RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TRBV7-7A0A0K0K1E9 115 aa9.38□□□□□ -0.91
CAPN1-202ENST00000524773 A0A087WYN8 130 aa9.38□□□□□ -0.91
CAPN1-202ENST00000524773 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
CAPN1-202ENST00000524773 FAM240AA0A1B0GVK7 77 aa9.38□□□□□ -0.91
CAPN1-202ENST00000524773 SLPIP03973 132 aa9.38□□□□□ -0.91
CAPN1-202ENST00000524773 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
CAPN1-202ENST00000524773 SDIM1Q6ZPB5 146 aa9.38□□□□□ -0.91
CAPN1-202ENST00000524773 LINC00337Q8N6G1 96 aa9.38□□□□□ -0.91
CAPN1-202ENST00000524773 IGLV5-45A0A087WSX0 123 aa9.37□□□□□ -0.91
CAPN1-202ENST00000524773 TIMM17BO60830 172 aa9.37□□□□□ -0.91
CAPN1-202ENST00000524773 HERVK_113P63121 156 aa9.37□□□□□ -0.91
CAPN1-202ENST00000524773 MTORP42345 2549 aa9.37□□□□□ -0.91
CAPN1-202ENST00000524773 MIR7-3HGQ8N6C7 128 aa9.37□□□□□ -0.91
CAPN1-202ENST00000524773 C14orf132Q9NPU4 83 aa9.37□□□□□ -0.91
CAPN1-202ENST00000524773 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 PFN2P35080 140 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
CAPN1-202ENST00000524773 C9orf153Q5TBE3 101 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 VPREB3Q9UKI3 123 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 APCP25054 2843 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 F5H768 121 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 INSP01308 110 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 C1orf158Q8N1D5 194 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 FAM110AQ9BQ89 295 aa9.36□□□□□ -0.91
CAPN1-202ENST00000524773 NOP10Q9NPE3 64 aaKnown RBP9.36□□□□□ -0.91
CAPN1-202ENST00000524773 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
CAPN1-202ENST00000524773 IGKV2-28A0A075B6P5 120 aa9.34□□□□□ -0.91
CAPN1-202ENST00000524773 A0A087WVE0 104 aa9.34□□□□□ -0.91
CAPN1-202ENST00000524773 IGKV2D-28P01615 120 aa9.34□□□□□ -0.91
CAPN1-202ENST00000524773 PF4P02776 101 aa9.34□□□□□ -0.91
CAPN1-202ENST00000524773 CDC42SE2Q9NRR3 84 aa9.34□□□□□ -0.91
CAPN1-202ENST00000524773 LINC00158P58513 81 aa9.34□□□□□ -0.91
CAPN1-202ENST00000524773 KRTAP10-9P60411 292 aa9.34□□□□□ -0.91
CAPN1-202ENST00000524773 ACANP16112 2415 aa9.34□□□□□ -0.91
CAPN1-202ENST00000524773 ODF3L2Q3SX64 289 aa9.33□□□□□ -0.92
CAPN1-202ENST00000524773 J3QLI3 93 aa9.33□□□□□ -0.92
CAPN1-202ENST00000524773 RPL36AP83881 106 aaKnown RBP9.33□□□□□ -0.92
CAPN1-202ENST00000524773 DEFB114Q30KQ6 69 aa9.33□□□□□ -0.92
CAPN1-202ENST00000524773 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
CAPN1-202ENST00000524773 RPL36ALQ969Q0 106 aaKnown RBP9.33□□□□□ -0.92
CAPN1-202ENST00000524773 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
CAPN1-202ENST00000524773 NCR3O14931 201 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 LINC01356Q8N9X3 169 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 K7EQD1 137 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 UBE2L6O14933 153 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 MALP21145 153 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 LINC00643Q86TS7 51 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 STHQ8IWL8 128 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 OR13C6PQ8NH95 151 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 DNAJC30Q96LL9 226 aa9.32□□□□□ -0.92
CAPN1-202ENST00000524773 HELZ2Q9BYK8 2649 aaKnown RBP9.31□□□□□ -0.92
CAPN1-202ENST00000524773 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
CAPN1-202ENST00000524773 A8MTW9 85 aa9.31□□□□□ -0.92
CAPN1-202ENST00000524773 CRPP02741 224 aa9.31□□□□□ -0.92
CAPN1-202ENST00000524773 HIST2H2BCQ6DN03 193 aa9.3□□□□□ -0.92
CAPN1-202ENST00000524773 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
CAPN1-202ENST00000524773 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
CAPN1-202ENST00000524773 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
CAPN1-202ENST00000524773 KMT2BQ9UMN6 2715 aaPredicted RBP9.3□□□□□ -0.92
CAPN1-202ENST00000524773 TENM4Q6N022 2769 aa9.3□□□□□ -0.92
CAPN1-202ENST00000524773 LECT2O14960 151 aa9.3□□□□□ -0.92
CAPN1-202ENST00000524773 TRACP01848 142 aa9.3□□□□□ -0.92
CAPN1-202ENST00000524773 C3orf22Q8N5N4 141 aa9.3□□□□□ -0.92
CAPN1-202ENST00000524773 TRGV2A0A075B6R0 118 aa9.29□□□□□ -0.92
CAPN1-202ENST00000524773 A0A096LNT2 108 aa9.29□□□□□ -0.92
CAPN1-202ENST00000524773 hADV29S1A0JD25 119 aa9.29□□□□□ -0.92
CAPN1-202ENST00000524773 DEFB113Q30KQ7 82 aa9.29□□□□□ -0.92
CAPN1-202ENST00000524773 Q6YL49 198 aa9.29□□□□□ -0.92
CAPN1-202ENST00000524773 DNAL4O96015 105 aa9.28□□□□□ -0.92
CAPN1-202ENST00000524773 CCL18P55774 89 aa9.28□□□□□ -0.92
CAPN1-202ENST00000524773 WFDC9Q8NEX5 89 aa9.28□□□□□ -0.92
CAPN1-202ENST00000524773 COX7B2Q8TF08 81 aa9.28□□□□□ -0.92
CAPN1-202ENST00000524773 CR1P17927 2039 aa9.28□□□□□ -0.92
CAPN1-202ENST00000524773 PAX4O43316 350 aa9.28□□□□□ -0.92
CAPN1-202ENST00000524773 ACYP1P07311 99 aa9.28□□□□□ -0.92
CAPN1-202ENST00000524773 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
CAPN1-202ENST00000524773 PEMTQ9UBM1 199 aa9.27□□□□□ -0.92
CAPN1-202ENST00000524773 ITPR3Q14573 2671 aa9.27□□□□□ -0.92
CAPN1-202ENST00000524773 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
CAPN1-202ENST00000524773 FLNAP21333 2647 aaKnown RBP9.27□□□□□ -0.93
CAPN1-202ENST00000524773 A0A096LPF7 62 aa9.27□□□□□ -0.93
CAPN1-202ENST00000524773 RNASE1P07998 156 aaKnown RBP9.26□□□□□ -0.93
CAPN1-202ENST00000524773 LRRC75A-AS1Q8N1F1 130 aa9.25□□□□□ -0.93
CAPN1-202ENST00000524773 RPL28P46779 137 aaKnown RBP9.25□□□□□ -0.93
CAPN1-202ENST00000524773 J3QKU1 62 aa9.24□□□□□ -0.93
CAPN1-202ENST00000524773 TRAV13-2A0A0B4J235 113 aa9.24□□□□□ -0.93
CAPN1-202ENST00000524773 UQCRQO14949 82 aa9.24□□□□□ -0.93
CAPN1-202ENST00000524773 XCL1P47992 114 aa9.24□□□□□ -0.93
CAPN1-202ENST00000524773 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
CAPN1-202ENST00000524773 C2orf48Q96LS8 159 aa9.24□□□□□ -0.93
CAPN1-202ENST00000524773 IMUPQ9GZP8 106 aa9.24□□□□□ -0.93
CAPN1-202ENST00000524773 TMEM126AQ9H061 195 aa9.24□□□□□ -0.93
CAPN1-202ENST00000524773 A0A1B0GX51 115 aa9.23□□□□□ -0.93
CAPN1-202ENST00000524773 IGHV4-31P0DP07 118 aa9.23□□□□□ -0.93
CAPN1-202ENST00000524773 KIR2DL5BQ8NHK3 375 aa9.23□□□□□ -0.93
CAPN1-202ENST00000524773 TRGV4A0A0C4DH28 118 aa9.23□□□□□ -0.93
CAPN1-202ENST00000524773 HILS1P60008 231 aa9.23□□□□□ -0.93
CAPN1-202ENST00000524773 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms