RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 GFRA4Q9GZZ7 299 aa2.6□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 ZNF831Q5JPB2 1677 aa2.6□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 CR1P17927 2039 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 COL5A1P20908 1838 aaPredicted RBP2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 ARFGEF3Q5TH69 2177 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 DNAJC13O75165 2243 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 IGHV3-64A0A075B6Q5 118 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 K7EMI3 77 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 IGLV1-44P01699 117 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 IGLV1-47P01700 117 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 IGLV7-43P04211 117 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 P0C880 135 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 SPAG11BQ08648 103 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 NREPQ16612 68 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 MRGPRG-AS1Q2M3A8 158 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 KRTAP24-1Q3LI83 254 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 KPRPQ5T749 579 aaPredicted RBP2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 SPAG11AQ6PDA7 123 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 Q6ZR54 194 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 ZNF833PQ6ZTB9 187 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 SPANXA2-OT1Q8N9U9 137 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 DMAC1Q96GE9 116 aa2.59□□□□□ -1.99
CACNA1C-IT2-201ENST00000541871 MED12Q93074 2177 aa2.59□□□□□ -2
CACNA1C-IT2-201ENST00000541871 PRRC2BQ5JSZ5 2229 aaKnown RBP2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 TRAV12-1A0A0B4J245 112 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LINC01546A6NGU7 62 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 CISD3P0C7P0 127 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 C1orf137Q5JT78 98 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 Q8N377 158 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LINC00167Q96N53 147 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 UBL5Q9BZL1 73 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LINC00846Q9NV44 126 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LHFPL6Q9Y693 200 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 MINOS1-NBL1R4GNA1 71 aa2.58□□□□□ -2
CACNA1C-IT2-201ENST00000541871 NUP214P35658 2090 aaPredicted RBP2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 KIF26BQ2KJY2 2108 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 A0A096LNJ9 63 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 CLPSL1A2RUU4 121 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 SPINK4O60575 86 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LCE1FQ5T754 118 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 KRTAP26-1Q6PEX3 210 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 Q8NAQ8 132 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 FDCSPQ8NFU4 85 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 OBSCN-AS1Q96MR7 158 aa2.57□□□□□ -2
CACNA1C-IT2-201ENST00000541871 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
CACNA1C-IT2-201ENST00000541871 IGLV2-18A0A075B6J9 118 aa2.56□□□□□ -2
CACNA1C-IT2-201ENST00000541871 ERHP84090 104 aaKnown RBP2.56□□□□□ -2
CACNA1C-IT2-201ENST00000541871 ENHOQ6UWT2 76 aa2.56□□□□□ -2
CACNA1C-IT2-201ENST00000541871 DOCK10Q96BY6 2186 aa2.56□□□□□ -2
CACNA1C-IT2-201ENST00000541871 GOLGA4Q13439 2230 aaKnown RBP2.56□□□□□ -2
CACNA1C-IT2-201ENST00000541871 NDUFAF8A1L188 74 aa2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 NUPR2A6NF83 97 aa2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 F8VRH5 84 aa2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 COX6B1P14854 86 aa2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LYPD1Q8N2G4 141 aa2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 RNF5Q99942 180 aa2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 MRPL36Q9P0J6 103 aaKnown RBP2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 TIMM8BQ9Y5J9 83 aaPredicted RBP2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LINC01558Q9Y6Z2 57 aa2.55□□□□□ -2
CACNA1C-IT2-201ENST00000541871 PRRC2AP48634 2157 aaKnown RBP2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 TRBV6-6A0A0A6YYG2 114 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 A0A1B0GU33 70 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 M0R3E3 92 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 PIN1P1O15428 100 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 IGKV1-17P01599 117 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 HIGD2BQ4VC39 106 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 COX7B2Q8TF08 81 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LINC00208Q96KT6 92 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 PRR34Q9NV39 138 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 TMEM14CQ9P0S9 112 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 R4GMQ9 66 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 SPAG17Q6Q759 2223 aa2.54□□□□□ -2
CACNA1C-IT2-201ENST00000541871 TRAV40A0A0B4J280 105 aa2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 A0A0J9YX75 114 aa2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LCE6AA0A183 80 aa2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 LRCOL1A6NCL2 159 aa2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 JMJD7-PLA2G4BH0Y9G9 81 aa2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 GIG44P09565 113 aaPredicted RBP2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 CNBPP62633 177 aaKnown RBP2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 FXYD3Q14802 87 aa2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 TMEM167BQ9NRX6 74 aa2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 PLAC8Q9NZF1 115 aa2.53□□□□□ -2
CACNA1C-IT2-201ENST00000541871 CUL9Q8IWT3 2517 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 ZFHX3Q15911 3703 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 TRAV21A0A0B4J279 112 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 A0A1W2PPR1 153 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 IGIPA6NJ69 53 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 I3L3M4 83 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 M0R135 149 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 M0R1W7 72 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 MGPP08493 103 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 CCL18P55774 89 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 C9orf129Q5T035 196 aaKnown RBP2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 TTTY12Q9BZ98 90 aa2.52□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 H0Y9P7 68 aa2.51□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 UQCR11O14957 56 aa2.51□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 DEFB116Q30KQ4 102 aa2.51□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 WFDC9Q8NEX5 89 aa2.51□□□□□ -2.01
CACNA1C-IT2-201ENST00000541871 LITAFQ99732 161 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms