0.75
DDX55-209ENST00000542286 BAALC-AS2P0C853 105 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms