RNA–Protein interactions for RNA: ENST00000540636.5

GBGT1-208, Transcript of globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group), humanhuman

TSL 2 BASIC

Gene GBGT1, Length 1,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBGT1-208ENST00000540636 LINC00308Q8TCZ7 52 aa13.17□□□□□ -0.3
GBGT1-208ENST00000540636 ZNF625Q96I27 306 aaPredicted RBP13.17□□□□□ -0.3
GBGT1-208ENST00000540636 NPC2P61916 151 aa13.16□□□□□ -0.3
GBGT1-208ENST00000540636 NOTCH3Q9UM47 2321 aa13.16□□□□□ -0.3
GBGT1-208ENST00000540636 LOC100131303A0A0U1RQF7 123 aa13.15□□□□□ -0.3
GBGT1-208ENST00000540636 PRIMA1Q86XR5 153 aa13.15□□□□□ -0.3
GBGT1-208ENST00000540636 LINC00482Q8N8I6 264 aa13.15□□□□□ -0.3
GBGT1-208ENST00000540636 TRBV6-8A0A0A6YYG3 113 aa13.15□□□□□ -0.3
GBGT1-208ENST00000540636 TRBV10-2A0A0K0K1G8 114 aa13.15□□□□□ -0.3
GBGT1-208ENST00000540636 RPL13AP40429 203 aaKnown RBP13.14□□□□□ -0.31
GBGT1-208ENST00000540636 TMEM262E9PQX1 116 aa13.13□□□□□ -0.31
GBGT1-208ENST00000540636 LINC00612Q8N6U2 182 aa13.13□□□□□ -0.31
GBGT1-208ENST00000540636 DAND5Q8N907 189 aa13.13□□□□□ -0.31
GBGT1-208ENST00000540636 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
GBGT1-208ENST00000540636 SMIM9A6NGZ8 99 aa13.12□□□□□ -0.31
GBGT1-208ENST00000540636 KRTAP10-3P60369 221 aa13.12□□□□□ -0.31
GBGT1-208ENST00000540636 CDIP1Q9H305 208 aa13.12□□□□□ -0.31
GBGT1-208ENST00000540636 MTORP42345 2549 aa13.12□□□□□ -0.31
GBGT1-208ENST00000540636 ANK3Q12955 4377 aaKnown RBP13.12□□□□□ -0.31
GBGT1-208ENST00000540636 SETD2Q9BYW2 2564 aaPredicted RBP13.11□□□□□ -0.31
GBGT1-208ENST00000540636 GAGE6Q13070 117 aa13.11□□□□□ -0.31
GBGT1-208ENST00000540636 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
GBGT1-208ENST00000540636 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
GBGT1-208ENST00000540636 H3BT86 120 aa13.1□□□□□ -0.31
GBGT1-208ENST00000540636 LST1O00453 97 aa13.09□□□□□ -0.31
GBGT1-208ENST00000540636 CHCHD5Q9BSY4 110 aa13.09□□□□□ -0.31
GBGT1-208ENST00000540636 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
GBGT1-208ENST00000540636 CRLF1O75462 422 aa13.09□□□□□ -0.31
GBGT1-208ENST00000540636 SMR3AQ99954 134 aa13.09□□□□□ -0.31
GBGT1-208ENST00000540636 SETXQ7Z333 2677 aaKnown RBP13.08□□□□□ -0.32
GBGT1-208ENST00000540636 COX7B2Q8TF08 81 aa13.08□□□□□ -0.32
GBGT1-208ENST00000540636 LY6G6DO95868 133 aa13.07□□□□□ -0.32
GBGT1-208ENST00000540636 DEFB130BP0DP73 79 aa13.07□□□□□ -0.32
GBGT1-208ENST00000540636 DEFB130AP0DP74 79 aa13.07□□□□□ -0.32
GBGT1-208ENST00000540636 C9orf66Q5T8R8 295 aa13.07□□□□□ -0.32
GBGT1-208ENST00000540636 C2orf82Q6UX34 121 aa13.07□□□□□ -0.32
GBGT1-208ENST00000540636 NTN5Q8WTR8 489 aaPredicted RBP13.07□□□□□ -0.32
GBGT1-208ENST00000540636 IGLV4-60A0A075B6I1 120 aa13.06□□□□□ -0.32
GBGT1-208ENST00000540636 SOSTDC1Q6X4U4 206 aa13.06□□□□□ -0.32
GBGT1-208ENST00000540636 C2CD3Q4AC94 2353 aa13.06□□□□□ -0.32
GBGT1-208ENST00000540636 IGHV3OR16-9A0A0B4J2B5 98 aa13.05□□□□□ -0.32
GBGT1-208ENST00000540636 A0A0U1RRA0 63 aa13.05□□□□□ -0.32
GBGT1-208ENST00000540636 X6R8D5 127 aa13.05□□□□□ -0.32
GBGT1-208ENST00000540636 ITPR2Q14571 2701 aa13.05□□□□□ -0.32
GBGT1-208ENST00000540636 SHISA2Q6UWI4 295 aa13.04□□□□□ -0.32
GBGT1-208ENST00000540636 CLEC2BQ92478 149 aa13.04□□□□□ -0.32
GBGT1-208ENST00000540636 CUBNO60494 3623 aa13.04□□□□□ -0.32
GBGT1-208ENST00000540636 A0A087WZ39 114 aa13.03□□□□□ -0.32
GBGT1-208ENST00000540636 UBE2WQ96B02 151 aa13.03□□□□□ -0.32
GBGT1-208ENST00000540636 LYRM9A8MSI8 78 aa13.03□□□□□ -0.32
GBGT1-208ENST00000540636 COX7A2LO14548 114 aa13.03□□□□□ -0.32
GBGT1-208ENST00000540636 GYPEP15421 78 aa13.03□□□□□ -0.32
GBGT1-208ENST00000540636 PRO0255Q9UI72 69 aa13.03□□□□□ -0.32
GBGT1-208ENST00000540636 UNC79Q9P2D8 2635 aa13.02□□□□□ -0.32
GBGT1-208ENST00000540636 A0A1B0GUV1 79 aa13.02□□□□□ -0.32
GBGT1-208ENST00000540636 FAM222AQ5U5X8 452 aa13.01□□□□□ -0.33
GBGT1-208ENST00000540636 TRAV13-2A0A0B4J235 113 aa13.01□□□□□ -0.33
GBGT1-208ENST00000540636 IGKV3OR2-268A0A0C4DH90 116 aa13.01□□□□□ -0.33
GBGT1-208ENST00000540636 LINC00959A0A1B0GUT2 108 aa13□□□□□ -0.33
GBGT1-208ENST00000540636 TOMM7Q9P0U1 55 aa13□□□□□ -0.33
GBGT1-208ENST00000540636 IBA57-AS1B1ANH7 110 aa13□□□□□ -0.33
GBGT1-208ENST00000540636 XGP55808 180 aa13□□□□□ -0.33
GBGT1-208ENST00000540636 TEX49A0A1B0GTD5 131 aa12.99□□□□□ -0.33
GBGT1-208ENST00000540636 GCN1Q92616 2671 aaKnown RBP12.98□□□□□ -0.33
GBGT1-208ENST00000540636 MT-ATP8P03928 68 aa12.98□□□□□ -0.33
GBGT1-208ENST00000540636 APOC4P55056 127 aa12.98□□□□□ -0.33
GBGT1-208ENST00000540636 SS18Q15532 418 aa12.98□□□□□ -0.33
GBGT1-208ENST00000540636 LINC01561Q8N1V8 128 aa12.98□□□□□ -0.33
GBGT1-208ENST00000540636 MIR7-3HGQ8N6C7 128 aa12.98□□□□□ -0.33
GBGT1-208ENST00000540636 TRAV8-4A0A0B4J246 113 aa12.96□□□□□ -0.33
GBGT1-208ENST00000540636 TRACP01848 142 aa12.96□□□□□ -0.33
GBGT1-208ENST00000540636 DEFB121Q5J5C9 76 aa12.96□□□□□ -0.33
GBGT1-208ENST00000540636 PAX4O43316 350 aa12.96□□□□□ -0.34
GBGT1-208ENST00000540636 CRPP02741 224 aa12.96□□□□□ -0.34
GBGT1-208ENST00000540636 LINC00158P58513 81 aa12.96□□□□□ -0.34
GBGT1-208ENST00000540636 C5orf38Q86SI9 138 aa12.95□□□□□ -0.34
GBGT1-208ENST00000540636 SND1-IT1Q9HBX3 110 aa12.95□□□□□ -0.34
GBGT1-208ENST00000540636 A0A1B0GV72 72 aa12.94□□□□□ -0.34
GBGT1-208ENST00000540636 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
GBGT1-208ENST00000540636 INAFM1C9JVW0 142 aa12.94□□□□□ -0.34
GBGT1-208ENST00000540636 RPL28P46779 137 aaKnown RBP12.94□□□□□ -0.34
GBGT1-208ENST00000540636 NIPBLQ6KC79 2804 aaeCLIP12.93□□□□□ -0.34
GBGT1-208ENST00000540636 TRAV26-1A0A087WT03 109 aa12.92□□□□□ -0.34
GBGT1-208ENST00000540636 FAM240AA0A1B0GVK7 77 aa12.92□□□□□ -0.34
GBGT1-208ENST00000540636 C6orf226Q5I0X4 101 aa12.92□□□□□ -0.34
GBGT1-208ENST00000540636 Q8IZM0 81 aa12.92□□□□□ -0.34
GBGT1-208ENST00000540636 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
GBGT1-208ENST00000540636 IGKV2-28A0A075B6P5 120 aa12.9□□□□□ -0.35
GBGT1-208ENST00000540636 IGKV2D-28P01615 120 aa12.9□□□□□ -0.35
GBGT1-208ENST00000540636 CCL18P55774 89 aa12.9□□□□□ -0.35
GBGT1-208ENST00000540636 CITED1Q99966 193 aa12.9□□□□□ -0.35
GBGT1-208ENST00000540636 FN1P02751 2386 aaKnown RBP12.89□□□□□ -0.35
GBGT1-208ENST00000540636 MIFP14174 115 aa12.89□□□□□ -0.35
GBGT1-208ENST00000540636 XCL1P47992 114 aa12.89□□□□□ -0.35
GBGT1-208ENST00000540636 DAD1P61803 113 aa12.89□□□□□ -0.35
GBGT1-208ENST00000540636 LINC00337Q8N6G1 96 aa12.89□□□□□ -0.35
GBGT1-208ENST00000540636 SPATA3Q8NHX4 192 aa12.89□□□□□ -0.35
GBGT1-208ENST00000540636 IGHV4-28A0A0C4DH34 117 aa12.88□□□□□ -0.35
GBGT1-208ENST00000540636 SNCGO76070 127 aa12.88□□□□□ -0.35
GBGT1-208ENST00000540636 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms