RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 C10orf126Q8N4M7 172 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 RNF182Q8N6D2 247 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 SYT8Q8NBV8 401 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 PLEKHB2Q96CS7 222 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 FAM19A4Q96LR4 140 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 ODF3Q96PU9 254 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 TTTY13Q9BZ97 58 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 Q9H8V8 135 aa4.17□□□□□ -1.74
CPSF7-219ENST00000539952 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 IGHV3OR16-12A0A075B7B8 117 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 A0A0J9YX75 114 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 A0A0J9YY99 117 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 TRBV27A0A0K0K1C4 114 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 SDHAF1A6NFY7 115 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 LEPROTO15243 131 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 GAS8-AS1O95177 125 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 SPINK8P0C7L1 97 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 LGALS3P17931 250 aaKnown RBP4.16□□□□□ -1.74
CPSF7-219ENST00000539952 MRPL23Q16540 153 aaKnown RBP4.16□□□□□ -1.74
CPSF7-219ENST00000539952 TTC32Q5I0X7 151 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 Q6Q795 121 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 ZFP2Q6ZN57 461 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 NFE4Q86UQ8 179 aa4.16□□□□□ -1.74
CPSF7-219ENST00000539952 GEMIN7Q9H840 131 aaKnown RBP4.16□□□□□ -1.74
CPSF7-219ENST00000539952 NACAE9PAV3 2078 aa4.15□□□□□ -1.74
CPSF7-219ENST00000539952 TRAV26-2A0A0B4J265 109 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 A0A0B4J2C4 111 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 IGIPA6NJ69 53 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 LYRM9A8MSI8 78 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 J3QQQ9 107 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 TSPAN13O95857 204 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 IGHV3-30P01768 117 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 MGPP08493 103 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 COX6CP09669 75 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 IGHV3-30-5P0DP03 117 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 KRTAP10-2P60368 255 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 ANXA2RQ3ZCQ2 193 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 AMTNQ6UX39 209 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 ZFAND2AQ8N6M9 145 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 C14orf178Q8N769 122 aaPredicted RBP4.15□□□□□ -1.75
CPSF7-219ENST00000539952 MDFICQ9P1T7 246 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 ERG28Q9UKR5 140 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 LINC00588Q9Y4M8 146 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 KIF25-AS1Q9Y6Z4 181 aa4.15□□□□□ -1.75
CPSF7-219ENST00000539952 F5H768 121 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 M0R2P5 195 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 SOCS3O14543 225 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 DUSP14O95147 198 aaKnown RBP4.14□□□□□ -1.75
CPSF7-219ENST00000539952 ATP5G1P05496 136 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 CFC1BP0CG36 223 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 CFC1P0CG37 223 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 RNASE4P34096 147 aaKnown RBP4.14□□□□□ -1.75
CPSF7-219ENST00000539952 XGP55808 180 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 ATXN8Q156A1 80 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 ZNF876PQ49A33 203 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 Q5VSD8 79 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 Q6ZUT4 128 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 COPS9Q8WXC6 57 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 PYGO1Q9Y3Y4 419 aa4.14□□□□□ -1.75
CPSF7-219ENST00000539952 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 TRBV30A0A0K0K1B3 111 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 KLLNB2CW77 178 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 F5H697 171 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 SLC25A20O43772 301 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 TCL1BO95988 128 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 IGKV3-20P01619 116 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 CRYGDP07320 174 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 RNASE3P12724 160 aaKnown RBP4.13□□□□□ -1.75
CPSF7-219ENST00000539952 GAGE5Q13069 117 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 GAGE6Q13070 117 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 PIK3CD-AS1Q5SR53 167 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 TMEM170BQ5T4T1 132 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 SERTAD4-AS1Q5TG53 156 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 C1orf158Q8N1D5 194 aa4.13□□□□□ -1.75
CPSF7-219ENST00000539952 RPL39LQ96EH5 51 aaKnown RBP4.13□□□□□ -1.75
CPSF7-219ENST00000539952 DNAH5Q8TE73 4624 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 TRGV11A0A075B6L2 103 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 TMEM223A0PJW6 202 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 I3L3M4 83 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 GNRH2O43555 120 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 SNCGO76070 127 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 IGHV3-33P01772 117 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 DEFB130BP0DP73 79 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 DEFB130AP0DP74 79 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 IFITM1P13164 125 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 RPL13AP40429 203 aaKnown RBP4.12□□□□□ -1.75
CPSF7-219ENST00000539952 LINC00315P59091 139 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 GAGE2BQ13066 116 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 GAGE2EQ4V326 116 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 ANKRD29Q8N6D5 301 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 PTH2Q96A98 100 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 C20orf173Q96LM9 149 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 UPK3BQ9BT76 320 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 SPANXCQ9NY87 97 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 GAGE2DQ9UEU5 116 aa4.12□□□□□ -1.75
CPSF7-219ENST00000539952 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
CPSF7-219ENST00000539952 A0A0J9YXY3 114 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 TRBV10-2A0A0K0K1G8 114 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 H3BT86 120 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms