RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 DEFB121Q5J5C9 76 aa3.67□□□□□ -1.82
MRE11-209ENST00000540013 ATOH7Q8N100 152 aa3.67□□□□□ -1.82
MRE11-209ENST00000540013 Q8NAQ8 132 aa3.67□□□□□ -1.82
MRE11-209ENST00000540013 Q9H521 79 aa3.67□□□□□ -1.82
MRE11-209ENST00000540013 NHP2Q9NX24 153 aaKnown RBP3.67□□□□□ -1.82
MRE11-209ENST00000540013 TIMM9Q9Y5J7 89 aa3.67□□□□□ -1.82
MRE11-209ENST00000540013 DNAH9Q9NYC9 4486 aa3.67□□□□□ -1.82
MRE11-209ENST00000540013 IGHV3OR16-8A0A075B7F1 116 aa3.66□□□□□ -1.82
MRE11-209ENST00000540013 TRBV6-7A0A0A0MS04 114 aa3.66□□□□□ -1.82
MRE11-209ENST00000540013 ZNF705BP0CI00 300 aaPredicted RBP3.66□□□□□ -1.82
MRE11-209ENST00000540013 TPT1P13693 172 aaKnown RBP3.66□□□□□ -1.82
MRE11-209ENST00000540013 HIST1H1BP16401 226 aaKnown RBP3.66□□□□□ -1.82
MRE11-209ENST00000540013 SNRPD3P62318 126 aaKnown RBP3.66□□□□□ -1.82
MRE11-209ENST00000540013 UNQ5815/PRO19632Q6UWF5 114 aa3.66□□□□□ -1.82
MRE11-209ENST00000540013 LYZL1Q6UWQ5 148 aa3.66□□□□□ -1.82
MRE11-209ENST00000540013 SNX29P2Q8IUI4 249 aa3.66□□□□□ -1.82
MRE11-209ENST00000540013 CIB3Q96Q77 187 aaPredicted RBP3.66□□□□□ -1.82
MRE11-209ENST00000540013 LINC00467Q9BRT7 94 aa3.66□□□□□ -1.82
MRE11-209ENST00000540013 FAM103A1Q9BTL3 118 aaKnown RBP3.66□□□□□ -1.82
MRE11-209ENST00000540013 SPANXDQ9BXN6 97 aa3.66□□□□□ -1.82
MRE11-209ENST00000540013 METTL1Q9UBP6 276 aaKnown RBP3.66□□□□□ -1.82
MRE11-209ENST00000540013 TRBV10-2A0A0K0K1G8 114 aa3.65□□□□□ -1.83
MRE11-209ENST00000540013 CCDC179H3BU77 68 aa3.65□□□□□ -1.83
MRE11-209ENST00000540013 TPPP2P59282 170 aa3.65□□□□□ -1.83
MRE11-209ENST00000540013 TMEM258P61165 79 aa3.65□□□□□ -1.83
MRE11-209ENST00000540013 FXYD3Q14802 87 aa3.65□□□□□ -1.83
MRE11-209ENST00000540013 GTF2H5Q6ZYL4 71 aa3.65□□□□□ -1.83
MRE11-209ENST00000540013 ATG5Q9H1Y0 275 aa3.65□□□□□ -1.83
MRE11-209ENST00000540013 STAB2Q8WWQ8 2551 aa3.65□□□□□ -1.83
MRE11-209ENST00000540013 TRBV20-1A0A075B6N2 111 aa3.64□□□□□ -1.83
MRE11-209ENST00000540013 H3BUA1 57 aa3.64□□□□□ -1.83
MRE11-209ENST00000540013 H7C2G1 150 aa3.64□□□□□ -1.83
MRE11-209ENST00000540013 GNRH2O43555 120 aa3.64□□□□□ -1.83
MRE11-209ENST00000540013 SYNGR2O43760 224 aa3.64□□□□□ -1.83
MRE11-209ENST00000540013 TIMM17BO60830 172 aa3.64□□□□□ -1.83
MRE11-209ENST00000540013 SLC35B3Q9H1N7 401 aa3.64□□□□□ -1.83
MRE11-209ENST00000540013 C7orf66A4D0T2 115 aa3.63□□□□□ -1.83
MRE11-209ENST00000540013 C11orf86A6NJI1 115 aa3.63□□□□□ -1.83
MRE11-209ENST00000540013 FNDC10F2Z333 226 aa3.63□□□□□ -1.83
MRE11-209ENST00000540013 SAA1P0DJI8 122 aaPredicted RBP3.63□□□□□ -1.83
MRE11-209ENST00000540013 ZNF22P17026 224 aaPredicted RBP3.63□□□□□ -1.83
MRE11-209ENST00000540013 HSD52Q0P140 79 aa3.63□□□□□ -1.83
MRE11-209ENST00000540013 LINC01545Q5VT33 79 aa3.63□□□□□ -1.83
MRE11-209ENST00000540013 KCNRGQ8N5I3 272 aa3.63□□□□□ -1.83
MRE11-209ENST00000540013 CHCHD1Q96BP2 118 aaKnown RBP3.63□□□□□ -1.83
MRE11-209ENST00000540013 TENM3Q9P273 2699 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 TRAV12-2A0A075B6T6 113 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 KRTAP1-4P0C5Y4 121 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 APELAP0DMC3 54 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 CRYGAP11844 174 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 FABP4P15090 132 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 DEFA5Q01523 94 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 SFT2D1Q8WV19 159 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 USMG5Q96IX5 58 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 RPRMQ9NS64 109 aa3.62□□□□□ -1.83
MRE11-209ENST00000540013 A0A087WXM4 84 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 A0A1B0GVG6 124 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 FAM223BA6NKX1 122 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 LYRM1O43325 122 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 PPYP01298 95 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 CATR1Q13166 79 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 EIF4EBP1Q13541 118 aaPredicted RBP3.61□□□□□ -1.83
MRE11-209ENST00000540013 CLLU1Q5K131 121 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 C10orf55Q5SWW7 151 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 FAM223AQ8IWN6 122 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 VSTM2AQ8TAG5 236 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 COPS9Q8WXC6 57 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 TAS2R8Q9NYW2 309 aa3.61□□□□□ -1.83
MRE11-209ENST00000540013 HUWE1Q7Z6Z7 4374 aaKnown RBP3.61□□□□□ -1.83
MRE11-209ENST00000540013 IGLV1-51P01701 117 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 PRH1P02810 166 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 CD3DP04234 171 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 SLC25A4P12235 298 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 DEFA4P12838 97 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 FXYD4P59646 89 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 TTC9CQ8N5M4 171 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 TMEM167AQ8TBQ9 72 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 S100A16Q96FQ6 103 aaKnown RBP3.6□□□□□ -1.83
MRE11-209ENST00000540013 RETNLBQ9BQ08 111 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 NAA60Q9H7X0 242 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 BET1LQ9NYM9 111 aa3.6□□□□□ -1.83
MRE11-209ENST00000540013 KMT2CQ8NEZ4 4911 aaKnown RBP3.6□□□□□ -1.83
MRE11-209ENST00000540013 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 DNAH7Q8WXX0 4024 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 ZNF90Q03938 601 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 ESRGQ1W209 222 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 LINC00483Q53H64 154 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 Q6ZQT0 140 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 ZNF818PQ6ZRF7 136 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 SBSPONQ8IVN8 264 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 FKBP11Q9NYL4 201 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 HHLA3Q9XRX5 114 aa3.59□□□□□ -1.83
MRE11-209ENST00000540013 E7EUB6 86 aa3.58□□□□□ -1.84
MRE11-209ENST00000540013 PMP2P02689 132 aa3.58□□□□□ -1.84
MRE11-209ENST00000540013 SS18Q15532 418 aa3.58□□□□□ -1.84
MRE11-209ENST00000540013 KLK9Q2XQG4 91 aa3.58□□□□□ -1.84
MRE11-209ENST00000540013 ASB16-AS1Q495Z4 193 aa3.58□□□□□ -1.84
MRE11-209ENST00000540013 COL5A1-AS1Q5SY13 56 aa3.58□□□□□ -1.84
MRE11-209ENST00000540013 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms