RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FXYD3Q14802 87 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 LINC00242Q5T6M2 205 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 HCP5Q6MZN7 132 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 CRIP3Q6Q6R5 217 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 PATE2Q6UY27 113 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 TMEM141Q96I45 108 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 FAM167A-AS1Q96KT0 104 aa5.4□□□□□ -1.54
HDAC3-216ENST00000523088 C3orf84H3BNL1 204 aa5.39□□□□□ -1.55
HDAC3-216ENST00000523088 UBALD1Q8TB05 177 aa5.39□□□□□ -1.55
HDAC3-216ENST00000523088 CHCHD10Q8WYQ3 142 aaPredicted RBP5.39□□□□□ -1.55
HDAC3-216ENST00000523088 RPP21Q9H633 154 aaKnown RBP5.39□□□□□ -1.55
HDAC3-216ENST00000523088 NOTCH1P46531 2555 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 IGKV1-27A0A075B6S5 117 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 A6NDX4 124 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 E7EUB6 86 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 TFF1P04155 84 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 ARL14EPLP0DKL9 152 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 LY6EQ16553 131 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 CLEC2BQ92478 149 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 ZNF702PQ9H963 129 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 DPM3Q9P2X0 92 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 MEGF8Q7Z7M0 2845 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 CMYA5Q8N3K9 4069 aa5.38□□□□□ -1.55
HDAC3-216ENST00000523088 CDK2AP2O75956 126 aa5.37□□□□□ -1.55
HDAC3-216ENST00000523088 PRSS1P07477 247 aa5.37□□□□□ -1.55
HDAC3-216ENST00000523088 ARHGAP5-AS1Q96IT6 56 aa5.37□□□□□ -1.55
HDAC3-216ENST00000523088 ZFAND3Q9H8U3 227 aa5.37□□□□□ -1.55
HDAC3-216ENST00000523088 A0A0J9YY99 117 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 PMS2P5A8MQ11 134 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 H3BSH0 61 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 K7EMI3 77 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 IGLV1-47P01700 117 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 PRSS2P07478 247 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 KRTAP10-3P60369 221 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 PRB3Q04118 309 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-216ENST00000523088 C18orf65Q6ZTR6 163 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 LINC00574Q9H8X3 128 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 ZNF355PQ9NSJ1 428 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 VWFP04275 2813 aa5.36□□□□□ -1.55
HDAC3-216ENST00000523088 NOTCH3Q9UM47 2321 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 IGKV1-12A0A0C4DH73 117 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 A0A0G2JRQ6 117 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 A0A1B0GUT8 65 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 F8VRH5 84 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 IGKV1D-12P01611 117 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 IGKV1-16P04430 117 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 KPRPQ5T749 579 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-216ENST00000523088 SOSTDC1Q6X4U4 206 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 ORMDL3Q8N138 153 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 Q8N6K4 173 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 NRACQ8N912 160 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 TTTY13Q9BZ97 58 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 NDUFA12Q9UI09 145 aa5.35□□□□□ -1.55
HDAC3-216ENST00000523088 ZNF706Q9Y5V0 76 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-216ENST00000523088 ZNF815PA8K554 130 aa5.34□□□□□ -1.55
HDAC3-216ENST00000523088 ZNF138P52744 262 aa5.34□□□□□ -1.55
HDAC3-216ENST00000523088 FAM229BQ4G0N7 80 aa5.34□□□□□ -1.55
HDAC3-216ENST00000523088 Q6ZRP5 223 aa5.34□□□□□ -1.55
HDAC3-216ENST00000523088 LIMD2Q9BT23 127 aa5.34□□□□□ -1.55
HDAC3-216ENST00000523088 IGHV3OR16-13A0A075B7E8 117 aa5.33□□□□□ -1.56
HDAC3-216ENST00000523088 C16orf90A8MZG2 172 aa5.33□□□□□ -1.56
HDAC3-216ENST00000523088 C17orf58Q2M2W7 97 aa5.33□□□□□ -1.56
HDAC3-216ENST00000523088 FAM53AQ6NSI3 398 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-216ENST00000523088 RMI2Q96E14 147 aa5.33□□□□□ -1.56
HDAC3-216ENST00000523088 TRAV22A0A0B4J277 110 aa5.32□□□□□ -1.56
HDAC3-216ENST00000523088 TRBV6-1A0A0K0K1D8 114 aa5.32□□□□□ -1.56
HDAC3-216ENST00000523088 CGB3P0DN86 165 aa5.32□□□□□ -1.56
HDAC3-216ENST00000523088 CGB7P0DN87 165 aa5.32□□□□□ -1.56
HDAC3-216ENST00000523088 RPL27AP46776 148 aaKnown RBP5.32□□□□□ -1.56
HDAC3-216ENST00000523088 SPANXN5Q5MJ07 72 aa5.32□□□□□ -1.56
HDAC3-216ENST00000523088 SFTA2Q6UW10 78 aa5.32□□□□□ -1.56
HDAC3-216ENST00000523088 Q6ZTC4 211 aa5.32□□□□□ -1.56
HDAC3-216ENST00000523088 ICOSQ9Y6W8 199 aa5.32□□□□□ -1.56
HDAC3-216ENST00000523088 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
HDAC3-216ENST00000523088 TGP01266 2768 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 A0A0J9YX75 114 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 C11orf86A6NJI1 115 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 ZNF137PP52743 207 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 Q1RN00 199 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 PIGYQ3MUY2 71 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 MIR17HGQ75NE6 70 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 WFDC9Q8NEX5 89 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 C8orf49Q96NF6 230 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 ZNF580Q9UK33 172 aa5.31□□□□□ -1.56
HDAC3-216ENST00000523088 HCG22E2RYF7 251 aa5.3□□□□□ -1.56
HDAC3-216ENST00000523088 DNAL4O96015 105 aa5.3□□□□□ -1.56
HDAC3-216ENST00000523088 ZNF575Q86XF7 245 aa5.3□□□□□ -1.56
HDAC3-216ENST00000523088 C5orf56Q8N8D9 126 aa5.3□□□□□ -1.56
HDAC3-216ENST00000523088 XAGE1AQ9HD64 81 aa5.3□□□□□ -1.56
HDAC3-216ENST00000523088 TIMM8BQ9Y5J9 83 aaPredicted RBP5.3□□□□□ -1.56
HDAC3-216ENST00000523088 IGHV1-3A0A0C4DH29 117 aa5.29□□□□□ -1.56
HDAC3-216ENST00000523088 SDHAF1A6NFY7 115 aa5.29□□□□□ -1.56
HDAC3-216ENST00000523088 ADARB2-AS1A8MUL3 147 aa5.29□□□□□ -1.56
HDAC3-216ENST00000523088 C9orf116Q5BN46 136 aaPredicted RBP5.29□□□□□ -1.56
HDAC3-216ENST00000523088 OBSCN-AS1Q96MR7 158 aa5.29□□□□□ -1.56
HDAC3-216ENST00000523088 TRBV7-4A0A0J9YYF1 115 aa5.28□□□□□ -1.56
HDAC3-216ENST00000523088 PPP1R17O96001 155 aa5.28□□□□□ -1.56
HDAC3-216ENST00000523088 IAPPP10997 89 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms