RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 IMMP2LQ96T52 175 aa10.48□□□□□ -0.73
LTBR-206ENST00000536876 OR10D4PQ8NGN7 298 aa10.47□□□□□ -0.73
LTBR-206ENST00000536876 MRPL35Q9NZE8 188 aaKnown RBP10.47□□□□□ -0.73
LTBR-206ENST00000536876 FAM19A5Q7Z5A7 132 aaPredicted RBP10.46□□□□□ -0.73
LTBR-206ENST00000536876 F8WDY8 70 aa10.45□□□□□ -0.74
LTBR-206ENST00000536876 PPP1R2P9O14990 202 aa10.45□□□□□ -0.74
LTBR-206ENST00000536876 C6orf48Q9UBA6 75 aa10.45□□□□□ -0.74
LTBR-206ENST00000536876 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
LTBR-206ENST00000536876 NDUFA1O15239 70 aa10.44□□□□□ -0.74
LTBR-206ENST00000536876 TLX1NBP0CAT3 122 aa10.44□□□□□ -0.74
LTBR-206ENST00000536876 MRPL51Q4U2R6 128 aaKnown RBP10.44□□□□□ -0.74
LTBR-206ENST00000536876 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
LTBR-206ENST00000536876 KRTAP9-6A0A140TA67 174 aa10.43□□□□□ -0.74
LTBR-206ENST00000536876 UBE2D1P51668 147 aa10.43□□□□□ -0.74
LTBR-206ENST00000536876 TMEM241Q24JQ0 296 aa10.43□□□□□ -0.74
LTBR-206ENST00000536876 FAM104BQ5XKR9 115 aa10.43□□□□□ -0.74
LTBR-206ENST00000536876 TIMM21Q9BVV7 248 aa10.43□□□□□ -0.74
LTBR-206ENST00000536876 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
LTBR-206ENST00000536876 RPL23P62829 140 aaKnown RBP10.42□□□□□ -0.74
LTBR-206ENST00000536876 UNQ6190/PRO20217Q6UXQ8 127 aa10.42□□□□□ -0.74
LTBR-206ENST00000536876 SMDT1Q9H4I9 107 aa10.42□□□□□ -0.74
LTBR-206ENST00000536876 MUC17Q685J3 4493 aa10.42□□□□□ -0.74
LTBR-206ENST00000536876 A0A0U1RQV1 116 aa10.41□□□□□ -0.74
LTBR-206ENST00000536876 TCAPO15273 167 aa10.41□□□□□ -0.74
LTBR-206ENST00000536876 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
LTBR-206ENST00000536876 UBE2BP63146 152 aa10.41□□□□□ -0.74
LTBR-206ENST00000536876 IFITM2Q01629 132 aa10.41□□□□□ -0.74
LTBR-206ENST00000536876 ADIRFQ15847 76 aa10.41□□□□□ -0.74
LTBR-206ENST00000536876 C20orf78Q9BR46 151 aa10.41□□□□□ -0.74
LTBR-206ENST00000536876 SMIM27A0A1W2PRY6 76 aa10.4□□□□□ -0.74
LTBR-206ENST00000536876 M0QXV9 152 aa10.4□□□□□ -0.74
LTBR-206ENST00000536876 FAM74A3Q4VXF1 159 aa10.4□□□□□ -0.74
LTBR-206ENST00000536876 TRBV24-1A0A075B6N3 115 aa10.39□□□□□ -0.75
LTBR-206ENST00000536876 LINC00862A6NCI5 91 aa10.39□□□□□ -0.75
LTBR-206ENST00000536876 CKS2P33552 79 aa10.39□□□□□ -0.75
LTBR-206ENST00000536876 RPL13AP40429 203 aaKnown RBP10.39□□□□□ -0.75
LTBR-206ENST00000536876 RPL32P62910 135 aaKnown RBP10.39□□□□□ -0.75
LTBR-206ENST00000536876 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
LTBR-206ENST00000536876 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
LTBR-206ENST00000536876 C9JQL5 133 aa10.38□□□□□ -0.75
LTBR-206ENST00000536876 TNFRSF6BO95407 300 aa10.38□□□□□ -0.75
LTBR-206ENST00000536876 RAB14P61106 215 aa10.38□□□□□ -0.75
LTBR-206ENST00000536876 KIAA0087Q14695 138 aa10.38□□□□□ -0.75
LTBR-206ENST00000536876 SMIM2Q9BVW6 85 aa10.38□□□□□ -0.75
LTBR-206ENST00000536876 A0A1B0GW15 77 aa10.37□□□□□ -0.75
LTBR-206ENST00000536876 C9orf129Q5T035 196 aaKnown RBP10.37□□□□□ -0.75
LTBR-206ENST00000536876 SPANXA1Q9NS26 97 aa10.37□□□□□ -0.75
LTBR-206ENST00000536876 NAT8Q9UHE5 227 aa10.37□□□□□ -0.75
LTBR-206ENST00000536876 D6R8Y8 96 aa10.36□□□□□ -0.75
LTBR-206ENST00000536876 HBBP68871 147 aa10.36□□□□□ -0.75
LTBR-206ENST00000536876 CARHSP1Q9Y2V2 147 aaKnown RBP10.36□□□□□ -0.75
LTBR-206ENST00000536876 TGIF2-C20orf24A0A0A6YYL0 155 aa10.35□□□□□ -0.75
LTBR-206ENST00000536876 IFITM10A6NMD0 228 aa10.35□□□□□ -0.75
LTBR-206ENST00000536876 NPYP01303 97 aa10.35□□□□□ -0.75
LTBR-206ENST00000536876 MRPS36P82909 103 aaKnown RBP10.35□□□□□ -0.75
LTBR-206ENST00000536876 MRPL54Q6P161 138 aaKnown RBP10.35□□□□□ -0.75
LTBR-206ENST00000536876 A0A087X002 238 aa10.33□□□□□ -0.76
LTBR-206ENST00000536876 A0A1B0GXF2 115 aa10.33□□□□□ -0.76
LTBR-206ENST00000536876 TSPAN13O95857 204 aa10.33□□□□□ -0.76
LTBR-206ENST00000536876 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
LTBR-206ENST00000536876 CLLU1Q5K131 121 aa10.33□□□□□ -0.76
LTBR-206ENST00000536876 F8W036 122 aa10.32□□□□□ -0.76
LTBR-206ENST00000536876 S100A8P05109 93 aa10.32□□□□□ -0.76
LTBR-206ENST00000536876 C2orf82Q6UX34 121 aa10.32□□□□□ -0.76
LTBR-206ENST00000536876 PACRGQ96M98 296 aaPredicted RBP10.32□□□□□ -0.76
LTBR-206ENST00000536876 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
LTBR-206ENST00000536876 ZNF861PO60384 105 aa10.31□□□□□ -0.76
LTBR-206ENST00000536876 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
LTBR-206ENST00000536876 PEA15Q15121 130 aa10.3□□□□□ -0.76
LTBR-206ENST00000536876 PPBPP02775 128 aa10.29□□□□□ -0.76
LTBR-206ENST00000536876 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
LTBR-206ENST00000536876 RAB5AP20339 215 aa10.28□□□□□ -0.76
LTBR-206ENST00000536876 ORMDL3Q8N138 153 aa10.28□□□□□ -0.76
LTBR-206ENST00000536876 IGLV4-3A0A075B6K6 122 aa10.27□□□□□ -0.77
LTBR-206ENST00000536876 LINC00242Q5T6M2 205 aa10.27□□□□□ -0.77
LTBR-206ENST00000536876 NUPR1O60356 82 aa10.26□□□□□ -0.77
LTBR-206ENST00000536876 TMEM136Q6ZRR5 245 aa10.26□□□□□ -0.77
LTBR-206ENST00000536876 PRELID3AQ96N28 172 aa10.26□□□□□ -0.77
LTBR-206ENST00000536876 PRSS2P07478 247 aa10.25□□□□□ -0.77
LTBR-206ENST00000536876 ATP5L2Q7Z4Y8 100 aa10.25□□□□□ -0.77
LTBR-206ENST00000536876 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
LTBR-206ENST00000536876 PYGO1Q9Y3Y4 419 aa10.25□□□□□ -0.77
LTBR-206ENST00000536876 LBHQ53QV2 105 aaPredicted RBP10.24□□□□□ -0.77
LTBR-206ENST00000536876 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
LTBR-206ENST00000536876 C22orf24Q9Y442 160 aa10.24□□□□□ -0.77
LTBR-206ENST00000536876 KRTAP13-2Q52LG2 175 aa10.23□□□□□ -0.77
LTBR-206ENST00000536876 TEX43Q6ZNM6 134 aa10.23□□□□□ -0.77
LTBR-206ENST00000536876 COMMD7Q86VX2 200 aa10.23□□□□□ -0.77
LTBR-206ENST00000536876 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
LTBR-206ENST00000536876 LINC00469Q8N7U9 141 aa10.23□□□□□ -0.77
LTBR-206ENST00000536876 RETNLBQ9BQ08 111 aa10.23□□□□□ -0.77
LTBR-206ENST00000536876 C2orf88Q9BSF0 95 aa10.23□□□□□ -0.77
LTBR-206ENST00000536876 CKS1BP61024 79 aa10.22□□□□□ -0.77
LTBR-206ENST00000536876 TOMM7Q9P0U1 55 aa10.22□□□□□ -0.77
LTBR-206ENST00000536876 LOC389332A0A1B0GUA5 103 aa10.21□□□□□ -0.77
LTBR-206ENST00000536876 C6orf226Q5I0X4 101 aa10.21□□□□□ -0.77
LTBR-206ENST00000536876 Q6ZN92 141 aa10.21□□□□□ -0.77
LTBR-206ENST00000536876 LINC00173Q6ZV60 143 aa10.21□□□□□ -0.77
LTBR-206ENST00000536876 PRSS47A8MTI9 375 aa10.2□□□□□ -0.78
LTBR-206ENST00000536876 ZC2HC1BQ5TFG8 222 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms