RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 RPL13AP40429 203 aaKnown RBP12.49□□□□□ -0.41
CHKA-206ENST00000531341 UBE2BP63146 152 aa12.49□□□□□ -0.41
CHKA-206ENST00000531341 TMEM241Q24JQ0 296 aa12.49□□□□□ -0.41
CHKA-206ENST00000531341 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
CHKA-206ENST00000531341 F8WDY8 70 aa12.48□□□□□ -0.41
CHKA-206ENST00000531341 TMEM250H0YL14 139 aa12.48□□□□□ -0.41
CHKA-206ENST00000531341 CEBPGP53567 150 aa12.48□□□□□ -0.41
CHKA-206ENST00000531341 SMAGPQ0VAQ4 97 aa12.48□□□□□ -0.41
CHKA-206ENST00000531341 KIAA0087Q14695 138 aa12.46□□□□□ -0.41
CHKA-206ENST00000531341 C9orf129Q5T035 196 aaKnown RBP12.46□□□□□ -0.41
CHKA-206ENST00000531341 CARHSP1Q9Y2V2 147 aaKnown RBP12.46□□□□□ -0.41
CHKA-206ENST00000531341 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
CHKA-206ENST00000531341 LINC01551Q86U37 167 aa12.45□□□□□ -0.42
CHKA-206ENST00000531341 SLC51BQ86UW2 128 aa12.44□□□□□ -0.42
CHKA-206ENST00000531341 TMEM18Q96B42 140 aa12.44□□□□□ -0.42
CHKA-206ENST00000531341 PPP1R17O96001 155 aa12.43□□□□□ -0.42
CHKA-206ENST00000531341 C2orf82Q6UX34 121 aa12.43□□□□□ -0.42
CHKA-206ENST00000531341 PPP1R2P9O14990 202 aa12.42□□□□□ -0.42
CHKA-206ENST00000531341 ZNF861PO60384 105 aa12.42□□□□□ -0.42
CHKA-206ENST00000531341 RIGQ13278 110 aa12.42□□□□□ -0.42
CHKA-206ENST00000531341 OSTCQ9NRP0 149 aa12.42□□□□□ -0.42
CHKA-206ENST00000531341 FAM104BQ5XKR9 115 aa12.41□□□□□ -0.42
CHKA-206ENST00000531341 V9GYV3 84 aa12.41□□□□□ -0.42
CHKA-206ENST00000531341 A0A087X002 238 aa12.4□□□□□ -0.42
CHKA-206ENST00000531341 IFITM10A6NMD0 228 aa12.4□□□□□ -0.42
CHKA-206ENST00000531341 SMIM7Q9BQ49 75 aa12.4□□□□□ -0.42
CHKA-206ENST00000531341 NDUFC2-KCTD14E9PQ53 114 aa12.39□□□□□ -0.43
CHKA-206ENST00000531341 MRPS36P82909 103 aaKnown RBP12.39□□□□□ -0.43
CHKA-206ENST00000531341 C20orf78Q9BR46 151 aa12.39□□□□□ -0.43
CHKA-206ENST00000531341 TRBV24-1A0A075B6N3 115 aa12.38□□□□□ -0.43
CHKA-206ENST00000531341 HBBP68871 147 aa12.38□□□□□ -0.43
CHKA-206ENST00000531341 SPANXA1Q9NS26 97 aa12.38□□□□□ -0.43
CHKA-206ENST00000531341 TCAPO15273 167 aa12.37□□□□□ -0.43
CHKA-206ENST00000531341 TRBV30A0A0K0K1B3 111 aa12.36□□□□□ -0.43
CHKA-206ENST00000531341 TNFRSF6BO95407 300 aa12.36□□□□□ -0.43
CHKA-206ENST00000531341 RPL32P62910 135 aaKnown RBP12.36□□□□□ -0.43
CHKA-206ENST00000531341 LINC00242Q5T6M2 205 aa12.36□□□□□ -0.43
CHKA-206ENST00000531341 CKS2P33552 79 aa12.35□□□□□ -0.43
CHKA-206ENST00000531341 ALKAL2Q6UX46 152 aa12.35□□□□□ -0.43
CHKA-206ENST00000531341 SMIM2Q9BVW6 85 aa12.35□□□□□ -0.43
CHKA-206ENST00000531341 C22orf24Q9Y442 160 aa12.35□□□□□ -0.43
CHKA-206ENST00000531341 TGIF2-C20orf24A0A0A6YYL0 155 aa12.34□□□□□ -0.43
CHKA-206ENST00000531341 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
CHKA-206ENST00000531341 ZNF727A8MUV8 499 aa12.34□□□□□ -0.43
CHKA-206ENST00000531341 LINC00469Q8N7U9 141 aa12.34□□□□□ -0.43
CHKA-206ENST00000531341 CTDSP1Q9GZU7 261 aa12.34□□□□□ -0.43
CHKA-206ENST00000531341 NAT8BQ9UHF3 227 aa12.33□□□□□ -0.44
CHKA-206ENST00000531341 BLOC1S1P78537 153 aa12.32□□□□□ -0.44
CHKA-206ENST00000531341 TCTE3Q8IZS6 198 aa12.32□□□□□ -0.44
CHKA-206ENST00000531341 PACRGQ96M98 296 aaPredicted RBP12.32□□□□□ -0.44
CHKA-206ENST00000531341 RETNLBQ9BQ08 111 aa12.32□□□□□ -0.44
CHKA-206ENST00000531341 EIF5A2Q9GZV4 153 aaKnown RBP12.32□□□□□ -0.44
CHKA-206ENST00000531341 ANAPC11Q9NYG5 84 aa12.32□□□□□ -0.44
CHKA-206ENST00000531341 D6R8Y8 96 aa12.31□□□□□ -0.44
CHKA-206ENST00000531341 NUPR1O60356 82 aa12.31□□□□□ -0.44
CHKA-206ENST00000531341 NPYP01303 97 aa12.31□□□□□ -0.44
CHKA-206ENST00000531341 SRP19P09132 144 aaKnown RBP12.31□□□□□ -0.44
CHKA-206ENST00000531341 FAM74A3Q4VXF1 159 aa12.31□□□□□ -0.44
CHKA-206ENST00000531341 TYMSOSQ8TAI1 123 aa12.31□□□□□ -0.44
CHKA-206ENST00000531341 IGLV4-3A0A075B6K6 122 aa12.3□□□□□ -0.44
CHKA-206ENST00000531341 XAGE1AQ9HD64 81 aa12.3□□□□□ -0.44
CHKA-206ENST00000531341 ZC2HC1BQ5TFG8 222 aa12.29□□□□□ -0.44
CHKA-206ENST00000531341 SMIM27A0A1W2PRY6 76 aa12.28□□□□□ -0.44
CHKA-206ENST00000531341 CRYGAP11844 174 aa12.27□□□□□ -0.45
CHKA-206ENST00000531341 RPL23P62829 140 aaKnown RBP12.27□□□□□ -0.45
CHKA-206ENST00000531341 KRTAP13-2Q52LG2 175 aa12.27□□□□□ -0.45
CHKA-206ENST00000531341 IFI27P40305 119 aaPredicted RBP12.26□□□□□ -0.45
CHKA-206ENST00000531341 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
CHKA-206ENST00000531341 BCE1O60756 84 aa12.24□□□□□ -0.45
CHKA-206ENST00000531341 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
CHKA-206ENST00000531341 MRPL54Q6P161 138 aaKnown RBP12.24□□□□□ -0.45
CHKA-206ENST00000531341 LINC01561Q8N1V8 128 aa12.24□□□□□ -0.45
CHKA-206ENST00000531341 TOMM7Q9P0U1 55 aa12.24□□□□□ -0.45
CHKA-206ENST00000531341 RPL28P46779 137 aaKnown RBP12.23□□□□□ -0.45
CHKA-206ENST00000531341 TMEM141Q96I45 108 aa12.23□□□□□ -0.45
CHKA-206ENST00000531341 LINC00173Q6ZV60 143 aa12.22□□□□□ -0.45
CHKA-206ENST00000531341 MRPL55Q7Z7F7 128 aaKnown RBP12.22□□□□□ -0.45
CHKA-206ENST00000531341 A0A1B0GW15 77 aa12.21□□□□□ -0.45
CHKA-206ENST00000531341 CKS1BP61024 79 aa12.21□□□□□ -0.45
CHKA-206ENST00000531341 ADIRFQ15847 76 aa12.21□□□□□ -0.45
CHKA-206ENST00000531341 TEX43Q6ZNM6 134 aa12.21□□□□□ -0.45
CHKA-206ENST00000531341 A0A1B0GXF2 115 aa12.2□□□□□ -0.46
CHKA-206ENST00000531341 RPL37AP8A6NKH3 93 aa12.2□□□□□ -0.46
CHKA-206ENST00000531341 PRSS2P07478 247 aa12.2□□□□□ -0.46
CHKA-206ENST00000531341 RAB5AP20339 215 aa12.2□□□□□ -0.46
CHKA-206ENST00000531341 C6orf226Q5I0X4 101 aa12.2□□□□□ -0.46
CHKA-206ENST00000531341 CDIP1Q9H305 208 aa12.2□□□□□ -0.46
CHKA-206ENST00000531341 C9JQL5 133 aa12.19□□□□□ -0.46
CHKA-206ENST00000531341 Q6ZN92 141 aa12.19□□□□□ -0.46
CHKA-206ENST00000531341 LINC00167Q96N53 147 aa12.19□□□□□ -0.46
CHKA-206ENST00000531341 TP73-AS1Q9UF72 201 aa12.19□□□□□ -0.46
CHKA-206ENST00000531341 TPRXLQ17RH7 258 aa12.18□□□□□ -0.46
CHKA-206ENST00000531341 Q8IZM0 81 aa12.18□□□□□ -0.46
CHKA-206ENST00000531341 ALKBH7Q9BT30 221 aaPredicted RBP12.18□□□□□ -0.46
CHKA-206ENST00000531341 F8W036 122 aa12.17□□□□□ -0.46
CHKA-206ENST00000531341 PPBPP02775 128 aa12.17□□□□□ -0.46
CHKA-206ENST00000531341 AMELXQ99217 191 aa12.17□□□□□ -0.46
CHKA-206ENST00000531341 LOC389332A0A1B0GUA5 103 aa12.16□□□□□ -0.46
CHKA-206ENST00000531341 TMEM136Q6ZRR5 245 aa12.16□□□□□ -0.46
CHKA-206ENST00000531341 KRTAP13-1Q8IUC0 172 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms