RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 TMEM18Q96B42 140 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 KIR2DL4Q99706 377 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 SMDT1Q9H4I9 107 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 GAGE2DQ9UEU5 116 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 M0QXV9 152 aa8.74□□□□□ -1.01
CSTF3-204ENST00000524556 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
CSTF3-204ENST00000524556 FAM104AQ969W3 186 aa8.73□□□□□ -1.01
CSTF3-204ENST00000524556 MUC17Q685J3 4493 aa8.72□□□□□ -1.01
CSTF3-204ENST00000524556 PPP1R2P9O14990 202 aa8.72□□□□□ -1.01
CSTF3-204ENST00000524556 TSPAN13O95857 204 aa8.72□□□□□ -1.01
CSTF3-204ENST00000524556 RPL39P62891 51 aaKnown RBP8.71□□□□□ -1.02
CSTF3-204ENST00000524556 ZNF861PO60384 105 aa8.7□□□□□ -1.02
CSTF3-204ENST00000524556 RIGQ13278 110 aa8.7□□□□□ -1.02
CSTF3-204ENST00000524556 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
CSTF3-204ENST00000524556 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
CSTF3-204ENST00000524556 C9orf129Q5T035 196 aaKnown RBP8.69□□□□□ -1.02
CSTF3-204ENST00000524556 SLC51BQ86UW2 128 aa8.69□□□□□ -1.02
CSTF3-204ENST00000524556 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
CSTF3-204ENST00000524556 NDUFC2-KCTD14E9PQ53 114 aa8.68□□□□□ -1.02
CSTF3-204ENST00000524556 TCAPO15273 167 aa8.68□□□□□ -1.02
CSTF3-204ENST00000524556 CEBPGP53567 150 aa8.68□□□□□ -1.02
CSTF3-204ENST00000524556 MRPL51Q4U2R6 128 aaKnown RBP8.68□□□□□ -1.02
CSTF3-204ENST00000524556 LINC01551Q86U37 167 aa8.68□□□□□ -1.02
CSTF3-204ENST00000524556 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
CSTF3-204ENST00000524556 OSTCQ9NRP0 149 aa8.68□□□□□ -1.02
CSTF3-204ENST00000524556 SPANXA1Q9NS26 97 aa8.68□□□□□ -1.02
CSTF3-204ENST00000524556 TRBV24-1A0A075B6N3 115 aa8.67□□□□□ -1.02
CSTF3-204ENST00000524556 IFITM10A6NMD0 228 aa8.67□□□□□ -1.02
CSTF3-204ENST00000524556 RPL32P62910 135 aaKnown RBP8.67□□□□□ -1.02
CSTF3-204ENST00000524556 HBBP68871 147 aa8.67□□□□□ -1.02
CSTF3-204ENST00000524556 FAM104BQ5XKR9 115 aa8.67□□□□□ -1.02
CSTF3-204ENST00000524556 TGIF2-C20orf24A0A0A6YYL0 155 aa8.66□□□□□ -1.02
CSTF3-204ENST00000524556 NUPR1O60356 82 aa8.66□□□□□ -1.02
CSTF3-204ENST00000524556 C2orf82Q6UX34 121 aa8.66□□□□□ -1.02
CSTF3-204ENST00000524556 A0A087X002 238 aa8.65□□□□□ -1.02
CSTF3-204ENST00000524556 LINC00862A6NCI5 91 aa8.65□□□□□ -1.02
CSTF3-204ENST00000524556 SMIM7Q9BQ49 75 aa8.65□□□□□ -1.02
CSTF3-204ENST00000524556 V9GYV3 84 aa8.65□□□□□ -1.02
CSTF3-204ENST00000524556 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
CSTF3-204ENST00000524556 TNFRSF6BO95407 300 aa8.63□□□□□ -1.03
CSTF3-204ENST00000524556 CKS2P33552 79 aa8.63□□□□□ -1.03
CSTF3-204ENST00000524556 LINC00242Q5T6M2 205 aa8.63□□□□□ -1.03
CSTF3-204ENST00000524556 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
CSTF3-204ENST00000524556 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
CSTF3-204ENST00000524556 CTDSP1Q9GZU7 261 aa8.63□□□□□ -1.03
CSTF3-204ENST00000524556 C22orf24Q9Y442 160 aa8.63□□□□□ -1.03
CSTF3-204ENST00000524556 CRYGAP11844 174 aa8.62□□□□□ -1.03
CSTF3-204ENST00000524556 BLOC1S1P78537 153 aa8.62□□□□□ -1.03
CSTF3-204ENST00000524556 NAT8BQ9UHF3 227 aa8.62□□□□□ -1.03
CSTF3-204ENST00000524556 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
