RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SMIM1B2RUZ4 78 aa10.3□□□□□ -0.76
ECHDC1-220ENST00000528402 MUSTN1Q8IVN3 82 aa10.3□□□□□ -0.76
ECHDC1-220ENST00000528402 A0A0B4J2C4 111 aa10.29□□□□□ -0.76
ECHDC1-220ENST00000528402 F5H768 121 aa10.29□□□□□ -0.76
ECHDC1-220ENST00000528402 KRTAP10-11P60412 298 aa10.29□□□□□ -0.76
ECHDC1-220ENST00000528402 SFTA2Q6UW10 78 aa10.29□□□□□ -0.76
ECHDC1-220ENST00000528402 LINC01561Q8N1V8 128 aa10.29□□□□□ -0.76
ECHDC1-220ENST00000528402 NIPBLQ6KC79 2804 aaeCLIP10.28□□□□□ -0.76
ECHDC1-220ENST00000528402 IGLV4-60A0A075B6I1 120 aa10.28□□□□□ -0.76
ECHDC1-220ENST00000528402 CFC1BP0CG36 223 aa10.28□□□□□ -0.76
ECHDC1-220ENST00000528402 CFC1P0CG37 223 aa10.28□□□□□ -0.76
ECHDC1-220ENST00000528402 MIAQ16674 131 aa10.28□□□□□ -0.76
ECHDC1-220ENST00000528402 LITAFQ99732 161 aa10.28□□□□□ -0.76
ECHDC1-220ENST00000528402 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
ECHDC1-220ENST00000528402 PRO1854Q9UHT4 67 aa10.28□□□□□ -0.76
ECHDC1-220ENST00000528402 TMEM262E9PQX1 116 aa10.27□□□□□ -0.77
ECHDC1-220ENST00000528402 DEFB4AO15263 64 aa10.27□□□□□ -0.77
ECHDC1-220ENST00000528402 APOMO95445 188 aa10.27□□□□□ -0.77
ECHDC1-220ENST00000528402 SS18Q15532 418 aa10.27□□□□□ -0.77
ECHDC1-220ENST00000528402 NAA38Q9BRA0 125 aaKnown RBP10.27□□□□□ -0.77
ECHDC1-220ENST00000528402 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.77
ECHDC1-220ENST00000528402 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
ECHDC1-220ENST00000528402 A4D1N5 150 aa10.26□□□□□ -0.77
ECHDC1-220ENST00000528402 H3BNG1 76 aa10.26□□□□□ -0.77
ECHDC1-220ENST00000528402 RBX1P62877 108 aa10.26□□□□□ -0.77
ECHDC1-220ENST00000528402 CELA1Q9UNI1 258 aa10.26□□□□□ -0.77
ECHDC1-220ENST00000528402 A0A087WZ39 114 aa10.25□□□□□ -0.77
ECHDC1-220ENST00000528402 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
ECHDC1-220ENST00000528402 LINC00959A0A1B0GUT2 108 aa10.25□□□□□ -0.77
ECHDC1-220ENST00000528402 PRSS2P07478 247 aa10.25□□□□□ -0.77
ECHDC1-220ENST00000528402 PRIMA1Q86XR5 153 aa10.25□□□□□ -0.77
ECHDC1-220ENST00000528402 C11orf68Q9H3H3 251 aaKnown RBP10.25□□□□□ -0.77
ECHDC1-220ENST00000528402 Q9H8V8 135 aa10.25□□□□□ -0.77
ECHDC1-220ENST00000528402 TENM1Q9UKZ4 2725 aa10.25□□□□□ -0.77
ECHDC1-220ENST00000528402 LELP1Q5T871 98 aa10.24□□□□□ -0.77
ECHDC1-220ENST00000528402 FLNBO75369 2602 aaKnown RBP10.24□□□□□ -0.77
ECHDC1-220ENST00000528402 TRBV20-1A0A075B6N2 111 aa10.24□□□□□ -0.77
ECHDC1-220ENST00000528402 F8W1H4 67 aa10.24□□□□□ -0.77
ECHDC1-220ENST00000528402 TSPAN13O95857 204 aa10.24□□□□□ -0.77
ECHDC1-220ENST00000528402 COX7B2Q8TF08 81 aa10.24□□□□□ -0.77
ECHDC1-220ENST00000528402 ZNF625Q96I27 306 aaPredicted RBP10.24□□□□□ -0.77
ECHDC1-220ENST00000528402 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
ECHDC1-220ENST00000528402 ERG28Q9UKR5 140 aa10.23□□□□□ -0.77
ECHDC1-220ENST00000528402 VWFP04275 2813 aa10.22□□□□□ -0.77
ECHDC1-220ENST00000528402 IGHV3-33P01772 117 aa10.21□□□□□ -0.78
ECHDC1-220ENST00000528402 IGKV3OR2-268A0A0C4DH90 116 aa10.2□□□□□ -0.78
ECHDC1-220ENST00000528402 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
ECHDC1-220ENST00000528402 A0A096LPF7 62 aa10.19□□□□□ -0.78
ECHDC1-220ENST00000528402 HTN3P15516 51 aa10.19□□□□□ -0.78
ECHDC1-220ENST00000528402 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
ECHDC1-220ENST00000528402 CD164L2Q6UWJ8 174 aa10.18□□□□□ -0.78
ECHDC1-220ENST00000528402 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
ECHDC1-220ENST00000528402 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
ECHDC1-220ENST00000528402 SCGB1C2P0DMR2 95 aa10.17□□□□□ -0.78
ECHDC1-220ENST00000528402 TRBV30A0A0K0K1B3 111 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 IBA57-AS1B1ANH7 110 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 G3V4G9 280 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 Q8IZM0 81 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 K7ERU9 68 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 ANGP03950 147 aaKnown RBP10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 PSMB2P49721 201 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 REG3AQ06141 175 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 LYPD5Q6UWN5 251 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 C5orf38Q86SI9 138 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 LINC00269Q8N2A0 174 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 TOMM7Q9P0U1 55 aa10.16□□□□□ -0.78
ECHDC1-220ENST00000528402 H3BMG7 143 aa10.15□□□□□ -0.79
ECHDC1-220ENST00000528402 COX6CP09669 75 aa10.15□□□□□ -0.79
ECHDC1-220ENST00000528402 CXCL5P42830 114 aa10.15□□□□□ -0.79
ECHDC1-220ENST00000528402 OCIAD2Q56VL3 154 aa10.15□□□□□ -0.79
ECHDC1-220ENST00000528402 C6orf226Q5I0X4 101 aa10.15□□□□□ -0.79
ECHDC1-220ENST00000528402 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
ECHDC1-220ENST00000528402 XCL1P47992 114 aa10.14□□□□□ -0.79
ECHDC1-220ENST00000528402 Q1RN00 199 aa10.14□□□□□ -0.79
ECHDC1-220ENST00000528402 COX7A2LO14548 114 aa10.13□□□□□ -0.79
ECHDC1-220ENST00000528402 KPRPQ5T749 579 aaPredicted RBP10.13□□□□□ -0.79
ECHDC1-220ENST00000528402 CHCHD10Q8WYQ3 142 aaPredicted RBP10.13□□□□□ -0.79
ECHDC1-220ENST00000528402 SPATA25Q9BR10 227 aa10.13□□□□□ -0.79
ECHDC1-220ENST00000528402 RETNQ9HD89 108 aa10.13□□□□□ -0.79
ECHDC1-220ENST00000528402 C11orf45Q8TAV5 145 aa10.12□□□□□ -0.79
ECHDC1-220ENST00000528402 PRR34Q9NV39 138 aa10.12□□□□□ -0.79
ECHDC1-220ENST00000528402 TRAV8-4A0A0B4J246 113 aa10.11□□□□□ -0.79
ECHDC1-220ENST00000528402 CYSRT1A8MQ03 144 aa10.11□□□□□ -0.79
ECHDC1-220ENST00000528402 A0A0J9YWU9 116 aa10.1□□□□□ -0.79
ECHDC1-220ENST00000528402 MALP21145 153 aa10.1□□□□□ -0.79
ECHDC1-220ENST00000528402 LINC00158P58513 81 aa10.1□□□□□ -0.79
ECHDC1-220ENST00000528402 NPC2P61916 151 aa10.1□□□□□ -0.79
ECHDC1-220ENST00000528402 Q6ZTC4 211 aa10.1□□□□□ -0.79
ECHDC1-220ENST00000528402 DAND5Q8N907 189 aa10.1□□□□□ -0.79
ECHDC1-220ENST00000528402 PRO0461Q9UI25 63 aa10.1□□□□□ -0.79
ECHDC1-220ENST00000528402 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
ECHDC1-220ENST00000528402 TRAV13-2A0A0B4J235 113 aa10.09□□□□□ -0.79
ECHDC1-220ENST00000528402 TCL1BO95988 128 aa10.09□□□□□ -0.79
ECHDC1-220ENST00000528402 COX17Q14061 63 aa10.09□□□□□ -0.79
ECHDC1-220ENST00000528402 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
ECHDC1-220ENST00000528402 CFAP161Q6P656 301 aa10.09□□□□□ -0.79
ECHDC1-220ENST00000528402 KLK5Q9Y337 293 aaPredicted RBP10.09□□□□□ -0.79
ECHDC1-220ENST00000528402 BAHCC1Q9P281 2608 aa10.09□□□□□ -0.79
ECHDC1-220ENST00000528402 H7C2G1 150 aa10.08□□□□□ -0.8
ECHDC1-220ENST00000528402 J3QR89 54 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms