RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 LRRC9Q6ZRR7 1453 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 TRAV1-2A0A0B4J238 106 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 K7EP34 96 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 APOC3P02656 99 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 ACYP2P14621 99 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 ZNF137PP52743 207 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 HMGN3Q15651 99 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 PMCHL1Q16048 86 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 C20orf78Q9BR46 151 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 LINC00472Q9H8W2 130 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 PROK2Q9HC23 129 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 NXT2Q9NPJ8 142 aaKnown RBP0.49□□□□□ -2.33
RDX-215ENST00000533961 LINC00846Q9NV44 126 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 WNK3Q9BYP7 1800 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 ZNF236Q9UL36 1845 aa0.49□□□□□ -2.33
RDX-215ENST00000533961 CUX1P39880 1505 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 MAP3K1Q13233 1512 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 MYH4Q9Y623 1939 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 RRBP1Q9P2E9 1410 aaKnown RBP0.48□□□□□ -2.33
RDX-215ENST00000533961 PLXNB2O15031 1838 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 SUPT6HQ7KZ85 1726 aaKnown RBP0.48□□□□□ -2.33
RDX-215ENST00000533961 UQCRHLA0A096LP55 91 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 C10orf142B7Z368 130 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 F2Z2F3 143 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 G3V318 75 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 PIN1P1O15428 100 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 LY6G6CO95867 125 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 UQCRHP07919 91 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 MGPP08493 103 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 TRAPPC2P0DI81 140 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 TRAPPC2BP0DI82 140 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 Q6ZRX8 168 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 FAM223AQ8IWN6 122 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 ARL2-SNX15V9GYD0 113 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 CACNA1AO00555 2505 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 ALKQ9UM73 1620 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 KCPQ6ZWJ8 1503 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 DCAF1Q9Y4B6 1507 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 ASH1LQ9NR48 2969 aaKnown RBP0.48□□□□□ -2.33
RDX-215ENST00000533961 ERVK-7P63135 1459 aa0.48□□□□□ -2.33
RDX-215ENST00000533961 TARBP1Q13395 1621 aaKnown RBP0.47□□□□□ -2.33
RDX-215ENST00000533961 PTPN23Q9H3S7 1636 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 A0A0G2JND7 137 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 CTXND1A0A1B0GTU2 59 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 FAM223BA6NKX1 122 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 CYB5AP00167 134 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 NMBP08949 121 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 FAUP35544 74 aaKnown RBP0.47□□□□□ -2.33
RDX-215ENST00000533961 SPINT3P49223 89 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 SPINK9Q5DT21 86 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 CFAP126Q5VTH2 177 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 ALKAL2Q6UX46 152 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 TMEM263Q8WUH6 116 aaKnown RBP0.47□□□□□ -2.33
RDX-215ENST00000533961 PRO1933Q9H354 126 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 CFAP74Q9C0B2 1584 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 DIP2BQ9P265 1576 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.47□□□□□ -2.33
RDX-215ENST00000533961 KDM5DQ9BY66 1539 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 MYO7BQ6PIF6 2116 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 FSIP2Q5CZC0 6907 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 CRYBG1Q9Y4K1 1723 aa0.47□□□□□ -2.33
RDX-215ENST00000533961 SYNE2Q8WXH0 6885 aaKnown RBP0.47□□□□□ -2.33
RDX-215ENST00000533961 EDC4Q6P2E9 1401 aaKnown RBP0.47□□□□□ -2.33
RDX-215ENST00000533961 TMEM131LA2VDJ0 1609 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 KIF20BQ96Q89 1820 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 SMIM11AP58511 58 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 SNRPFP62306 86 aaKnown RBP0.46□□□□□ -2.34
RDX-215ENST00000533961 PEA15Q15121 130 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 PSMG4Q5JS54 123 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 ZNF720Q7Z2F6 126 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 S100A16Q96FQ6 103 aaKnown RBP0.46□□□□□ -2.34
RDX-215ENST00000533961 PRR15LQ9BU68 103 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 C10orf95Q9H7T3 257 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 PLAC8Q9NZF1 115 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 HIGD1BQ9P298 99 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 ABCA1O95477 2261 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 A0A0G2JMZ2 1700 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 XRN1Q8IZH2 1706 aaKnown RBP0.46□□□□□ -2.34
RDX-215ENST00000533961 ANKRD17O75179 2603 aaKnown RBP0.46□□□□□ -2.34
RDX-215ENST00000533961 MUC2Q02817 5179 aa0.46□□□□□ -2.34
RDX-215ENST00000533961 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 F5P12259 2224 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 NEBP20929 6669 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 A0A1B0GWA3 101 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 ZNF815PA8K554 130 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 HMGN2P05204 90 aaKnown RBP0.45□□□□□ -2.34
RDX-215ENST00000533961 ACYP1P07311 99 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 ARMS2P0C7Q2 107 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 GCHFRP30047 84 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 TDRG1Q3Y452 100 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 ETDBQ3ZM63 59 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 S100A13Q99584 98 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 NCOA2Q15596 1464 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 C1orf167Q5SNV9 1468 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 C5P01031 1676 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 LRP6O75581 1613 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 LAMC1P11047 1609 aa0.45□□□□□ -2.34
RDX-215ENST00000533961 NHSL1Q5SYE7 1610 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms