RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 RAB5AP20339 215 aa13.11□□□□□ -0.31
CHFR-217ENST00000540537 OPRPNQ99935 248 aaPredicted RBP13.11□□□□□ -0.31
CHFR-217ENST00000540537 MT-ND4LP03901 98 aa13.1□□□□□ -0.31
CHFR-217ENST00000540537 SPAG11BQ08648 103 aa13.1□□□□□ -0.31
CHFR-217ENST00000540537 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
CHFR-217ENST00000540537 LAMTOR2Q9Y2Q5 125 aa13.1□□□□□ -0.31
CHFR-217ENST00000540537 IGHV3OR16-9A0A0B4J2B5 98 aa13.09□□□□□ -0.31
CHFR-217ENST00000540537 IFITM10A6NMD0 228 aa13.09□□□□□ -0.31
CHFR-217ENST00000540537 PRSS47A8MTI9 375 aa13.09□□□□□ -0.31
CHFR-217ENST00000540537 GAGE2BQ13066 116 aa13.09□□□□□ -0.31
CHFR-217ENST00000540537 IFI27P40305 119 aaPredicted RBP13.08□□□□□ -0.32
CHFR-217ENST00000540537 PYGO1Q9Y3Y4 419 aa13.08□□□□□ -0.32
CHFR-217ENST00000540537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.07□□□□□ -0.32
CHFR-217ENST00000540537 RNF151Q2KHN1 245 aa13.07□□□□□ -0.32
CHFR-217ENST00000540537 TNXBP22105 4242 aa13.06□□□□□ -0.32
CHFR-217ENST00000540537 F8WDY8 70 aa13.06□□□□□ -0.32
CHFR-217ENST00000540537 ORAOV1Q8WV07 137 aa13.06□□□□□ -0.32
CHFR-217ENST00000540537 MAP1LC3AQ9H492 121 aa13.05□□□□□ -0.32
CHFR-217ENST00000540537 PLA2G2DQ9UNK4 145 aa13.05□□□□□ -0.32
CHFR-217ENST00000540537 Q6ZRP5 223 aa13.04□□□□□ -0.32
CHFR-217ENST00000540537 MRPL35Q9NZE8 188 aaKnown RBP13.04□□□□□ -0.32
CHFR-217ENST00000540537 IGLV4-3A0A075B6K6 122 aa13.03□□□□□ -0.32
CHFR-217ENST00000540537 TGIF2-C20orf24A0A0A6YYL0 155 aa13.03□□□□□ -0.32
CHFR-217ENST00000540537 LOC389332A0A1B0GUA5 103 aa13.03□□□□□ -0.32
CHFR-217ENST00000540537 RPL18AQ02543 176 aaKnown RBP13.03□□□□□ -0.32
CHFR-217ENST00000540537 CLLU1Q5K131 121 aa13.03□□□□□ -0.32
CHFR-217ENST00000540537 A0A1W2PNN7 141 aa13.02□□□□□ -0.33
CHFR-217ENST00000540537 NDUFA1O15239 70 aa13.02□□□□□ -0.33
CHFR-217ENST00000540537 Q8N8P6 123 aa13.02□□□□□ -0.33
CHFR-217ENST00000540537 TMEM141Q96I45 108 aa13.02□□□□□ -0.33
CHFR-217ENST00000540537 A0A0J9YXV3 536 aa13.01□□□□□ -0.33
CHFR-217ENST00000540537 SPINK6Q6UWN8 80 aa13.01□□□□□ -0.33
CHFR-217ENST00000540537 A0A087WZ39 114 aa13□□□□□ -0.33
CHFR-217ENST00000540537 C9orf116Q5BN46 136 aaPredicted RBP13□□□□□ -0.33
CHFR-217ENST00000540537 LINC00242Q5T6M2 205 aa13□□□□□ -0.33
CHFR-217ENST00000540537 LINC01600Q96MT4 127 aa13□□□□□ -0.33
CHFR-217ENST00000540537 IMMP2LQ96T52 175 aa13□□□□□ -0.33
CHFR-217ENST00000540537 CYSLTR1Q9Y271 337 aa13□□□□□ -0.33
CHFR-217ENST00000540537 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
CHFR-217ENST00000540537 K7EMI3 77 aa12.98□□□□□ -0.33
CHFR-217ENST00000540537 ORMDL2Q53FV1 153 aa12.98□□□□□ -0.33
CHFR-217ENST00000540537 C2orf66Q6UXQ4 117 aa12.98□□□□□ -0.33
CHFR-217ENST00000540537 TLX1NBP0CAT3 122 aa12.97□□□□□ -0.33
CHFR-217ENST00000540537 SRSF9Q13242 221 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHFR-217ENST00000540537 C10orf25Q5T742 122 aa12.97□□□□□ -0.33
CHFR-217ENST00000540537 C2orf88Q9BSF0 95 aa12.97□□□□□ -0.33
CHFR-217ENST00000540537 NPSP0C0P6 89 aa12.96□□□□□ -0.33
CHFR-217ENST00000540537 UBE2D1P51668 147 aa12.96□□□□□ -0.33
CHFR-217ENST00000540537 KIAA0087Q14695 138 aa12.96□□□□□ -0.33
CHFR-217ENST00000540537 UQCC3Q6UW78 93 aa12.96□□□□□ -0.33
CHFR-217ENST00000540537 UNQ6190/PRO20217Q6UXQ8 127 aa12.96□□□□□ -0.33
CHFR-217ENST00000540537 Q6ZN92 141 aa12.96□□□□□ -0.33
CHFR-217ENST00000540537 CTDSP1Q9GZU7 261 aa12.96□□□□□ -0.33
CHFR-217ENST00000540537 C6orf48Q9UBA6 75 aa12.96□□□□□ -0.33
CHFR-217ENST00000540537 ADCYAP1P18509 176 aa12.95□□□□□ -0.34
CHFR-217ENST00000540537 REG3GQ6UW15 175 aa12.95□□□□□ -0.34
CHFR-217ENST00000540537 LINC01561Q8N1V8 128 aa12.95□□□□□ -0.34
CHFR-217ENST00000540537 AMELXQ99217 191 aa12.95□□□□□ -0.34
CHFR-217ENST00000540537 NXT2Q9NPJ8 142 aaKnown RBP12.95□□□□□ -0.34
CHFR-217ENST00000540537 LINC00173Q6ZV60 143 aa12.94□□□□□ -0.34
CHFR-217ENST00000540537 PHF5AQ7RTV0 110 aaKnown RBP12.93□□□□□ -0.34
CHFR-217ENST00000540537 VCX2Q9H322 139 aa12.93□□□□□ -0.34
CHFR-217ENST00000540537 TRAV9-1A0A075B6T8 112 aa12.92□□□□□ -0.34
CHFR-217ENST00000540537 TMEM218A2RU14 115 aa12.92□□□□□ -0.34
CHFR-217ENST00000540537 IGIPA6NJ69 53 aa12.92□□□□□ -0.34
CHFR-217ENST00000540537 PSORS1C2Q9UIG4 136 aa12.92□□□□□ -0.34
CHFR-217ENST00000540537 TRBV30A0A0K0K1B3 111 aa12.91□□□□□ -0.34
CHFR-217ENST00000540537 MT-ND6P03923 174 aa12.91□□□□□ -0.34
CHFR-217ENST00000540537 G0S2P27469 103 aa12.91□□□□□ -0.34
CHFR-217ENST00000540537 ZC2HC1BQ5TFG8 222 aa12.91□□□□□ -0.34
CHFR-217ENST00000540537 FAM19A3Q7Z5A8 133 aa12.91□□□□□ -0.34
CHFR-217ENST00000540537 UBR4Q5T4S7 5183 aa12.91□□□□□ -0.34
CHFR-217ENST00000540537 IFITM2Q01629 132 aa12.9□□□□□ -0.34
CHFR-217ENST00000540537 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
CHFR-217ENST00000540537 FAM168BA1KXE4 195 aa12.88□□□□□ -0.35
CHFR-217ENST00000540537 KIAA1644Q3SXP7 199 aa12.88□□□□□ -0.35
CHFR-217ENST00000540537 GAGE2EQ4V326 116 aa12.88□□□□□ -0.35
CHFR-217ENST00000540537 C2orf82Q6UX34 121 aa12.88□□□□□ -0.35
CHFR-217ENST00000540537 PACRGQ96M98 296 aaPredicted RBP12.88□□□□□ -0.35
CHFR-217ENST00000540537 TIMM17AQ99595 171 aa12.88□□□□□ -0.35
CHFR-217ENST00000540537 GAGE2DQ9UEU5 116 aa12.88□□□□□ -0.35
CHFR-217ENST00000540537 KRTAP10-8P60410 259 aa12.87□□□□□ -0.35
CHFR-217ENST00000540537 C1orf137Q5JT78 98 aa12.87□□□□□ -0.35
CHFR-217ENST00000540537 TOMM6Q96B49 74 aa12.87□□□□□ -0.35
CHFR-217ENST00000540537 SEC11CQ9BY50 192 aa12.87□□□□□ -0.35
CHFR-217ENST00000540537 SEC11AP67812 179 aa12.86□□□□□ -0.35
CHFR-217ENST00000540537 NDUFC2-KCTD14E9PQ53 114 aa12.85□□□□□ -0.35
CHFR-217ENST00000540537 PRSS2P07478 247 aa12.85□□□□□ -0.35
CHFR-217ENST00000540537 HERVK_113P63121 156 aa12.85□□□□□ -0.35
CHFR-217ENST00000540537 FAM19A5Q7Z5A7 132 aaPredicted RBP12.85□□□□□ -0.35
CHFR-217ENST00000540537 S100PP25815 95 aa12.84□□□□□ -0.35
CHFR-217ENST00000540537 Q8IZM0 81 aa12.84□□□□□ -0.35
CHFR-217ENST00000540537 GNB1LQ9BYB4 327 aa12.84□□□□□ -0.35
CHFR-217ENST00000540537 TOMM7Q9P0U1 55 aa12.83□□□□□ -0.36
CHFR-217ENST00000540537 CKS1BP61024 79 aa12.82□□□□□ -0.36
CHFR-217ENST00000540537 C6orf226Q5I0X4 101 aa12.82□□□□□ -0.36
CHFR-217ENST00000540537 ERASQ7Z444 233 aa12.82□□□□□ -0.36
CHFR-217ENST00000540537 KRTAP7-1Q8IUC3 87 aa12.82□□□□□ -0.36
CHFR-217ENST00000540537 LINC01546A6NGU7 62 aa12.81□□□□□ -0.36
CHFR-217ENST00000540537 IGLV7-43P04211 117 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms