RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 HIST1H2BDP58876 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST1H2BCP62807 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST2H2BEQ16778 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST1H2BHQ93079 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 AMELXQ99217 191 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST1H2BNQ99877 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST1H2BMQ99879 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 IGKV2D-24A0A075B6R9 120 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 TRAV8-4A0A0B4J246 113 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 PMCHL1Q16048 86 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 PDZD11Q5EBL8 140 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 FA2HQ7L5A8 372 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 SCXQ7RTU7 201 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 BAALCQ8WXS3 180 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 TMEM101Q96IK0 257 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 AP5S1Q9NUS5 200 aa7.09□□□□□ -1.27
NEDD8-204ENST00000526430 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
NEDD8-204ENST00000526430 FOXI1Q12951 378 aa7.08□□□□□ -1.28
NEDD8-204ENST00000526430 DGAT2L7PQ6IED9 249 aa7.08□□□□□ -1.28
NEDD8-204ENST00000526430 PSCAO43653 123 aa7.07□□□□□ -1.28
NEDD8-204ENST00000526430 SERF1AO75920 110 aa7.07□□□□□ -1.28
NEDD8-204ENST00000526430 CRPP02741 224 aa7.07□□□□□ -1.28
NEDD8-204ENST00000526430 NPSP0C0P6 89 aa7.07□□□□□ -1.28
NEDD8-204ENST00000526430 ERASQ7Z444 233 aa7.07□□□□□ -1.28
NEDD8-204ENST00000526430 CHCHD10Q8WYQ3 142 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-204ENST00000526430 CHCHD1Q96BP2 118 aaKnown RBP7.07□□□□□ -1.28
NEDD8-204ENST00000526430 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
NEDD8-204ENST00000526430 C1orf43Q9BWL3 253 aa7.07□□□□□ -1.28
NEDD8-204ENST00000526430 TM2D2Q9BX73 214 aa7.07□□□□□ -1.28
NEDD8-204ENST00000526430 GAGE12HA6NDE8 117 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 LECT2O14960 151 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 CCL25O15444 150 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 RAB5BP61020 215 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 COX6A2Q02221 97 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 LINC00242Q5T6M2 205 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 TMEM141Q96I45 108 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 SCGB3A1Q96QR1 104 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 COX11Q9Y6N1 276 aa7.06□□□□□ -1.28
NEDD8-204ENST00000526430 TRAV13-1A0A0B4J241 112 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 IGHV3OR16-9A0A0B4J2B5 98 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 HBDP02042 147 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 SLPIP03973 132 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 G0S2P27469 103 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 UBE2D1P51668 147 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 FAM19A3Q7Z5A8 133 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 BAGE3Q86Y29 109 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 RMI2Q96E14 147 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 CHAC1Q9BUX1 264 aa7.05□□□□□ -1.28
NEDD8-204ENST00000526430 C1orf196B1AJZ1 125 aa7.04□□□□□ -1.28
NEDD8-204ENST00000526430 PRSS1P07477 247 aa7.04□□□□□ -1.28
NEDD8-204ENST00000526430 XCL1P47992 114 aa7.04□□□□□ -1.28
NEDD8-204ENST00000526430 SMAGPQ0VAQ4 97 aa7.04□□□□□ -1.28
NEDD8-204ENST00000526430 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
NEDD8-204ENST00000526430 CD164L2Q6UWJ8 174 aa7.04□□□□□ -1.28
NEDD8-204ENST00000526430 C15orf56Q8N910 161 aa7.04□□□□□ -1.28
NEDD8-204ENST00000526430 USP17L23D6RBM5 183 aa7.03□□□□□ -1.28
NEDD8-204ENST00000526430 HNRNPA3P51991 378 aaKnown RBP7.03□□□□□ -1.28
NEDD8-204ENST00000526430 SS18Q15532 418 aa7.03□□□□□ -1.28
NEDD8-204ENST00000526430 VCX2Q9H322 139 aa7.03□□□□□ -1.28
NEDD8-204ENST00000526430 CST9LQ9H4G1 147 aa7.03□□□□□ -1.28
NEDD8-204ENST00000526430 LINC01549A6NIU2 74 aa7.02□□□□□ -1.29
NEDD8-204ENST00000526430 IFITM10A6NMD0 228 aa7.02□□□□□ -1.29
NEDD8-204ENST00000526430 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
NEDD8-204ENST00000526430 A0A0J9YXV3 536 aa7.01□□□□□ -1.29
NEDD8-204ENST00000526430 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
NEDD8-204ENST00000526430 CIRBP-AS1Q8TBR5 109 aa7.01□□□□□ -1.29
NEDD8-204ENST00000526430 IGLV4-69A0A075B6H9 119 aa7□□□□□ -1.29
NEDD8-204ENST00000526430 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7□□□□□ -1.29
NEDD8-204ENST00000526430 HSBP1O75506 76 aa7□□□□□ -1.29
NEDD8-204ENST00000526430 RPL37AP61513 92 aaKnown RBP7□□□□□ -1.29
NEDD8-204ENST00000526430 PMVKQ15126 192 aa7□□□□□ -1.29
NEDD8-204ENST00000526430 Q6ZRU5 148 aa7□□□□□ -1.29
NEDD8-204ENST00000526430 FAT4Q6V0I7 4981 aa7□□□□□ -1.29
NEDD8-204ENST00000526430 GVQW2A0A096LPI5 108 aaPredicted RBP6.99□□□□□ -1.29
NEDD8-204ENST00000526430 NDUFA6P56556 154 aa6.99□□□□□ -1.29
NEDD8-204ENST00000526430 IFI27L1Q96BM0 104 aa6.99□□□□□ -1.29
NEDD8-204ENST00000526430 LINC00526Q96FQ7 95 aa6.99□□□□□ -1.29
NEDD8-204ENST00000526430 IGLV5-45A0A087WSX0 123 aa6.98□□□□□ -1.29
NEDD8-204ENST00000526430 A0A087WZ39 114 aa6.98□□□□□ -1.29
NEDD8-204ENST00000526430 ATP5LO75964 103 aa6.98□□□□□ -1.29
NEDD8-204ENST00000526430 KIAA0087Q14695 138 aa6.98□□□□□ -1.29
NEDD8-204ENST00000526430 PAPPA-AS1Q5QFB9 102 aa6.98□□□□□ -1.29
NEDD8-204ENST00000526430 Q6ZN92 141 aa6.98□□□□□ -1.29
NEDD8-204ENST00000526430 CDKN2A-AS1Q9UH64 79 aa6.98□□□□□ -1.29
NEDD8-204ENST00000526430 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.97□□□□□ -1.29
NEDD8-204ENST00000526430 IGHV3-64A0A075B6Q5 118 aa6.97□□□□□ -1.29
NEDD8-204ENST00000526430 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
NEDD8-204ENST00000526430 A6NJY4 79 aa6.97□□□□□ -1.29
NEDD8-204ENST00000526430 COX7A2LO14548 114 aa6.97□□□□□ -1.29
NEDD8-204ENST00000526430 IGLC3P0DOY3 106 aa6.97□□□□□ -1.29
NEDD8-204ENST00000526430 LINC01620Q4KN68 170 aa6.97□□□□□ -1.29
NEDD8-204ENST00000526430 HIGD2BQ4VC39 106 aa6.97□□□□□ -1.29
NEDD8-204ENST00000526430 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
NEDD8-204ENST00000526430 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
NEDD8-204ENST00000526430 IGHV1-58A0A0C4DH39 117 aa6.96□□□□□ -1.3
NEDD8-204ENST00000526430 LEPROTL1O95214 131 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms