RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 TRBV30A0A0K0K1B3 111 aa12.6□□□□□ -0.39
GNE-204ENST00000539208 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
GNE-204ENST00000539208 DEFB130BP0DP73 79 aa12.59□□□□□ -0.39
GNE-204ENST00000539208 DEFB130AP0DP74 79 aa12.59□□□□□ -0.39
GNE-204ENST00000539208 ZNF625Q96I27 306 aaPredicted RBP12.59□□□□□ -0.39
GNE-204ENST00000539208 OTOGQ6ZRI0 2925 aa12.58□□□□□ -0.39
GNE-204ENST00000539208 H7C2G1 150 aa12.57□□□□□ -0.4
GNE-204ENST00000539208 HERV-K104P63124 156 aa12.57□□□□□ -0.4
GNE-204ENST00000539208 GAGE6Q13070 117 aa12.57□□□□□ -0.4
GNE-204ENST00000539208 Q1RN00 199 aa12.57□□□□□ -0.4
GNE-204ENST00000539208 SPATA3Q8NHX4 192 aa12.57□□□□□ -0.4
GNE-204ENST00000539208 M0QXV9 152 aa12.56□□□□□ -0.4
GNE-204ENST00000539208 COPS9Q8WXC6 57 aa12.56□□□□□ -0.4
GNE-204ENST00000539208 HECTD1Q9ULT8 2610 aa12.56□□□□□ -0.4
GNE-204ENST00000539208 CITED1Q99966 193 aa12.56□□□□□ -0.4
GNE-204ENST00000539208 FOXI1Q12951 378 aa12.55□□□□□ -0.4
GNE-204ENST00000539208 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
GNE-204ENST00000539208 CHCHD5Q9BSY4 110 aa12.55□□□□□ -0.4
GNE-204ENST00000539208 PPDPFQ9H3Y8 114 aa12.55□□□□□ -0.4
GNE-204ENST00000539208 IGLV4-60A0A075B6I1 120 aa12.54□□□□□ -0.4
GNE-204ENST00000539208 LYRM9A8MSI8 78 aa12.54□□□□□ -0.4
GNE-204ENST00000539208 NPC2P61916 151 aa12.54□□□□□ -0.4
GNE-204ENST00000539208 TRIAP1O43715 76 aa12.54□□□□□ -0.4
GNE-204ENST00000539208 ATXN8Q156A1 80 aa12.54□□□□□ -0.4
GNE-204ENST00000539208 TEN1Q86WV5 123 aa12.54□□□□□ -0.4
GNE-204ENST00000539208 PRIMA1Q86XR5 153 aa12.54□□□□□ -0.4
GNE-204ENST00000539208 DAND5Q8N907 189 aa12.54□□□□□ -0.4
GNE-204ENST00000539208 PRO0255Q9UI72 69 aa12.53□□□□□ -0.4
GNE-204ENST00000539208 ICOSQ9Y6W8 199 aa12.53□□□□□ -0.4
GNE-204ENST00000539208 GYPEP15421 78 aa12.53□□□□□ -0.4
GNE-204ENST00000539208 APOC4P55056 127 aa12.52□□□□□ -0.4
GNE-204ENST00000539208 LINC01600Q96MT4 127 aa12.52□□□□□ -0.41
GNE-204ENST00000539208 NSD1Q96L73 2696 aaPredicted RBP12.51□□□□□ -0.41
GNE-204ENST00000539208 C2CD3Q4AC94 2353 aa12.51□□□□□ -0.41
GNE-204ENST00000539208 IGHV3OR16-9A0A0B4J2B5 98 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 SLC25A20O43772 301 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 COX6CP09669 75 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 FAM222AQ5U5X8 452 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 PPDPFLQ8WWR9 84 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 A0A1B0GUV1 79 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 MEIG1Q5JSS6 88 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 COX7B2Q8TF08 81 aa12.5□□□□□ -0.41
GNE-204ENST00000539208 C9JAW5 83 aa12.49□□□□□ -0.41
GNE-204ENST00000539208 LINC01620Q4KN68 170 aa12.49□□□□□ -0.41
GNE-204ENST00000539208 RPL13AP40429 203 aaKnown RBP12.49□□□□□ -0.41
GNE-204ENST00000539208 WFDC9Q8NEX5 89 aa12.49□□□□□ -0.41
GNE-204ENST00000539208 A0A087WZ39 114 aa12.48□□□□□ -0.41
GNE-204ENST00000539208 C21orf62-AS1Q17RA5 79 aa12.48□□□□□ -0.41
GNE-204ENST00000539208 WIPF1O43516 503 aa12.47□□□□□ -0.41
GNE-204ENST00000539208 DEFB135Q30KP9 77 aa12.47□□□□□ -0.41
GNE-204ENST00000539208 SOSTDC1Q6X4U4 206 aa12.47□□□□□ -0.41
GNE-204ENST00000539208 CARD19Q96LW7 228 aa12.47□□□□□ -0.41
GNE-204ENST00000539208 LINC00959A0A1B0GUT2 108 aa12.47□□□□□ -0.41
GNE-204ENST00000539208 FN1P02751 2386 aaKnown RBP12.47□□□□□ -0.41
GNE-204ENST00000539208 IGKV3OR2-268A0A0C4DH90 116 aa12.46□□□□□ -0.41
GNE-204ENST00000539208 PAX4O43316 350 aa12.46□□□□□ -0.41
GNE-204ENST00000539208 ANKRD29Q8N6D5 301 aa12.46□□□□□ -0.41
GNE-204ENST00000539208 VWFP04275 2813 aa12.46□□□□□ -0.41
GNE-204ENST00000539208 A0A0U1RRA0 63 aa12.46□□□□□ -0.42
GNE-204ENST00000539208 SIGMAR1Q99720 223 aa12.45□□□□□ -0.42
GNE-204ENST00000539208 NOTCH2Q04721 2471 aa12.45□□□□□ -0.42
GNE-204ENST00000539208 IGHV4-28A0A0C4DH34 117 aa12.45□□□□□ -0.42
GNE-204ENST00000539208 TRBV10-2A0A0K0K1G8 114 aa12.45□□□□□ -0.42
GNE-204ENST00000539208 MIFP14174 115 aa12.44□□□□□ -0.42
GNE-204ENST00000539208 TMEM262E9PQX1 116 aa12.43□□□□□ -0.42
GNE-204ENST00000539208 LST1O00453 97 aa12.43□□□□□ -0.42
GNE-204ENST00000539208 Q8NAQ8 132 aa12.42□□□□□ -0.42
GNE-204ENST00000539208 TOMM7Q9P0U1 55 aa12.42□□□□□ -0.42
GNE-204ENST00000539208 DAD1P61803 113 aa12.42□□□□□ -0.42
GNE-204ENST00000539208 SS18Q15532 418 aa12.42□□□□□ -0.42
GNE-204ENST00000539208 SHISA2Q6UWI4 295 aa12.42□□□□□ -0.42
GNE-204ENST00000539208 LINC01561Q8N1V8 128 aa12.41□□□□□ -0.42
GNE-204ENST00000539208 HIVEP1P15822 2718 aa12.41□□□□□ -0.42
GNE-204ENST00000539208 TENM1Q9UKZ4 2725 aa12.41□□□□□ -0.42
GNE-204ENST00000539208 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.42
GNE-204ENST00000539208 C5orf38Q86SI9 138 aa12.4□□□□□ -0.42
GNE-204ENST00000539208 IBA57-AS1B1ANH7 110 aa12.4□□□□□ -0.42
GNE-204ENST00000539208 DEFB4AO15263 64 aa12.4□□□□□ -0.42
GNE-204ENST00000539208 ATP5G1P05496 136 aa12.39□□□□□ -0.43
GNE-204ENST00000539208 CLEC2BQ92478 149 aa12.39□□□□□ -0.43
GNE-204ENST00000539208 H3BT86 120 aa12.39□□□□□ -0.43
GNE-204ENST00000539208 A0A096LPF7 62 aa12.38□□□□□ -0.43
GNE-204ENST00000539208 MIR7-3HGQ8N6C7 128 aa12.38□□□□□ -0.43
GNE-204ENST00000539208 CDIP1Q9H305 208 aa12.38□□□□□ -0.43
GNE-204ENST00000539208 SPART-AS1P0CW21 52 aa12.37□□□□□ -0.43
GNE-204ENST00000539208 SCGB1A1P11684 91 aa12.37□□□□□ -0.43
GNE-204ENST00000539208 COX7A2LO14548 114 aa12.37□□□□□ -0.43
GNE-204ENST00000539208 IGHV4-30-4P0DP06 118 aa12.37□□□□□ -0.43
GNE-204ENST00000539208 CELA1Q9UNI1 258 aa12.37□□□□□ -0.43
GNE-204ENST00000539208 TRAV13-2A0A0B4J235 113 aa12.36□□□□□ -0.43
GNE-204ENST00000539208 XCL1P47992 114 aa12.36□□□□□ -0.43
GNE-204ENST00000539208 C2orf82Q6UX34 121 aa12.36□□□□□ -0.43
GNE-204ENST00000539208 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
GNE-204ENST00000539208 NBEAL2Q6ZNJ1 2754 aa12.35□□□□□ -0.43
GNE-204ENST00000539208 LINC00158P58513 81 aa12.35□□□□□ -0.43
GNE-204ENST00000539208 Q8IZM0 81 aa12.35□□□□□ -0.43
GNE-204ENST00000539208 C6orf226Q5I0X4 101 aa12.35□□□□□ -0.43
GNE-204ENST00000539208 TEP1Q99973 2627 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms