RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 C20orf78Q9BR46 151 aa12.63□□□□□ -0.39
TSPAN4-219ENST00000530404 IGHV3OR16-9A0A0B4J2B5 98 aa12.62□□□□□ -0.39
TSPAN4-219ENST00000530404 SMIM27A0A1W2PRY6 76 aa12.62□□□□□ -0.39
TSPAN4-219ENST00000530404 C9JQL5 133 aa12.62□□□□□ -0.39
TSPAN4-219ENST00000530404 PRR26Q8N8Z3 221 aa12.62□□□□□ -0.39
TSPAN4-219ENST00000530404 SMIM2Q9BVW6 85 aa12.62□□□□□ -0.39
TSPAN4-219ENST00000530404 MRPL35Q9NZE8 188 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-219ENST00000530404 TRBV24-1A0A075B6N3 115 aa12.61□□□□□ -0.39
TSPAN4-219ENST00000530404 LINC00862A6NCI5 91 aa12.61□□□□□ -0.39
TSPAN4-219ENST00000530404 D6R8Y8 96 aa12.61□□□□□ -0.39
TSPAN4-219ENST00000530404 NDUFA1O15239 70 aa12.61□□□□□ -0.39
TSPAN4-219ENST00000530404 TCAPO15273 167 aa12.61□□□□□ -0.39
TSPAN4-219ENST00000530404 MRPL54Q6P161 138 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-219ENST00000530404 UNQ6190/PRO20217Q6UXQ8 127 aa12.61□□□□□ -0.39
TSPAN4-219ENST00000530404 FAM19A5Q7Z5A7 132 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-219ENST00000530404 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
TSPAN4-219ENST00000530404 NPYP01303 97 aa12.6□□□□□ -0.39
TSPAN4-219ENST00000530404 IGLV7-43P04211 117 aa12.6□□□□□ -0.39
TSPAN4-219ENST00000530404 RPL32P62910 135 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-219ENST00000530404 C6orf48Q9UBA6 75 aa12.6□□□□□ -0.39
TSPAN4-219ENST00000530404 A0A087WZ39 114 aa12.59□□□□□ -0.39
TSPAN4-219ENST00000530404 IMMP2LQ96T52 175 aa12.59□□□□□ -0.39
TSPAN4-219ENST00000530404 NAT8Q9UHE5 227 aa12.59□□□□□ -0.39
TSPAN4-219ENST00000530404 HBBP68871 147 aa12.58□□□□□ -0.4
TSPAN4-219ENST00000530404 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.4
TSPAN4-219ENST00000530404 GAGE2EQ4V326 116 aa12.58□□□□□ -0.4
TSPAN4-219ENST00000530404 SPANXA1Q9NS26 97 aa12.58□□□□□ -0.4
TSPAN4-219ENST00000530404 GAGE2DQ9UEU5 116 aa12.58□□□□□ -0.4
TSPAN4-219ENST00000530404 MRPS36P82909 103 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-219ENST00000530404 DIRC1Q969H9 104 aa12.57□□□□□ -0.4
TSPAN4-219ENST00000530404 KRTAP7-1Q8IUC3 87 aa12.56□□□□□ -0.4
TSPAN4-219ENST00000530404 A0A1B0GW15 77 aa12.55□□□□□ -0.4
TSPAN4-219ENST00000530404 H0Y9J4 135 aa12.55□□□□□ -0.4
TSPAN4-219ENST00000530404 TLX1NBP0CAT3 122 aa12.55□□□□□ -0.4
TSPAN4-219ENST00000530404 F8WDY8 70 aa12.54□□□□□ -0.4
TSPAN4-219ENST00000530404 SMDT1Q9H4I9 107 aa12.54□□□□□ -0.4
TSPAN4-219ENST00000530404 TGIF2-C20orf24A0A0A6YYL0 155 aa12.53□□□□□ -0.4
TSPAN4-219ENST00000530404 A0A1B0GXF2 115 aa12.53□□□□□ -0.4
TSPAN4-219ENST00000530404 KIAA0087Q14695 138 aa12.53□□□□□ -0.4
TSPAN4-219ENST00000530404 F8W036 122 aa12.52□□□□□ -0.41
TSPAN4-219ENST00000530404 C2orf82Q6UX34 121 aa12.52□□□□□ -0.41
TSPAN4-219ENST00000530404 M0QXV9 152 aa12.51□□□□□ -0.41
TSPAN4-219ENST00000530404 IFI27P40305 119 aaPredicted RBP12.51□□□□□ -0.41
TSPAN4-219ENST00000530404 LINC00242Q5T6M2 205 aa12.51□□□□□ -0.41
TSPAN4-219ENST00000530404 IGLV4-3A0A075B6K6 122 aa12.5□□□□□ -0.41
TSPAN4-219ENST00000530404 S100A8P05109 93 aa12.5□□□□□ -0.41
TSPAN4-219ENST00000530404 UBE2BP63146 152 aa12.5□□□□□ -0.41
TSPAN4-219ENST00000530404 KRTAP1-4P0C5Y4 121 aa12.49□□□□□ -0.41
TSPAN4-219ENST00000530404 PEA15Q15121 130 aa12.49□□□□□ -0.41
TSPAN4-219ENST00000530404 ZC2HC1BQ5TFG8 222 aa12.49□□□□□ -0.41
TSPAN4-219ENST00000530404 PPBPP02775 128 aa12.48□□□□□ -0.41
TSPAN4-219ENST00000530404 RAB5AP20339 215 aa12.48□□□□□ -0.41
TSPAN4-219ENST00000530404 C9orf129Q5T035 196 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-219ENST00000530404 TMEM136Q6ZRR5 245 aa12.48□□□□□ -0.41
TSPAN4-219ENST00000530404 ORMDL3Q8N138 153 aa12.48□□□□□ -0.41
TSPAN4-219ENST00000530404 PRELID3AQ96N28 172 aa12.48□□□□□ -0.41
TSPAN4-219ENST00000530404 LOC389332A0A1B0GUA5 103 aa12.47□□□□□ -0.41
TSPAN4-219ENST00000530404 TMEM141Q96I45 108 aa12.47□□□□□ -0.41
TSPAN4-219ENST00000530404 PYGO1Q9Y3Y4 419 aa12.46□□□□□ -0.41
TSPAN4-219ENST00000530404 IGLV1-50A0A075B6I6 118 aa12.45□□□□□ -0.42
TSPAN4-219ENST00000530404 TRBV30A0A0K0K1B3 111 aa12.45□□□□□ -0.42
TSPAN4-219ENST00000530404 NDUFC2-KCTD14E9PQ53 114 aa12.45□□□□□ -0.42
TSPAN4-219ENST00000530404 A0A1B0GVG6 124 aa12.44□□□□□ -0.42
TSPAN4-219ENST00000530404 UBE2D1P51668 147 aa12.44□□□□□ -0.42
TSPAN4-219ENST00000530404 TEX43Q6ZNM6 134 aa12.44□□□□□ -0.42
TSPAN4-219ENST00000530404 PACRGQ96M98 296 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-219ENST00000530404 LINC00469Q8N7U9 141 aa12.43□□□□□ -0.42
TSPAN4-219ENST00000530404 LINC00173Q6ZV60 143 aa12.42□□□□□ -0.42
TSPAN4-219ENST00000530404 TOMM7Q9P0U1 55 aa12.42□□□□□ -0.42
TSPAN4-219ENST00000530404 ATP5L2Q7Z4Y8 100 aa12.41□□□□□ -0.42
TSPAN4-219ENST00000530404 PRR4Q16378 134 aa12.4□□□□□ -0.42
TSPAN4-219ENST00000530404 C2orf88Q9BSF0 95 aa12.4□□□□□ -0.42
TSPAN4-219ENST00000530404 MAP1LC3AQ9H492 121 aa12.4□□□□□ -0.42
TSPAN4-219ENST00000530404 C2orf66Q6UXQ4 117 aa12.39□□□□□ -0.43
TSPAN4-219ENST00000530404 PRSS47A8MTI9 375 aa12.38□□□□□ -0.43
TSPAN4-219ENST00000530404 PRSS2P07478 247 aa12.38□□□□□ -0.43
TSPAN4-219ENST00000530404 LINC01561Q8N1V8 128 aa12.38□□□□□ -0.43
TSPAN4-219ENST00000530404 AMELXQ99217 191 aa12.38□□□□□ -0.43
TSPAN4-219ENST00000530404 CYSLTR1Q9Y271 337 aa12.38□□□□□ -0.43
TSPAN4-219ENST00000530404 MUC2Q02817 5179 aa12.38□□□□□ -0.43
TSPAN4-219ENST00000530404 Q6ZN92 141 aa12.37□□□□□ -0.43
TSPAN4-219ENST00000530404 Q8N8P6 123 aa12.37□□□□□ -0.43
TSPAN4-219ENST00000530404 XAGE1AQ9HD64 81 aa12.37□□□□□ -0.43
TSPAN4-219ENST00000530404 CKS1BP61024 79 aa12.36□□□□□ -0.43
TSPAN4-219ENST00000530404 VCX2Q9H322 139 aa12.36□□□□□ -0.43
TSPAN4-219ENST00000530404 C22orf24Q9Y442 160 aa12.36□□□□□ -0.43
TSPAN4-219ENST00000530404 RPL13AP40429 203 aaKnown RBP12.35□□□□□ -0.43
TSPAN4-219ENST00000530404 C6orf226Q5I0X4 101 aa12.35□□□□□ -0.43
TSPAN4-219ENST00000530404 LAMTOR2Q9Y2Q5 125 aa12.35□□□□□ -0.43
TSPAN4-219ENST00000530404 ZNF861PO60384 105 aa12.34□□□□□ -0.43
TSPAN4-219ENST00000530404 ALKBH7Q9BT30 221 aaPredicted RBP12.34□□□□□ -0.43
TSPAN4-219ENST00000530404 Q8IZM0 81 aa12.33□□□□□ -0.44
TSPAN4-219ENST00000530404 IGIPA6NJ69 53 aa12.32□□□□□ -0.44
TSPAN4-219ENST00000530404 CTDSP1Q9GZU7 261 aa12.32□□□□□ -0.44
TSPAN4-219ENST00000530404 TSPAN13O95857 204 aa12.31□□□□□ -0.44
TSPAN4-219ENST00000530404 ORMDL2Q53FV1 153 aa12.31□□□□□ -0.44
TSPAN4-219ENST00000530404 CDKN2A-AS1Q9UH64 79 aa12.31□□□□□ -0.44
TSPAN4-219ENST00000530404 CARHSP1Q9Y2V2 147 aaKnown RBP12.31□□□□□ -0.44
TSPAN4-219ENST00000530404 NUPR1O60356 82 aa12.3□□□□□ -0.44
TSPAN4-219ENST00000530404 FAM19A3Q7Z5A8 133 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms