RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 HSBP1O75506 76 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 ATP5LO75964 103 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 PRSS2P07478 247 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 UBE2D1P51668 147 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 NDUFA6P56556 154 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC00242Q5T6M2 205 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 Q6ZSA8 131 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 Q8N1X5 172 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 CHCHD1Q96BP2 118 aaKnown RBP3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 C2orf48Q96LS8 159 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 AMELXQ99217 191 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 CHAC1Q9BUX1 264 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 A0A087WZ39 114 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 EPM2AB3EWF7 344 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 H3BRM9 83 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 NDUFA1O15239 70 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 TRGC2P03986 189 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 XGP55808 180 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 CKS1BP61024 79 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 HAMPP81172 84 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 PMVKQ15126 192 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC00173Q6ZV60 143 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 SCXQ7RTU7 201 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC01561Q8N1V8 128 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC00469Q8N7U9 141 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 FRAS1Q86XX4 4008 aa3.49□□□□□ -1.85
HMGB1P40-201ENST00000525121 DNAH10Q8IVF4 4471 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 IGKV2-24A0A0C4DH68 120 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 LOC107984640A0A0U1RRK4 108 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 TINCRA0A1B0GVN0 87 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 SMR3BP02814 79 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 PLA2G1BP04054 148 aaKnown RBP3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 COX6A2Q02221 97 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 PMCHL1Q16048 86 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 MAJINQ3KP22 176 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 ZC2HC1BQ5TFG8 222 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 SDIM1Q6ZPB5 146 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 FAM19A3Q7Z5A8 133 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 FAM104AQ969W3 186 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC00526Q96FQ7 95 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 CST9LQ9H4G1 147 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 FAM30AQ9NZY2 134 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 TOMM7Q9P0U1 55 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
HMGB1P40-201ENST00000525121 DNAH2Q9P225 4427 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 A0A0J9YXV3 536 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 COLCA2A8K830 154 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 SLPIP03973 132 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 CXCL5P42830 114 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 RPL18AQ02543 176 aaKnown RBP3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 GAGE2BQ13066 116 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 RNF151Q2KHN1 245 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 PDZD11Q5EBL8 140 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 C6orf226Q5I0X4 101 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 Q5VSD8 79 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 Q6ZRU5 148 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 Q8IZM0 81 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC00528Q8N1L1 170 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 CIRBP-AS1Q8TBR5 109 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 SPACA4Q8TDM5 124 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 C7orf33Q8WU49 177 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 URB1-AS1Q96HZ7 61 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 MRPL35Q9NZE8 188 aaKnown RBP3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 CDKN2A-AS1Q9UH64 79 aa3.47□□□□□ -1.85
HMGB1P40-201ENST00000525121 DNAH17Q9UFH2 4485 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 A0A096LNJ9 63 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 TRBV30A0A0K0K1B3 111 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 SCO1O75880 301 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 SERF1AO75920 110 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 LEPROTL1O95214 131 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 CHTF8P0CG12 524 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 S100A1P23297 94 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 STPG4Q8N801 248 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 IFI27L1Q96BM0 104 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 HSPB8Q9UJY1 196 aa3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 CHTOPQ9Y3Y2 248 aaKnown RBP3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P40-201ENST00000525121 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 IGLV5-45A0A087WSX0 123 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 A0A087WYN8 130 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 A0A096LNI7 61 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 TRAV12-1A0A0B4J245 112 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 SMIM1B2RUZ4 78 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 F8VRH5 84 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 H0Y8G0 127 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 SPINK8P0C7L1 97 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 IGLC3P0DOY3 106 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 PTTG1IPP53801 180 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 RPL37AP61513 92 aaKnown RBP3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 CIRBPQ14011 172 aaKnown RBP3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 TMEM170BQ5T4T1 132 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 SFTA2Q6UW10 78 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 UNQ6190/PRO20217Q6UXQ8 127 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 FAM19A2Q8N3H0 131 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
HMGB1P40-201ENST00000525121 PKD1P98161 4303 aa3.44□□□□□ -1.86
HMGB1P40-201ENST00000525121 PKHD1P08F94 4074 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms