RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 UBE2D1P51668 147 aa16.13■□□□□ 0.17
USP48-214ENST00000532737 PMCHL1Q16048 86 aa16.13■□□□□ 0.17
USP48-214ENST00000532737 LINC00242Q5T6M2 205 aa16.13■□□□□ 0.17
USP48-214ENST00000532737 C2orf88Q9BSF0 95 aa16.13■□□□□ 0.17
USP48-214ENST00000532737 IGHV1-58A0A0C4DH39 117 aa16.12■□□□□ 0.17
USP48-214ENST00000532737 ATP6V1G1O75348 118 aa16.12■□□□□ 0.17
USP48-214ENST00000532737 PAPPA-AS1Q5QFB9 102 aa16.12■□□□□ 0.17
USP48-214ENST00000532737 GVQW2A0A096LPI5 108 aaPredicted RBP16.11■□□□□ 0.17
USP48-214ENST00000532737 IGHV3OR16-9A0A0B4J2B5 98 aa16.11■□□□□ 0.17
USP48-214ENST00000532737 HBDP02042 147 aa16.11■□□□□ 0.17
USP48-214ENST00000532737 SLPIP03973 132 aa16.11■□□□□ 0.17
USP48-214ENST00000532737 S100A1P23297 94 aa16.11■□□□□ 0.17
USP48-214ENST00000532737 MALP21145 153 aa16.1■□□□□ 0.17
USP48-214ENST00000532737 COX6A2Q02221 97 aa16.1■□□□□ 0.17
USP48-214ENST00000532737 BAGE3Q86Y29 109 aa16.1■□□□□ 0.17
USP48-214ENST00000532737 CHCHD1Q96BP2 118 aaKnown RBP16.1■□□□□ 0.17
USP48-214ENST00000532737 APOBP04114 4563 aaKnown RBP16.08■□□□□ 0.17
USP48-214ENST00000532737 CDK2AP2O75956 126 aa16.08■□□□□ 0.16
USP48-214ENST00000532737 CNBPP62633 177 aaKnown RBP16.08■□□□□ 0.16
USP48-214ENST00000532737 PDZD11Q5EBL8 140 aa16.08■□□□□ 0.16
USP48-214ENST00000532737 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.06■□□□□ 0.16
USP48-214ENST00000532737 C9orf163Q8N9P6 203 aa16.06■□□□□ 0.16
USP48-214ENST00000532737 LINC00526Q96FQ7 95 aa16.06■□□□□ 0.16
USP48-214ENST00000532737 FAM19A3Q7Z5A8 133 aa16.05■□□□□ 0.16
USP48-214ENST00000532737 CST9LQ9H4G1 147 aa16.05■□□□□ 0.16
USP48-214ENST00000532737 LINC00310P59036 64 aa16.04■□□□□ 0.16
USP48-214ENST00000532737 FAM30AQ9NZY2 134 aa16.04■□□□□ 0.16
USP48-214ENST00000532737 A0A087WZ39 114 aa16.03■□□□□ 0.16
USP48-214ENST00000532737 A0A0J9YXV3 536 aa16.03■□□□□ 0.16
USP48-214ENST00000532737 PMVKQ15126 192 aa16.03■□□□□ 0.16
USP48-214ENST00000532737 DNAH8Q96JB1 4490 aa16.02■□□□□ 0.16
USP48-214ENST00000532737 HSBP1O75506 76 aa16.02■□□□□ 0.16
USP48-214ENST00000532737 SERF1AO75920 110 aa16.02■□□□□ 0.16
USP48-214ENST00000532737 APOMO95445 188 aa16.02■□□□□ 0.16
USP48-214ENST00000532737 IGHV3-64A0A075B6Q5 118 aa16.01■□□□□ 0.15
USP48-214ENST00000532737 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.01■□□□□ 0.15
USP48-214ENST00000532737 ZNF561-AS1K7EIQ3 104 aa16.01■□□□□ 0.15
USP48-214ENST00000532737 XGP55808 180 aa16.01■□□□□ 0.15
USP48-214ENST00000532737 FAM19A2Q8N3H0 131 aa16.01■□□□□ 0.15
USP48-214ENST00000532737 IGLV4-69A0A075B6H9 119 aa16■□□□□ 0.15
USP48-214ENST00000532737 ATP5LO75964 103 aa16■□□□□ 0.15
USP48-214ENST00000532737 NUPR1O60356 82 aa15.99■□□□□ 0.15
USP48-214ENST00000532737 SEC11AP67812 179 aa15.99■□□□□ 0.15
USP48-214ENST00000532737 ORAOV1Q8WV07 137 aa15.99■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BKO60814 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BJP06899 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BOP23527 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BBP33778 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 NDUFA6P56556 154 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BDP58876 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BCP62807 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HERVK_113P63121 156 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 SPAG11BQ08648 103 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST2H2BEQ16778 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.98■□□□□ 0.15
USP48-214ENST00000532737 SDIM1Q6ZPB5 146 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 Q6ZSA8 131 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BHQ93079 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BNQ99877 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 HIST1H2BMQ99879 126 aa15.98■□□□□ 0.15
USP48-214ENST00000532737 GEMIN7Q9H840 131 aaKnown RBP15.98■□□□□ 0.15
USP48-214ENST00000532737 HAMPP81172 84 aa15.97■□□□□ 0.15
USP48-214ENST00000532737 LINC01561Q8N1V8 128 aa15.97■□□□□ 0.15
USP48-214ENST00000532737 OR10D4PQ8NGN7 298 aa15.97■□□□□ 0.15
USP48-214ENST00000532737 CDKN2A-AS1Q9UH64 79 aa15.97■□□□□ 0.15
USP48-214ENST00000532737 TINCRA0A1B0GVN0 87 aa15.96■□□□□ 0.15
USP48-214ENST00000532737 SYCNQ0VAF6 134 aa15.95■□□□□ 0.14
USP48-214ENST00000532737 C2orf48Q96LS8 159 aa15.95■□□□□ 0.14
USP48-214ENST00000532737 CARD19Q96LW7 228 aa15.94■□□□□ 0.14
USP48-214ENST00000532737 Q6ZRU5 148 aa15.93■□□□□ 0.14
USP48-214ENST00000532737 LINC00469Q8N7U9 141 aa15.93■□□□□ 0.14
USP48-214ENST00000532737 IFI27L1Q96BM0 104 aa15.93■□□□□ 0.14
USP48-214ENST00000532737 IGLV5-45A0A087WSX0 123 aa15.92■□□□□ 0.14
USP48-214ENST00000532737 KIAA0087Q14695 138 aa15.92■□□□□ 0.14
USP48-214ENST00000532737 Q8N1X5 172 aa15.92■□□□□ 0.14
USP48-214ENST00000532737 CAMK2N2Q96S95 79 aa15.92■□□□□ 0.14
USP48-214ENST00000532737 IGLC3P0DOY3 106 aa15.9■□□□□ 0.14
USP48-214ENST00000532737 PANO1I0J062 215 aa15.89■□□□□ 0.13
USP48-214ENST00000532737 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.89■□□□□ 0.13
USP48-214ENST00000532737 LEPROTL1O95214 131 aa15.88■□□□□ 0.13
USP48-214ENST00000532737 PACRGQ96M98 296 aaPredicted RBP15.88■□□□□ 0.13
USP48-214ENST00000532737 CHAC1Q9BUX1 264 aa15.88■□□□□ 0.13
USP48-214ENST00000532737 F8WDY8 70 aa15.87■□□□□ 0.13
USP48-214ENST00000532737 TRAV12-1A0A0B4J245 112 aa15.86■□□□□ 0.13
USP48-214ENST00000532737 SMIM1B2RUZ4 78 aa15.86■□□□□ 0.13
USP48-214ENST00000532737 CHTF8P0CG12 524 aa15.86■□□□□ 0.13
USP48-214ENST00000532737 C10orf25Q5T742 122 aa15.86■□□□□ 0.13
USP48-214ENST00000532737 UNQ6190/PRO20217Q6UXQ8 127 aa15.86■□□□□ 0.13
USP48-214ENST00000532737 SCXQ7RTU7 201 aa15.86■□□□□ 0.13
USP48-214ENST00000532737 CHTOPQ9Y3Y2 248 aaKnown RBP15.86■□□□□ 0.13
USP48-214ENST00000532737 FABP4P15090 132 aa15.85■□□□□ 0.13
USP48-214ENST00000532737 TOMM7Q9P0U1 55 aa15.85■□□□□ 0.13
USP48-214ENST00000532737 C11orf86A6NJI1 115 aa15.84■□□□□ 0.13
USP48-214ENST00000532737 NDUFA1O15239 70 aa15.84■□□□□ 0.13
USP48-214ENST00000532737 ZNF22P17026 224 aaPredicted RBP15.84■□□□□ 0.13
USP48-214ENST00000532737 C2orf82Q6UX34 121 aa15.84■□□□□ 0.13
USP48-214ENST00000532737 CIRBP-AS1Q8TBR5 109 aa15.84■□□□□ 0.13
USP48-214ENST00000532737 MRPL35Q9NZE8 188 aaKnown RBP15.84■□□□□ 0.13
USP48-214ENST00000532737 PRSS2P07478 247 aa15.83■□□□□ 0.12
USP48-214ENST00000532737 SPINK8P0C7L1 97 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms