RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
CAPN1-219ENST00000530495 LINC00862A6NCI5 91 aa8.99□□□□□ -0.97
CAPN1-219ENST00000530495 ZNF727A8MUV8 499 aa8.99□□□□□ -0.97
CAPN1-219ENST00000530495 NDUFA1O15239 70 aa8.99□□□□□ -0.97
CAPN1-219ENST00000530495 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
CAPN1-219ENST00000530495 MRPL51Q4U2R6 128 aaKnown RBP8.99□□□□□ -0.97
CAPN1-219ENST00000530495 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
CAPN1-219ENST00000530495 RPL39P62891 51 aaKnown RBP8.98□□□□□ -0.97
CAPN1-219ENST00000530495 RPL32P62910 135 aaKnown RBP8.98□□□□□ -0.97
CAPN1-219ENST00000530495 FAM104BQ5XKR9 115 aa8.98□□□□□ -0.97
CAPN1-219ENST00000530495 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
CAPN1-219ENST00000530495 KRTAP7-1Q8IUC3 87 aa8.98□□□□□ -0.97
CAPN1-219ENST00000530495 EIF5A2Q9GZV4 153 aaKnown RBP8.98□□□□□ -0.97
CAPN1-219ENST00000530495 TCAPO15273 167 aa8.97□□□□□ -0.97
CAPN1-219ENST00000530495 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
CAPN1-219ENST00000530495 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
CAPN1-219ENST00000530495 SPANXA1Q9NS26 97 aa8.97□□□□□ -0.97
CAPN1-219ENST00000530495 C6orf48Q9UBA6 75 aa8.97□□□□□ -0.97
CAPN1-219ENST00000530495 NAT8BQ9UHF3 227 aa8.97□□□□□ -0.97
CAPN1-219ENST00000530495 IFITM2Q01629 132 aa8.96□□□□□ -0.98
CAPN1-219ENST00000530495 SMDT1Q9H4I9 107 aa8.96□□□□□ -0.98
CAPN1-219ENST00000530495 SRP19P09132 144 aaKnown RBP8.95□□□□□ -0.98
CAPN1-219ENST00000530495 RAB14P61106 215 aa8.95□□□□□ -0.98
CAPN1-219ENST00000530495 GAGE2EQ4V326 116 aa8.95□□□□□ -0.98
CAPN1-219ENST00000530495 GAGE2DQ9UEU5 116 aa8.95□□□□□ -0.98
CAPN1-219ENST00000530495 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
CAPN1-219ENST00000530495 CKS2P33552 79 aa8.94□□□□□ -0.98
CAPN1-219ENST00000530495 RPL13AP40429 203 aaKnown RBP8.94□□□□□ -0.98
CAPN1-219ENST00000530495 HBBP68871 147 aa8.94□□□□□ -0.98
CAPN1-219ENST00000530495 KIAA0087Q14695 138 aa8.94□□□□□ -0.98
CAPN1-219ENST00000530495 FAM74A3Q4VXF1 159 aa8.94□□□□□ -0.98
CAPN1-219ENST00000530495 SMIM27A0A1W2PRY6 76 aa8.93□□□□□ -0.98
CAPN1-219ENST00000530495 IFITM10A6NMD0 228 aa8.93□□□□□ -0.98
CAPN1-219ENST00000530495 M0QXV9 152 aa8.93□□□□□ -0.98
CAPN1-219ENST00000530495 UBE2D1P51668 147 aa8.93□□□□□ -0.98
CAPN1-219ENST00000530495 PRR4Q16378 134 aa8.93□□□□□ -0.98
CAPN1-219ENST00000530495 SMIM2Q9BVW6 85 aa8.93□□□□□ -0.98
CAPN1-219ENST00000530495 A0A1B0GW15 77 aa8.92□□□□□ -0.98
CAPN1-219ENST00000530495 UBE2BP63146 152 aa8.92□□□□□ -0.98
CAPN1-219ENST00000530495 CLLU1Q5K131 121 aa8.92□□□□□ -0.98
CAPN1-219ENST00000530495 CARHSP1Q9Y2V2 147 aaKnown RBP8.92□□□□□ -0.98
CAPN1-219ENST00000530495 TGIF2-C20orf24A0A0A6YYL0 155 aa8.91□□□□□ -0.98
CAPN1-219ENST00000530495 TRBV30A0A0K0K1B3 111 aa8.91□□□□□ -0.98
CAPN1-219ENST00000530495 RPL23P62829 140 aaKnown RBP8.91□□□□□ -0.98
CAPN1-219ENST00000530495 NDUFC2-KCTD14E9PQ53 114 aa8.9□□□□□ -0.98
CAPN1-219ENST00000530495 C9orf129Q5T035 196 aaKnown RBP8.9□□□□□ -0.98
CAPN1-219ENST00000530495 LINC00242Q5T6M2 205 aa8.9□□□□□ -0.98
CAPN1-219ENST00000530495 D6R8Y8 96 aa8.89□□□□□ -0.99
CAPN1-219ENST00000530495 NPYP01303 97 aa8.89□□□□□ -0.99
CAPN1-219ENST00000530495 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
CAPN1-219ENST00000530495 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
CAPN1-219ENST00000530495 ZNF861PO60384 105 aa8.88□□□□□ -0.99
CAPN1-219ENST00000530495 PPBPP02775 128 aa8.88□□□□□ -0.99
CAPN1-219ENST00000530495 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
CAPN1-219ENST00000530495 A0A0U1RQV1 116 aa8.87□□□□□ -0.99
CAPN1-219ENST00000530495 F8W036 122 aa8.87□□□□□ -0.99
CAPN1-219ENST00000530495 S100A8P05109 93 aa8.87□□□□□ -0.99
CAPN1-219ENST00000530495 ADIRFQ15847 76 aa8.87□□□□□ -0.99
CAPN1-219ENST00000530495 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
CAPN1-219ENST00000530495 PACRGQ96M98 296 aaPredicted RBP8.87□□□□□ -0.99
CAPN1-219ENST00000530495 NAT8Q9UHE5 227 aa8.87□□□□□ -0.99
CAPN1-219ENST00000530495 MUC2Q02817 5179 aa8.87□□□□□ -0.99
CAPN1-219ENST00000530495 IGLV4-3A0A075B6K6 122 aa8.86□□□□□ -0.99
CAPN1-219ENST00000530495 RAB5AP20339 215 aa8.86□□□□□ -0.99
CAPN1-219ENST00000530495 A0A1B0GXF2 115 aa8.85□□□□□ -0.99
CAPN1-219ENST00000530495 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
CAPN1-219ENST00000530495 C9JQL5 133 aa8.84□□□□□ -0.99
CAPN1-219ENST00000530495 NUPR1O60356 82 aa8.84□□□□□ -0.99
CAPN1-219ENST00000530495 PEA15Q15121 130 aa8.84□□□□□ -0.99
CAPN1-219ENST00000530495 MRPL54Q6P161 138 aaKnown RBP8.84□□□□□ -0.99
CAPN1-219ENST00000530495 PRSS47A8MTI9 375 aa8.83□□□□□ -1
CAPN1-219ENST00000530495 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
CAPN1-219ENST00000530495 ORMDL3Q8N138 153 aa8.83□□□□□ -1
CAPN1-219ENST00000530495 KRTAP9-2Q9BYQ4 174 aa8.83□□□□□ -1
CAPN1-219ENST00000530495 C22orf24Q9Y442 160 aa8.83□□□□□ -1
CAPN1-219ENST00000530495 TSPAN13O95857 204 aa8.82□□□□□ -1
CAPN1-219ENST00000530495 LBHQ53QV2 105 aaPredicted RBP8.82□□□□□ -1
CAPN1-219ENST00000530495 TEX43Q6ZNM6 134 aa8.82□□□□□ -1
CAPN1-219ENST00000530495 PRELID3AQ96N28 172 aa8.82□□□□□ -1
CAPN1-219ENST00000530495 PRSS2P07478 247 aa8.81□□□□□ -1
CAPN1-219ENST00000530495 CKS1BP61024 79 aa8.81□□□□□ -1
CAPN1-219ENST00000530495 UQCC3Q6UW78 93 aa8.81□□□□□ -1
CAPN1-219ENST00000530495 Q6ZN92 141 aa8.81□□□□□ -1
CAPN1-219ENST00000530495 CTDSP1Q9GZU7 261 aa8.81□□□□□ -1
CAPN1-219ENST00000530495 C6orf226Q5I0X4 101 aa8.8□□□□□ -1
CAPN1-219ENST00000530495 LINC00469Q8N7U9 141 aa8.8□□□□□ -1
CAPN1-219ENST00000530495 AMELXQ99217 191 aa8.8□□□□□ -1
CAPN1-219ENST00000530495 C2orf88Q9BSF0 95 aa8.8□□□□□ -1
CAPN1-219ENST00000530495 A0A087X002 238 aa8.79□□□□□ -1
CAPN1-219ENST00000530495 SRSF3P84103 164 aaKnown RBP8.79□□□□□ -1
CAPN1-219ENST00000530495 NDUFA5Q16718 116 aa8.79□□□□□ -1
CAPN1-219ENST00000530495 ZC2HC1BQ5TFG8 222 aa8.79□□□□□ -1
CAPN1-219ENST00000530495 LINC00173Q6ZV60 143 aa8.79□□□□□ -1
CAPN1-219ENST00000530495 Q8IZM0 81 aa8.79□□□□□ -1
CAPN1-219ENST00000530495 VCX2Q9H322 139 aa8.79□□□□□ -1
CAPN1-219ENST00000530495 XAGE1AQ9HD64 81 aa8.79□□□□□ -1
CAPN1-219ENST00000530495 RPL28P46779 137 aaKnown RBP8.78□□□□□ -1
CAPN1-219ENST00000530495 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
CAPN1-219ENST00000530495 ATP5L2Q7Z4Y8 100 aa8.78□□□□□ -1
CAPN1-219ENST00000530495 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms