RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
CCNC-213ENST00000523541 Q8N8P6 123 aa10.94□□□□□ -0.66
CCNC-213ENST00000523541 FAM104AQ969W3 186 aa10.94□□□□□ -0.66
CCNC-213ENST00000523541 NPSP0C0P6 89 aa10.93□□□□□ -0.66
CCNC-213ENST00000523541 RNASE13Q5GAN3 156 aaKnown RBP10.93□□□□□ -0.66
CCNC-213ENST00000523541 OR10D4PQ8NGN7 298 aa10.93□□□□□ -0.66
CCNC-213ENST00000523541 IGLV4-69A0A075B6H9 119 aa10.92□□□□□ -0.66
CCNC-213ENST00000523541 IGHV3OR16-9A0A0B4J2B5 98 aa10.92□□□□□ -0.66
CCNC-213ENST00000523541 ORMDL2Q53FV1 153 aa10.92□□□□□ -0.66
CCNC-213ENST00000523541 C7orf33Q8WU49 177 aa10.92□□□□□ -0.66
CCNC-213ENST00000523541 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
CCNC-213ENST00000523541 NXT2Q9NPJ8 142 aaKnown RBP10.92□□□□□ -0.66
CCNC-213ENST00000523541 ADCYAP1P18509 176 aa10.91□□□□□ -0.66
CCNC-213ENST00000523541 C5orf38Q86SI9 138 aa10.91□□□□□ -0.66
CCNC-213ENST00000523541 LOC389332A0A1B0GUA5 103 aa10.9□□□□□ -0.66
CCNC-213ENST00000523541 IFITM10A6NMD0 228 aa10.9□□□□□ -0.66
CCNC-213ENST00000523541 RNF151Q2KHN1 245 aa10.9□□□□□ -0.66
CCNC-213ENST00000523541 TMEM141Q96I45 108 aa10.9□□□□□ -0.66
CCNC-213ENST00000523541 CYSLTR1Q9Y271 337 aa10.9□□□□□ -0.66
CCNC-213ENST00000523541 PKHD1L1Q86WI1 4243 aa10.89□□□□□ -0.67
CCNC-213ENST00000523541 A0A096LNI7 61 aa10.89□□□□□ -0.67
CCNC-213ENST00000523541 LOC107984640A0A0U1RRK4 108 aa10.89□□□□□ -0.67
CCNC-213ENST00000523541 S100PP25815 95 aa10.89□□□□□ -0.67
CCNC-213ENST00000523541 STPG4Q8N801 248 aa10.89□□□□□ -0.67
CCNC-213ENST00000523541 CAMK2N2Q96S95 79 aa10.89□□□□□ -0.67
CCNC-213ENST00000523541 OPRPNQ99935 248 aaPredicted RBP10.89□□□□□ -0.67
CCNC-213ENST00000523541 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
CCNC-213ENST00000523541 COX19Q49B96 90 aa10.88□□□□□ -0.67
CCNC-213ENST00000523541 TGIF2-C20orf24A0A0A6YYL0 155 aa10.87□□□□□ -0.67
CCNC-213ENST00000523541 HNRNPA3P51991 378 aaKnown RBP10.87□□□□□ -0.67
CCNC-213ENST00000523541 C2orf66Q6UXQ4 117 aa10.87□□□□□ -0.67
CCNC-213ENST00000523541 Q6ZN92 141 aa10.87□□□□□ -0.67
CCNC-213ENST00000523541 TEX43Q6ZNM6 134 aa10.87□□□□□ -0.67
CCNC-213ENST00000523541 Q6ZRU5 148 aa10.87□□□□□ -0.67
CCNC-213ENST00000523541 LINC01561Q8N1V8 128 aa10.87□□□□□ -0.67
CCNC-213ENST00000523541 GNB1LQ9BYB4 327 aa10.87□□□□□ -0.67
CCNC-213ENST00000523541 LRP1Q07954 4544 aaKnown RBP10.87□□□□□ -0.67
CCNC-213ENST00000523541 FAT3Q8TDW7 4589 aa10.86□□□□□ -0.67
CCNC-213ENST00000523541 A0A087WZ39 114 aa10.86□□□□□ -0.67
CCNC-213ENST00000523541 LINC01549A6NIU2 74 aa10.86□□□□□ -0.67
CCNC-213ENST00000523541 PTTG1IPP53801 180 aa10.86□□□□□ -0.67
CCNC-213ENST00000523541 SPAG11BQ08648 103 aa10.86□□□□□ -0.67
CCNC-213ENST00000523541 PAPPA-AS1Q5QFB9 102 aa10.86□□□□□ -0.67
CCNC-213ENST00000523541 C10orf91Q5T1B1 145 aa10.86□□□□□ -0.67
CCNC-213ENST00000523541 C2orf88Q9BSF0 95 aa10.86□□□□□ -0.67
CCNC-213ENST00000523541 COMMD7Q86VX2 200 aa10.85□□□□□ -0.67
CCNC-213ENST00000523541 VCX2Q9H322 139 aa10.85□□□□□ -0.67
CCNC-213ENST00000523541 MRPL35Q9NZE8 188 aaKnown RBP10.85□□□□□ -0.67
CCNC-213ENST00000523541 LINC00242Q5T6M2 205 aa10.84□□□□□ -0.67
CCNC-213ENST00000523541 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
CCNC-213ENST00000523541 AMELXQ99217 191 aa10.84□□□□□ -0.67
CCNC-213ENST00000523541 IGIPA6NJ69 53 aa10.83□□□□□ -0.68
CCNC-213ENST00000523541 UBE2D1P51668 147 aa10.83□□□□□ -0.68
CCNC-213ENST00000523541 RHEBQ15382 184 aa10.83□□□□□ -0.68
CCNC-213ENST00000523541 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
CCNC-213ENST00000523541 CARHSP1Q9Y2V2 147 aaKnown RBP10.83□□□□□ -0.68
CCNC-213ENST00000523541 NDUFA1O15239 70 aa10.82□□□□□ -0.68
CCNC-213ENST00000523541 MT-ND6P03923 174 aa10.82□□□□□ -0.68
CCNC-213ENST00000523541 SEC11AP67812 179 aa10.82□□□□□ -0.68
CCNC-213ENST00000523541 GAGE2BQ13066 116 aa10.82□□□□□ -0.68
CCNC-213ENST00000523541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.81□□□□□ -0.68
CCNC-213ENST00000523541 SERTAD4-AS1Q5TG53 156 aa10.81□□□□□ -0.68
CCNC-213ENST00000523541 TIMM17AQ99595 171 aa10.81□□□□□ -0.68
CCNC-213ENST00000523541 TLX1NBP0CAT3 122 aa10.8□□□□□ -0.68
CCNC-213ENST00000523541 TOMM6Q96B49 74 aa10.8□□□□□ -0.68
CCNC-213ENST00000523541 LINC01546A6NGU7 62 aa10.79□□□□□ -0.68
CCNC-213ENST00000523541 KIAA1644Q3SXP7 199 aa10.79□□□□□ -0.68
CCNC-213ENST00000523541 ERASQ7Z444 233 aa10.79□□□□□ -0.68
CCNC-213ENST00000523541 RPL18AQ02543 176 aaKnown RBP10.78□□□□□ -0.68
CCNC-213ENST00000523541 KIAA0087Q14695 138 aa10.78□□□□□ -0.68
CCNC-213ENST00000523541 LINC00173Q6ZV60 143 aa10.78□□□□□ -0.68
CCNC-213ENST00000523541 ALKBH7Q9BT30 221 aaPredicted RBP10.78□□□□□ -0.68
CCNC-213ENST00000523541 RPS10P5Q9NQ39 176 aa10.78□□□□□ -0.68
CCNC-213ENST00000523541 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
CCNC-213ENST00000523541 HERVK_113P63121 156 aa10.77□□□□□ -0.69
CCNC-213ENST00000523541 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.69
CCNC-213ENST00000523541 Q6ZRP5 223 aa10.77□□□□□ -0.69
CCNC-213ENST00000523541 FABP9Q0Z7S8 132 aa10.75□□□□□ -0.69
CCNC-213ENST00000523541 UNQ6190/PRO20217Q6UXQ8 127 aa10.75□□□□□ -0.69
CCNC-213ENST00000523541 SCGB3A1Q96QR1 104 aa10.75□□□□□ -0.69
CCNC-213ENST00000523541 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
CCNC-213ENST00000523541 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
CCNC-213ENST00000523541 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
CCNC-213ENST00000523541 C10orf25Q5T742 122 aa10.74□□□□□ -0.69
CCNC-213ENST00000523541 PACRGQ96M98 296 aaPredicted RBP10.74□□□□□ -0.69
CCNC-213ENST00000523541 MRPL18Q9H0U6 180 aaKnown RBP10.74□□□□□ -0.69
CCNC-213ENST00000523541 C6orf48Q9UBA6 75 aa10.74□□□□□ -0.69
CCNC-213ENST00000523541 PRSS2P07478 247 aa10.73□□□□□ -0.69
CCNC-213ENST00000523541 NDUFA5Q16718 116 aa10.73□□□□□ -0.69
CCNC-213ENST00000523541 SPINK6Q6UWN8 80 aa10.73□□□□□ -0.69
CCNC-213ENST00000523541 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
CCNC-213ENST00000523541 PLA2G2DQ9UNK4 145 aa10.73□□□□□ -0.69
CCNC-213ENST00000523541 SNAPINO95295 136 aa10.72□□□□□ -0.69
CCNC-213ENST00000523541 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
CCNC-213ENST00000523541 ZC2HC1BQ5TFG8 222 aa10.72□□□□□ -0.69
CCNC-213ENST00000523541 FA2HQ7L5A8 372 aa10.72□□□□□ -0.69
CCNC-213ENST00000523541 Q8IZM0 81 aa10.72□□□□□ -0.69
CCNC-213ENST00000523541 SVBPQ8N300 66 aa10.72□□□□□ -0.69
CCNC-213ENST00000523541 SMCO4Q9NRQ5 59 aa10.71□□□□□ -0.69
CCNC-213ENST00000523541 TINCRA0A1B0GVN0 87 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms