RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-233	ENST00000534636	ORAOV1	Q8WV07	137 aa		11.43	□□□□□ -0.58
CTSB-233	ENST00000534636	SMDT1	Q9H4I9	107 aa		11.43	□□□□□ -0.58
CTSB-233	ENST00000534636		A0A1W2PNN7	141 aa		11.42	□□□□□ -0.58
CTSB-233	ENST00000534636	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
CTSB-233	ENST00000534636	RNF151	Q2KHN1	245 aa		11.42	□□□□□ -0.58
CTSB-233	ENST00000534636	IFITM10	A6NMD0	228 aa		11.41	□□□□□ -0.58
CTSB-233	ENST00000534636		C9JQL5	133 aa		11.41	□□□□□ -0.58
CTSB-233	ENST00000534636		F8WDY8	70 aa		11.41	□□□□□ -0.58
CTSB-233	ENST00000534636	PPBP	P02775	128 aa		11.41	□□□□□ -0.58
CTSB-233	ENST00000534636	OPRPN	Q99935	248 aa	Predicted RBP	11.41	□□□□□ -0.58
CTSB-233	ENST00000534636	NDUFA1	O15239	70 aa		11.4	□□□□□ -0.58
CTSB-233	ENST00000534636	MRPS36	P82909	103 aa	Known RBP	11.4	□□□□□ -0.58
CTSB-233	ENST00000534636	IMMP2L	Q96T52	175 aa		11.4	□□□□□ -0.58
CTSB-233	ENST00000534636	MRPL35	Q9NZE8	188 aa	Known RBP	11.4	□□□□□ -0.58
CTSB-233	ENST00000534636	NPY	P01303	97 aa		11.39	□□□□□ -0.59
CTSB-233	ENST00000534636	RAB5A	P20339	215 aa		11.39	□□□□□ -0.59
CTSB-233	ENST00000534636	PSORS1C2	Q9UIG4	136 aa		11.39	□□□□□ -0.59
CTSB-233	ENST00000534636	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.38	□□□□□ -0.59
CTSB-233	ENST00000534636	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.38	□□□□□ -0.59
CTSB-233	ENST00000534636	IFI27	P40305	119 aa	Predicted RBP	11.38	□□□□□ -0.59
CTSB-233	ENST00000534636	KRTAP10-8	P60410	259 aa		11.38	□□□□□ -0.59
CTSB-233	ENST00000534636	SRSF3	P84103	164 aa	Known RBP	11.38	□□□□□ -0.59
CTSB-233	ENST00000534636	C1orf137	Q5JT78	98 aa		11.38	□□□□□ -0.59
CTSB-233	ENST00000534636	ORMDL3	Q8N138	153 aa		11.38	□□□□□ -0.59
CTSB-233	ENST00000534636		A0A1B0GXF2	115 aa		11.37	□□□□□ -0.59
CTSB-233	ENST00000534636	ODF1	Q14990	250 aa		11.37	□□□□□ -0.59
CTSB-233	ENST00000534636	PHF5A	Q7RTV0	110 aa	Known RBP	11.36	□□□□□ -0.59
CTSB-233	ENST00000534636	ATP5L2	Q7Z4Y8	100 aa		11.36	□□□□□ -0.59
CTSB-233	ENST00000534636	PRELID3A	Q96N28	172 aa		11.35	□□□□□ -0.59
CTSB-233	ENST00000534636	TMEM136	Q6ZRR5	245 aa		11.34	□□□□□ -0.59
CTSB-233	ENST00000534636	FAM104A	Q969W3	186 aa		11.34	□□□□□ -0.59
CTSB-233	ENST00000534636	TLX1NB	P0CAT3	122 aa		11.33	□□□□□ -0.6
CTSB-233	ENST00000534636		A0A1B0GVG6	124 aa		11.32	□□□□□ -0.6
CTSB-233	ENST00000534636	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.32	□□□□□ -0.6
CTSB-233	ENST00000534636	TMEM141	Q96I45	108 aa		11.32	□□□□□ -0.6
CTSB-233	ENST00000534636	C2orf88	Q9BSF0	95 aa		11.32	□□□□□ -0.6
CTSB-233	ENST00000534636	PYGO1	Q9Y3Y4	419 aa		11.32	□□□□□ -0.6
CTSB-233	ENST00000534636		A0A087WZ39	114 aa		11.31	□□□□□ -0.6
CTSB-233	ENST00000534636	GAGE2E	Q4V326	116 aa		11.31	□□□□□ -0.6
CTSB-233	ENST00000534636	C10orf25	Q5T742	122 aa		11.31	□□□□□ -0.6
CTSB-233	ENST00000534636	TEX43	Q6ZNM6	134 aa		11.31	□□□□□ -0.6
CTSB-233	ENST00000534636	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.31	□□□□□ -0.6
CTSB-233	ENST00000534636	DIRC1	Q969H9	104 aa		11.31	□□□□□ -0.6
CTSB-233	ENST00000534636	C6orf48	Q9UBA6	75 aa		11.31	□□□□□ -0.6
CTSB-233	ENST00000534636	GAGE2D	Q9UEU5	116 aa		11.31	□□□□□ -0.6
CTSB-233	ENST00000534636	IGLV4-3	A0A075B6K6	122 aa		11.3	□□□□□ -0.6
CTSB-233	ENST00000534636		Q6ZN92	141 aa		11.3	□□□□□ -0.6
CTSB-233	ENST00000534636	MAP1LC3A	Q9H492	121 aa		11.3	□□□□□ -0.6
CTSB-233	ENST00000534636	LAMTOR2	Q9Y2Q5	125 aa		11.3	□□□□□ -0.6
CTSB-233	ENST00000534636	RNF213	Q63HN8	5207 aa		11.3	□□□□□ -0.6
CTSB-233	ENST00000534636	TRBV30	A0A0K0K1B3	111 aa		11.29	□□□□□ -0.6
CTSB-233	ENST00000534636	FAM168B	A1KXE4	195 aa		11.29	□□□□□ -0.6
CTSB-233	ENST00000534636	IGLV7-43	P04211	117 aa		11.29	□□□□□ -0.6
CTSB-233	ENST00000534636	PACRG	Q96M98	296 aa	Predicted RBP	11.29	□□□□□ -0.6
CTSB-233	ENST00000534636	LOC389332	A0A1B0GUA5	103 aa		11.28	□□□□□ -0.6
CTSB-233	ENST00000534636	LINC00242	Q5T6M2	205 aa		11.28	□□□□□ -0.6
CTSB-233	ENST00000534636	UBE2B	P63146	152 aa		11.27	□□□□□ -0.61
CTSB-233	ENST00000534636	PNRC1	Q12796	327 aa	Predicted RBP	11.27	□□□□□ -0.61
CTSB-233	ENST00000534636	CYSLTR1	Q9Y271	337 aa		11.27	□□□□□ -0.61
CTSB-233	ENST00000534636		M0QXV9	152 aa		11.26	□□□□□ -0.61
CTSB-233	ENST00000534636	PRSS47	A8MTI9	375 aa		11.25	□□□□□ -0.61
CTSB-233	ENST00000534636	NDUFC2-KCTD14	E9PQ53	114 aa		11.25	□□□□□ -0.61
CTSB-233	ENST00000534636	PRSS2	P07478	247 aa		11.25	□□□□□ -0.61
CTSB-233	ENST00000534636	UBE2D1	P51668	147 aa		11.25	□□□□□ -0.61
CTSB-233	ENST00000534636	KIAA0087	Q14695	138 aa		11.25	□□□□□ -0.61
CTSB-233	ENST00000534636	LINC01561	Q8N1V8	128 aa		11.25	□□□□□ -0.61
CTSB-233	ENST00000534636		H0Y9J4	135 aa		11.24	□□□□□ -0.61
CTSB-233	ENST00000534636	MT-ND4L	P03901	98 aa		11.24	□□□□□ -0.61
CTSB-233	ENST00000534636	ORMDL2	Q53FV1	153 aa		11.24	□□□□□ -0.61
CTSB-233	ENST00000534636	C2orf82	Q6UX34	121 aa		11.24	□□□□□ -0.61
CTSB-233	ENST00000534636	C2orf66	Q6UXQ4	117 aa		11.24	□□□□□ -0.61
CTSB-233	ENST00000534636		Q8N8P6	123 aa		11.24	□□□□□ -0.61
CTSB-233	ENST00000534636	ANAPC16	Q96DE5	110 aa		11.24	□□□□□ -0.61
CTSB-233	ENST00000534636	VCX2	Q9H322	139 aa		11.24	□□□□□ -0.61
CTSB-233	ENST00000534636		K7EMI3	77 aa		11.22	□□□□□ -0.61
CTSB-233	ENST00000534636	NPS	P0C0P6	89 aa		11.22	□□□□□ -0.61
CTSB-233	ENST00000534636	CKS1B	P61024	79 aa		11.22	□□□□□ -0.61
CTSB-233	ENST00000534636	TOMM7	Q9P0U1	55 aa		11.22	□□□□□ -0.61
CTSB-233	ENST00000534636	PRR26	Q8N8Z3	221 aa		11.21	□□□□□ -0.61
CTSB-233	ENST00000534636	RAB14	P61106	215 aa		11.2	□□□□□ -0.62
CTSB-233	ENST00000534636	PAPPA-AS1	Q5QFB9	102 aa		11.2	□□□□□ -0.62
CTSB-233	ENST00000534636	KRTAP11-1	Q8IUC1	163 aa		11.2	□□□□□ -0.62
CTSB-233	ENST00000534636	AMELX	Q99217	191 aa		11.2	□□□□□ -0.62
CTSB-233	ENST00000534636	IGLV1-50	A0A075B6I6	118 aa		11.19	□□□□□ -0.62
CTSB-233	ENST00000534636	G0S2	P27469	103 aa		11.19	□□□□□ -0.62
CTSB-233	ENST00000534636	SEC11A	P67812	179 aa		11.19	□□□□□ -0.62
CTSB-233	ENST00000534636	C6orf226	Q5I0X4	101 aa		11.19	□□□□□ -0.62
CTSB-233	ENST00000534636	LINC00173	Q6ZV60	143 aa		11.19	□□□□□ -0.62
CTSB-233	ENST00000534636	NXT2	Q9NPJ8	142 aa	Known RBP	11.19	□□□□□ -0.62
CTSB-233	ENST00000534636	C9orf129	Q5T035	196 aa	Known RBP	11.18	□□□□□ -0.62
CTSB-233	ENST00000534636	ZC2HC1B	Q5TFG8	222 aa		11.18	□□□□□ -0.62
CTSB-233	ENST00000534636	CTDSP1	Q9GZU7	261 aa		11.18	□□□□□ -0.62
CTSB-233	ENST00000534636	HERVK_113	P63121	156 aa		11.17	□□□□□ -0.62
CTSB-233	ENST00000534636	KRTAP7-1	Q8IUC3	87 aa		11.17	□□□□□ -0.62
CTSB-233	ENST00000534636		Q8IZM0	81 aa		11.17	□□□□□ -0.62
CTSB-233	ENST00000534636	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.17	□□□□□ -0.62
CTSB-233	ENST00000534636	GEMIN7	Q9H840	131 aa	Known RBP	11.16	□□□□□ -0.62
CTSB-233	ENST00000534636	IGIP	A6NJ69	53 aa		11.15	□□□□□ -0.62
CTSB-233	ENST00000534636	RPL13A	P40429	203 aa	Known RBP	11.15	□□□□□ -0.62
CTSB-233	ENST00000534636	FAM19A3	Q7Z5A8	133 aa		11.15	□□□□□ -0.62

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