CSTF3-204ENST00000524556 LBHQ53QV2 105 aaPredicted RBP8.61□□□□□ -1.03
CSTF3-204ENST00000524556 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
CSTF3-204ENST00000524556 FAM74A3Q4VXF1 159 aa8.6□□□□□ -1.03
CSTF3-204ENST00000524556 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
CSTF3-204ENST00000524556 IFI27P40305 119 aaPredicted RBP8.59□□□□□ -1.03
CSTF3-204ENST00000524556 TCTE3Q8IZS6 198 aa8.59□□□□□ -1.03
CSTF3-204ENST00000524556 LINC00469Q8N7U9 141 aa8.59□□□□□ -1.03
CSTF3-204ENST00000524556 EIF5A2Q9GZV4 153 aaKnown RBP8.59□□□□□ -1.03
CSTF3-204ENST00000524556 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
CSTF3-204ENST00000524556 IGLV4-3A0A075B6K6 122 aa8.58□□□□□ -1.04
CSTF3-204ENST00000524556 A0A1B0GW15 77 aa8.58□□□□□ -1.04
CSTF3-204ENST00000524556 D6R8Y8 96 aa8.58□□□□□ -1.04
CSTF3-204ENST00000524556 BCE1O60756 84 aa8.58□□□□□ -1.04
CSTF3-204ENST00000524556 NPYP01303 97 aa8.58□□□□□ -1.04
CSTF3-204ENST00000524556 RETNLBQ9BQ08 111 aa8.58□□□□□ -1.04
CSTF3-204ENST00000524556 SMIM27A0A1W2PRY6 76 aa8.57□□□□□ -1.04
CSTF3-204ENST00000524556 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
CSTF3-204ENST00000524556 ALKAL2Q6UX46 152 aa8.57□□□□□ -1.04
CSTF3-204ENST00000524556 TMEM141Q96I45 108 aa8.57□□□□□ -1.04
CSTF3-204ENST00000524556 CDIP1Q9H305 208 aa8.57□□□□□ -1.04
CSTF3-204ENST00000524556 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
CSTF3-204ENST00000524556 TP73-AS1Q9UF72 201 aa8.57□□□□□ -1.04
CSTF3-204ENST00000524556 PRSS2P07478 247 aa8.56□□□□□ -1.04
CSTF3-204ENST00000524556 CKS1BP61024 79 aa8.56□□□□□ -1.04
CSTF3-204ENST00000524556 TPRXLQ17RH7 258 aa8.56□□□□□ -1.04
CSTF3-204ENST00000524556 KRTAP13-2Q52LG2 175 aa8.56□□□□□ -1.04
CSTF3-204ENST00000524556 MRPL55Q7Z7F7 128 aaKnown RBP8.56□□□□□ -1.04
CSTF3-204ENST00000524556 ANAPC11Q9NYG5 84 aa8.56□□□□□ -1.04
CSTF3-204ENST00000524556 RAB5AP20339 215 aa8.55□□□□□ -1.04
CSTF3-204ENST00000524556 Q6ZN92 141 aa8.55□□□□□ -1.04
CSTF3-204ENST00000524556 TEX43Q6ZNM6 134 aa8.55□□□□□ -1.04
CSTF3-204ENST00000524556 F8W036 122 aa8.54□□□□□ -1.04
CSTF3-204ENST00000524556 PPBPP02775 128 aa8.54□□□□□ -1.04
CSTF3-204ENST00000524556 RPL23P62829 140 aaKnown RBP8.54□□□□□ -1.04
CSTF3-204ENST00000524556 C6orf226Q5I0X4 101 aa8.54□□□□□ -1.04
CSTF3-204ENST00000524556 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
CSTF3-204ENST00000524556 S100A8P05109 93 aa8.53□□□□□ -1.04
CSTF3-204ENST00000524556 Q8IZM0 81 aa8.53□□□□□ -1.04
CSTF3-204ENST00000524556 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
CSTF3-204ENST00000524556 C2orf88Q9BSF0 95 aa8.53□□□□□ -1.04
CSTF3-204ENST00000524556 IGLV7-46A0A075B6I9 117 aa8.52□□□□□ -1.05
CSTF3-204ENST00000524556 ZC2HC1BQ5TFG8 222 aa8.52□□□□□ -1.05
CSTF3-204ENST00000524556 MRPL54Q6P161 138 aaKnown RBP8.52□□□□□ -1.05
CSTF3-204ENST00000524556 LINC00167Q96N53 147 aa8.52□□□□□ -1.05
CSTF3-204ENST00000524556 ALKBH7Q9BT30 221 aaPredicted RBP8.52□□□□□ -1.05
CSTF3-204ENST00000524556 RPL37AP8A6NKH3 93 aa8.51□□□□□ -1.05
CSTF3-204ENST00000524556 ADIRFQ15847 76 aa8.51□□□□□ -1.05
CSTF3-204ENST00000524556 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
CSTF3-204ENST00000524556 LINC00173Q6ZV60 143 aa8.51□□□□□ -1.05
CSTF3-204ENST00000524556 AMELXQ99217 191 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms