RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 TRBV30A0A0K0K1B3 111 aa10.88□□□□□ -0.67
CLPTM1-202ENST00000541297 TRBV10-2A0A0K0K1G8 114 aa10.88□□□□□ -0.67
CLPTM1-202ENST00000541297 DEFB135Q30KP9 77 aa10.88□□□□□ -0.67
CLPTM1-202ENST00000541297 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
CLPTM1-202ENST00000541297 CEMP1Q6PRD7 247 aaPredicted RBP10.88□□□□□ -0.67
CLPTM1-202ENST00000541297 TIMM21Q9BVV7 248 aa10.88□□□□□ -0.67
CLPTM1-202ENST00000541297 RS1O15537 224 aa10.87□□□□□ -0.67
CLPTM1-202ENST00000541297 NDUFV3P56181 108 aaKnown RBP10.87□□□□□ -0.67
CLPTM1-202ENST00000541297 KRTAP10-11P60412 298 aa10.87□□□□□ -0.67
CLPTM1-202ENST00000541297 FAM104AQ969W3 186 aa10.87□□□□□ -0.67
CLPTM1-202ENST00000541297 TRAV8-4A0A0B4J246 113 aa10.87□□□□□ -0.67
CLPTM1-202ENST00000541297 CCDC179H3BU77 68 aa10.87□□□□□ -0.67
CLPTM1-202ENST00000541297 RNASE13Q5GAN3 156 aaKnown RBP10.87□□□□□ -0.67
CLPTM1-202ENST00000541297 GAGE7O76087 117 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 GAGE12FP0CL80 117 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 GAGE12GP0CL81 117 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 GAGE12IP0CL82 117 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 IGHV4-30-4P0DP06 118 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 RPL13AP40429 203 aaKnown RBP10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 NPC2P61916 151 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 DAZ2Q13117 558 aaKnown RBP10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 A8MZ25 164 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 UBE2WQ96B02 151 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
CLPTM1-202ENST00000541297 TTC32Q5I0X7 151 aa10.85□□□□□ -0.67
CLPTM1-202ENST00000541297 C2orf82Q6UX34 121 aa10.85□□□□□ -0.67
CLPTM1-202ENST00000541297 LINC01600Q96MT4 127 aa10.85□□□□□ -0.67
CLPTM1-202ENST00000541297 TRGV2A0A075B6R0 118 aa10.85□□□□□ -0.67
CLPTM1-202ENST00000541297 H7C423 109 aa10.85□□□□□ -0.67
CLPTM1-202ENST00000541297 MRPS36P82909 103 aaKnown RBP10.85□□□□□ -0.67
CLPTM1-202ENST00000541297 C15orf53Q8NAA6 179 aa10.85□□□□□ -0.67
CLPTM1-202ENST00000541297 X6R8D5 127 aa10.85□□□□□ -0.67
CLPTM1-202ENST00000541297 APOC4P55056 127 aa10.84□□□□□ -0.67
CLPTM1-202ENST00000541297 IFITM1P13164 125 aa10.84□□□□□ -0.67
CLPTM1-202ENST00000541297 NDUFA12Q9UI09 145 aa10.84□□□□□ -0.67
CLPTM1-202ENST00000541297 IGHV1-58A0A0C4DH39 117 aa10.83□□□□□ -0.68
CLPTM1-202ENST00000541297 PYGO1Q9Y3Y4 419 aa10.83□□□□□ -0.68
CLPTM1-202ENST00000541297 TNFRSF18Q9Y5U5 241 aa10.83□□□□□ -0.68
CLPTM1-202ENST00000541297 NOTCH1P46531 2555 aa10.83□□□□□ -0.68
CLPTM1-202ENST00000541297 DEFB4AO15263 64 aa10.83□□□□□ -0.68
CLPTM1-202ENST00000541297 KIR2DL5BQ8NHK3 375 aa10.83□□□□□ -0.68
CLPTM1-202ENST00000541297 CLEC2BQ92478 149 aa10.83□□□□□ -0.68
CLPTM1-202ENST00000541297 OVOL2Q9BRP0 275 aa10.82□□□□□ -0.68
CLPTM1-202ENST00000541297 SPANXDQ9BXN6 97 aa10.82□□□□□ -0.68
CLPTM1-202ENST00000541297 EDA2RQ9HAV5 297 aa10.82□□□□□ -0.68
CLPTM1-202ENST00000541297 SPANXCQ9NY87 97 aa10.82□□□□□ -0.68
CLPTM1-202ENST00000541297 DEFB130BP0DP73 79 aa10.81□□□□□ -0.68
CLPTM1-202ENST00000541297 DEFB130AP0DP74 79 aa10.81□□□□□ -0.68
CLPTM1-202ENST00000541297 IGHV3-38A0A0C4DH36 116 aa10.81□□□□□ -0.68
CLPTM1-202ENST00000541297 MIAQ16674 131 aa10.81□□□□□ -0.68
CLPTM1-202ENST00000541297 Q6Q795 121 aa10.81□□□□□ -0.68
CLPTM1-202ENST00000541297 GAGE12JA6NER3 117 aa10.8□□□□□ -0.68
CLPTM1-202ENST00000541297 COX6CP09669 75 aa10.8□□□□□ -0.68
CLPTM1-202ENST00000541297 GAGE4Q13068 117 aa10.8□□□□□ -0.68
CLPTM1-202ENST00000541297 VSIG2Q96IQ7 327 aa10.8□□□□□ -0.68
CLPTM1-202ENST00000541297 EGFEM1PQ0D2K5 195 aa10.79□□□□□ -0.68
CLPTM1-202ENST00000541297 DAND5Q8N907 189 aa10.79□□□□□ -0.68
CLPTM1-202ENST00000541297 DNAH3Q8TD57 4116 aa10.79□□□□□ -0.68
CLPTM1-202ENST00000541297 NBEAL1Q6ZS30 2694 aa10.78□□□□□ -0.68
CLPTM1-202ENST00000541297 TINCRA0A1B0GVN0 87 aa10.78□□□□□ -0.68
CLPTM1-202ENST00000541297 H3BT86 120 aa10.78□□□□□ -0.68
CLPTM1-202ENST00000541297 SMIM9A6NGZ8 99 aa10.78□□□□□ -0.68
CLPTM1-202ENST00000541297 K7EQD1 137 aa10.78□□□□□ -0.68
CLPTM1-202ENST00000541297 LST1O00453 97 aa10.78□□□□□ -0.68
CLPTM1-202ENST00000541297 PPDPFQ9H3Y8 114 aa10.78□□□□□ -0.68
CLPTM1-202ENST00000541297 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
CLPTM1-202ENST00000541297 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
CLPTM1-202ENST00000541297 TRGV4A0A0C4DH28 118 aa10.77□□□□□ -0.69
CLPTM1-202ENST00000541297 IGHV4-28A0A0C4DH34 117 aa10.77□□□□□ -0.69
CLPTM1-202ENST00000541297 MDFIQ99750 246 aa10.77□□□□□ -0.69
CLPTM1-202ENST00000541297 CHCHD7Q9BUK0 85 aa10.77□□□□□ -0.69
CLPTM1-202ENST00000541297 UBE2D4Q9Y2X8 147 aa10.77□□□□□ -0.69
CLPTM1-202ENST00000541297 FAM222AQ5U5X8 452 aa10.76□□□□□ -0.69
CLPTM1-202ENST00000541297 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
CLPTM1-202ENST00000541297 LOC100131303A0A0U1RQF7 123 aa10.75□□□□□ -0.69
CLPTM1-202ENST00000541297 PRB2P02812 416 aaPredicted RBP10.74□□□□□ -0.69
CLPTM1-202ENST00000541297 CDKN2A-AS1Q9UH64 79 aa10.74□□□□□ -0.69
CLPTM1-202ENST00000541297 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
CLPTM1-202ENST00000541297 FHL2Q14192 279 aa10.73□□□□□ -0.69
CLPTM1-202ENST00000541297 Q8NAQ8 132 aa10.73□□□□□ -0.69
CLPTM1-202ENST00000541297 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
CLPTM1-202ENST00000541297 RETNQ9HD89 108 aa10.73□□□□□ -0.69
CLPTM1-202ENST00000541297 DEFB121Q5J5C9 76 aa10.73□□□□□ -0.69
CLPTM1-202ENST00000541297 SPANXA1Q9NS26 97 aa10.73□□□□□ -0.69
CLPTM1-202ENST00000541297 TRBV10-1A0A0K0K1A3 114 aa10.72□□□□□ -0.69
CLPTM1-202ENST00000541297 MRPL23Q16540 153 aaKnown RBP10.72□□□□□ -0.69
CLPTM1-202ENST00000541297 LINC00612Q8N6U2 182 aa10.72□□□□□ -0.69
CLPTM1-202ENST00000541297 CELA1Q9UNI1 258 aa10.72□□□□□ -0.69
CLPTM1-202ENST00000541297 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
CLPTM1-202ENST00000541297 MIFP14174 115 aa10.71□□□□□ -0.69
CLPTM1-202ENST00000541297 MGAM2Q2M2H8 2515 aa10.71□□□□□ -0.69
CLPTM1-202ENST00000541297 TIMM17BO60830 172 aa10.71□□□□□ -0.69
CLPTM1-202ENST00000541297 TMEM101Q96IK0 257 aa10.71□□□□□ -0.69
CLPTM1-202ENST00000541297 TRBV6-4A0A1B0GX49 114 aa10.71□□□□□ -0.7
CLPTM1-202ENST00000541297 CHCHD5Q9BSY4 110 aa10.71□□□□□ -0.7
CLPTM1-202ENST00000541297 A0A0U1RRA0 63 aa10.7□□□□□ -0.7
CLPTM1-202ENST00000541297 LYRM9A8MSI8 78 aa10.7□□□□□ -0.7
CLPTM1-202ENST00000541297 COX6A2Q02221 97 aa10.7□□□□□ -0.7
CLPTM1-202ENST00000541297 ZNF625Q96I27 306 aaPredicted RBP10.7□□□□□ -0.7
CLPTM1-202ENST00000541297 TENM3Q9P273 2699 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms