RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CRPP02741 224 aa7.97□□□□□ -1.13
CAPN1-223ENST00000533079 PKIAP61925 76 aa7.97□□□□□ -1.13
CAPN1-223ENST00000533079 ZNF56Q15929 161 aa7.97□□□□□ -1.13
CAPN1-223ENST00000533079 FAM74A4Q5TZK3 123 aa7.97□□□□□ -1.13
CAPN1-223ENST00000533079 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
CAPN1-223ENST00000533079 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
CAPN1-223ENST00000533079 SDHAF1A6NFY7 115 aa7.96□□□□□ -1.14
CAPN1-223ENST00000533079 USP17L23D6RBM5 183 aa7.96□□□□□ -1.14
CAPN1-223ENST00000533079 CIRBPQ14011 172 aaKnown RBP7.96□□□□□ -1.14
CAPN1-223ENST00000533079 LINC00173Q6ZV60 143 aa7.96□□□□□ -1.14
CAPN1-223ENST00000533079 TOMM6Q96B49 74 aa7.96□□□□□ -1.14
CAPN1-223ENST00000533079 IFI27L1Q96BM0 104 aa7.96□□□□□ -1.14
CAPN1-223ENST00000533079 KIR2DL4Q99706 377 aa7.96□□□□□ -1.14
CAPN1-223ENST00000533079 TRBV10-1A0A0K0K1A3 114 aa7.95□□□□□ -1.14
CAPN1-223ENST00000533079 I3L3M4 83 aa7.95□□□□□ -1.14
CAPN1-223ENST00000533079 ZNF664Q8N3J9 261 aa7.95□□□□□ -1.14
CAPN1-223ENST00000533079 TSTD3H0UI37 97 aa7.94□□□□□ -1.14
CAPN1-223ENST00000533079 MIAQ16674 131 aa7.94□□□□□ -1.14
CAPN1-223ENST00000533079 PRSS1P07477 247 aa7.93□□□□□ -1.14
CAPN1-223ENST00000533079 ENHOQ6UWT2 76 aa7.93□□□□□ -1.14
CAPN1-223ENST00000533079 SDIM1Q6ZPB5 146 aa7.93□□□□□ -1.14
CAPN1-223ENST00000533079 LINC01600Q96MT4 127 aa7.93□□□□□ -1.14
CAPN1-223ENST00000533079 VAMP8Q9BV40 100 aa7.93□□□□□ -1.14
CAPN1-223ENST00000533079 Q9UF83 564 aa7.93□□□□□ -1.14
CAPN1-223ENST00000533079 TRAV12-1A0A0B4J245 112 aa7.92□□□□□ -1.14
CAPN1-223ENST00000533079 PANO1I0J062 215 aa7.92□□□□□ -1.14
CAPN1-223ENST00000533079 NPSP0C0P6 89 aa7.92□□□□□ -1.14
CAPN1-223ENST00000533079 ERASQ7Z444 233 aa7.92□□□□□ -1.14
CAPN1-223ENST00000533079 TMEM141Q96I45 108 aa7.92□□□□□ -1.14
CAPN1-223ENST00000533079 CYSLTR1Q9Y271 337 aa7.92□□□□□ -1.14
CAPN1-223ENST00000533079 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
CAPN1-223ENST00000533079 CNBPP62633 177 aaKnown RBP7.91□□□□□ -1.14
CAPN1-223ENST00000533079 RPL36AP83881 106 aaKnown RBP7.91□□□□□ -1.14
CAPN1-223ENST00000533079 C2orf66Q6UXQ4 117 aa7.91□□□□□ -1.14
CAPN1-223ENST00000533079 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
CAPN1-223ENST00000533079 RPL36ALQ969Q0 106 aaKnown RBP7.91□□□□□ -1.14
CAPN1-223ENST00000533079 TRBV7-3A0A075B6L6 115 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 TRBV6-8A0A0A6YYG3 113 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 IGIPA6NJ69 53 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 TMEM262E9PQX1 116 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 TSHBP01222 138 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 ANGP03950 147 aaKnown RBP7.9□□□□□ -1.14
CAPN1-223ENST00000533079 UBE2D3P61077 147 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 UBE2D2P62837 147 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 SCGB3A1Q96QR1 104 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 TIMM17AQ99595 171 aa7.9□□□□□ -1.14
CAPN1-223ENST00000533079 ODF1Q14990 250 aa7.89□□□□□ -1.15
CAPN1-223ENST00000533079 MPV17L2Q567V2 206 aa7.89□□□□□ -1.15
CAPN1-223ENST00000533079 C20orf203Q8NBC4 194 aa7.89□□□□□ -1.15
CAPN1-223ENST00000533079 PYGO1Q9Y3Y4 419 aa7.89□□□□□ -1.15
CAPN1-223ENST00000533079 IGHV3-64A0A075B6Q5 118 aa7.88□□□□□ -1.15
CAPN1-223ENST00000533079 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
CAPN1-223ENST00000533079 PCP4L1A6NKN8 68 aa7.88□□□□□ -1.15
CAPN1-223ENST00000533079 HSBP1L1C9JCN9 74 aa7.88□□□□□ -1.15
CAPN1-223ENST00000533079 Q6ZN92 141 aa7.88□□□□□ -1.15
CAPN1-223ENST00000533079 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
CAPN1-223ENST00000533079 MIEN1Q9BRT3 115 aa7.88□□□□□ -1.15
CAPN1-223ENST00000533079 PRR34Q9NV39 138 aa7.88□□□□□ -1.15
CAPN1-223ENST00000533079 A0A087WYN8 130 aa7.87□□□□□ -1.15
CAPN1-223ENST00000533079 A0A0J9YXV3 536 aa7.87□□□□□ -1.15
CAPN1-223ENST00000533079 DDTP30046 118 aa7.87□□□□□ -1.15
CAPN1-223ENST00000533079 SPATA45Q537H7 98 aa7.87□□□□□ -1.15
CAPN1-223ENST00000533079 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
CAPN1-223ENST00000533079 PAM16Q9Y3D7 125 aa7.87□□□□□ -1.15
CAPN1-223ENST00000533079 IGLC3P0DOY3 106 aa7.86□□□□□ -1.15
CAPN1-223ENST00000533079 TMEM97Q5BJF2 176 aa7.86□□□□□ -1.15
CAPN1-223ENST00000533079 PAPPA-AS1Q5QFB9 102 aa7.86□□□□□ -1.15
CAPN1-223ENST00000533079 PRO1933Q9H354 126 aa7.86□□□□□ -1.15
CAPN1-223ENST00000533079 DPM2O94777 84 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 PLNP26678 52 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 COTL1Q14019 142 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 DPH3Q96FX2 82 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 CHCHD5Q9BSY4 110 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 TIMM21Q9BVV7 248 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 UQCR10Q9UDW1 63 aa7.85□□□□□ -1.15
CAPN1-223ENST00000533079 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
CAPN1-223ENST00000533079 F8VRH5 84 aa7.84□□□□□ -1.15
CAPN1-223ENST00000533079 IGKCP01834 107 aa7.84□□□□□ -1.15
CAPN1-223ENST00000533079 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
CAPN1-223ENST00000533079 SMAGPQ0VAQ4 97 aa7.84□□□□□ -1.15
CAPN1-223ENST00000533079 PMVKQ15126 192 aa7.84□□□□□ -1.15
CAPN1-223ENST00000533079 MRPL52Q86TS9 123 aaKnown RBP7.84□□□□□ -1.15
CAPN1-223ENST00000533079 ATOH7Q8N100 152 aa7.84□□□□□ -1.15
CAPN1-223ENST00000533079 SPANXA1Q9NS26 97 aa7.84□□□□□ -1.15
CAPN1-223ENST00000533079 LINC00587B1AMM8 73 aa7.83□□□□□ -1.16
CAPN1-223ENST00000533079 H0Y8G0 127 aa7.83□□□□□ -1.16
CAPN1-223ENST00000533079 H7C423 109 aa7.83□□□□□ -1.16
CAPN1-223ENST00000533079 MAJINQ3KP22 176 aa7.83□□□□□ -1.16
CAPN1-223ENST00000533079 PMCHL2Q9BQD1 86 aa7.83□□□□□ -1.16
CAPN1-223ENST00000533079 CST9LQ9H4G1 147 aa7.83□□□□□ -1.16
CAPN1-223ENST00000533079 CHTOPQ9Y3Y2 248 aaKnown RBP7.83□□□□□ -1.16
CAPN1-223ENST00000533079 CSDC2Q9Y534 153 aaKnown RBP7.83□□□□□ -1.16
CAPN1-223ENST00000533079 DLEU1O43261 78 aa7.82□□□□□ -1.16
CAPN1-223ENST00000533079 CHTF8P0CG12 524 aa7.82□□□□□ -1.16
CAPN1-223ENST00000533079 KRTAP10-8P60410 259 aa7.82□□□□□ -1.16
CAPN1-223ENST00000533079 RPL39P62891 51 aaKnown RBP7.82□□□□□ -1.16
CAPN1-223ENST00000533079 MRPS36P82909 103 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms