RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 Q6ZN92 141 aa9.06□□□□□ -0.96
VPS11-205ENST00000534551 SCGB3A1Q96QR1 104 aa9.06□□□□□ -0.96
VPS11-205ENST00000534551 TIMM17AQ99595 171 aa9.06□□□□□ -0.96
VPS11-205ENST00000534551 IGHV3OR16-9A0A0B4J2B5 98 aa9.05□□□□□ -0.96
VPS11-205ENST00000534551 IGHV1-58A0A0C4DH39 117 aa9.05□□□□□ -0.96
VPS11-205ENST00000534551 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
VPS11-205ENST00000534551 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
VPS11-205ENST00000534551 LINC00614P0C842 121 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 MALP21145 153 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 CFAP161Q6P656 301 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 Q6ZSA8 131 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 VCX2Q9H322 139 aa9.04□□□□□ -0.96
VPS11-205ENST00000534551 PANO1I0J062 215 aa9.03□□□□□ -0.96
VPS11-205ENST00000534551 LINC00310P59036 64 aa9.03□□□□□ -0.96
VPS11-205ENST00000534551 ERASQ7Z444 233 aa9.03□□□□□ -0.96
VPS11-205ENST00000534551 C9orf163Q8N9P6 203 aa9.03□□□□□ -0.96
VPS11-205ENST00000534551 HBDP02042 147 aa9.02□□□□□ -0.97
VPS11-205ENST00000534551 CHTF8P0CG12 524 aa9.02□□□□□ -0.97
VPS11-205ENST00000534551 ORAOV1Q8WV07 137 aa9.02□□□□□ -0.97
VPS11-205ENST00000534551 KRTAP4-5Q9BYR2 181 aa9.02□□□□□ -0.97
VPS11-205ENST00000534551 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.02□□□□□ -0.97
VPS11-205ENST00000534551 IGLV4-69A0A075B6H9 119 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 NPSP0C0P6 89 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 G0S2P27469 103 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 SPAG11BQ08648 103 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 SCXQ7RTU7 201 aa9.01□□□□□ -0.97
VPS11-205ENST00000534551 A0A0J9YXV3 536 aa9□□□□□ -0.97
VPS11-205ENST00000534551 PDZD11Q5EBL8 140 aa9□□□□□ -0.97
VPS11-205ENST00000534551 CARD19Q96LW7 228 aa9□□□□□ -0.97
VPS11-205ENST00000534551 IGHV3-64A0A075B6Q5 118 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
VPS11-205ENST00000534551 RAB5BP61020 215 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 Q6ZRU5 148 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
VPS11-205ENST00000534551 ABCA13Q86UQ4 5058 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 A0A087WZ39 114 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
VPS11-205ENST00000534551 SERF1AO75920 110 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 PAPPA-AS1Q5QFB9 102 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 FAM19A2Q8N3H0 131 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 CHCHD1Q96BP2 118 aaKnown RBP8.98□□□□□ -0.97
VPS11-205ENST00000534551 CST9LQ9H4G1 147 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
VPS11-205ENST00000534551 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.97□□□□□ -0.97
VPS11-205ENST00000534551 NUPR1O60356 82 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 APOMO95445 188 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 NDUFA6P56556 154 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 SYCNQ0VAF6 134 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 PMVKQ15126 192 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
VPS11-205ENST00000534551 HSBP1O75506 76 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 C10orf25Q5T742 122 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 OR10D4PQ8NGN7 298 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 CIRBP-AS1Q8TBR5 109 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
VPS11-205ENST00000534551 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.98
VPS11-205ENST00000534551 A0A096LNI7 61 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 HERVK_113P63121 156 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 KIAA0087Q14695 138 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 LINC00469Q8N7U9 141 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 CHAC1Q9BUX1 264 aa8.95□□□□□ -0.98
VPS11-205ENST00000534551 C2orf82Q6UX34 121 aa8.94□□□□□ -0.98
VPS11-205ENST00000534551 Q8N1X5 172 aa8.94□□□□□ -0.98
VPS11-205ENST00000534551 VPS13BQ7Z7G8 4022 aa8.94□□□□□ -0.98
VPS11-205ENST00000534551 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BKO60814 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 ATP5LO75964 103 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BJP06899 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 SPINK8P0C7L1 97 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BOP23527 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BBP33778 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BDP58876 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BCP62807 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST2H2BEQ16778 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.93□□□□□ -0.98
VPS11-205ENST00000534551 Q5VSD8 79 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BHQ93079 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 C2orf48Q96LS8 159 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BNQ99877 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 HIST1H2BMQ99879 126 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 TOMM7Q9P0U1 55 aa8.93□□□□□ -0.98
VPS11-205ENST00000534551 IGLV5-45A0A087WSX0 123 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 IGLC3P0DOY3 106 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 UNQ6190/PRO20217Q6UXQ8 127 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 IFI27L1Q96BM0 104 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 PACRGQ96M98 296 aaPredicted RBP8.92□□□□□ -0.98
VPS11-205ENST00000534551 C6orf48Q9UBA6 75 aa8.92□□□□□ -0.98
VPS11-205ENST00000534551 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
VPS11-205ENST00000534551 NDUFA1O15239 70 aa8.91□□□□□ -0.98
VPS11-205ENST00000534551 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
VPS11-205ENST00000534551 SEC11AP67812 179 aa8.91□□□□□ -0.98
VPS11-205ENST00000534551 CIRBPQ14011 172 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 527.3 ms