RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PYGO1Q9Y3Y4 419 aa10.71□□□□□ -0.69
SQLE-205ENST00000521232 IGHV3OR16-9A0A0B4J2B5 98 aa10.7□□□□□ -0.7
SQLE-205ENST00000521232 CAMK2N2Q96S95 79 aa10.7□□□□□ -0.7
SQLE-205ENST00000521232 LOC107984640A0A0U1RRK4 108 aa10.69□□□□□ -0.7
SQLE-205ENST00000521232 LOC389332A0A1B0GUA5 103 aa10.69□□□□□ -0.7
SQLE-205ENST00000521232 IFI27P40305 119 aaPredicted RBP10.69□□□□□ -0.7
SQLE-205ENST00000521232 IFITM2Q01629 132 aa10.69□□□□□ -0.7
SQLE-205ENST00000521232 UQCC3Q6UW78 93 aa10.69□□□□□ -0.7
SQLE-205ENST00000521232 IMMP2LQ96T52 175 aa10.69□□□□□ -0.7
SQLE-205ENST00000521232 MAP1LC3AQ9H492 121 aa10.69□□□□□ -0.7
SQLE-205ENST00000521232 IFITM10A6NMD0 228 aa10.68□□□□□ -0.7
SQLE-205ENST00000521232 PTTG1IPP53801 180 aa10.68□□□□□ -0.7
SQLE-205ENST00000521232 Q8N8P6 123 aa10.68□□□□□ -0.7
SQLE-205ENST00000521232 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
SQLE-205ENST00000521232 IGLV4-3A0A075B6K6 122 aa10.67□□□□□ -0.7
SQLE-205ENST00000521232 TMEM218A2RU14 115 aa10.67□□□□□ -0.7
SQLE-205ENST00000521232 ADCYAP1P18509 176 aa10.67□□□□□ -0.7
SQLE-205ENST00000521232 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
SQLE-205ENST00000521232 HMCN2Q8NDA2 5059 aa10.67□□□□□ -0.7
SQLE-205ENST00000521232 F8WDY8 70 aa10.66□□□□□ -0.7
SQLE-205ENST00000521232 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
SQLE-205ENST00000521232 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.65□□□□□ -0.7
SQLE-205ENST00000521232 K7EMI3 77 aa10.65□□□□□ -0.7
SQLE-205ENST00000521232 GAGE2BQ13066 116 aa10.65□□□□□ -0.7
SQLE-205ENST00000521232 SERTAD4-AS1Q5TG53 156 aa10.65□□□□□ -0.7
SQLE-205ENST00000521232 ORAOV1Q8WV07 137 aa10.65□□□□□ -0.7
SQLE-205ENST00000521232 TMEM141Q96I45 108 aa10.65□□□□□ -0.7
SQLE-205ENST00000521232 CTDSP1Q9GZU7 261 aa10.65□□□□□ -0.7
SQLE-205ENST00000521232 PRR3P79522 188 aaKnown RBP10.64□□□□□ -0.71
SQLE-205ENST00000521232 ORMDL2Q53FV1 153 aa10.64□□□□□ -0.71
SQLE-205ENST00000521232 LINC00242Q5T6M2 205 aa10.64□□□□□ -0.71
SQLE-205ENST00000521232 C2orf66Q6UXQ4 117 aa10.64□□□□□ -0.71
SQLE-205ENST00000521232 MRPL35Q9NZE8 188 aaKnown RBP10.64□□□□□ -0.71
SQLE-205ENST00000521232 CYSLTR1Q9Y271 337 aa10.64□□□□□ -0.71
SQLE-205ENST00000521232 TNXBP22105 4242 aa10.64□□□□□ -0.71
SQLE-205ENST00000521232 A0A087WZ39 114 aa10.63□□□□□ -0.71
SQLE-205ENST00000521232 TGIF2-C20orf24A0A0A6YYL0 155 aa10.63□□□□□ -0.71
SQLE-205ENST00000521232 SEC11CQ9BY50 192 aa10.63□□□□□ -0.71
SQLE-205ENST00000521232 TRAV9-1A0A075B6T8 112 aa10.62□□□□□ -0.71
SQLE-205ENST00000521232 A0A0J9YXV3 536 aa10.62□□□□□ -0.71
SQLE-205ENST00000521232 A0A1W2PNN7 141 aa10.62□□□□□ -0.71
SQLE-205ENST00000521232 NPSP0C0P6 89 aa10.62□□□□□ -0.71
SQLE-205ENST00000521232 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
SQLE-205ENST00000521232 NXT2Q9NPJ8 142 aaKnown RBP10.62□□□□□ -0.71
SQLE-205ENST00000521232 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
SQLE-205ENST00000521232 UBE2D1P51668 147 aa10.61□□□□□ -0.71
SQLE-205ENST00000521232 AMELXQ99217 191 aa10.61□□□□□ -0.71
SQLE-205ENST00000521232 IGIPA6NJ69 53 aa10.6□□□□□ -0.71
SQLE-205ENST00000521232 NDUFA1O15239 70 aa10.6□□□□□ -0.71
SQLE-205ENST00000521232 KIAA0087Q14695 138 aa10.6□□□□□ -0.71
SQLE-205ENST00000521232 C2orf88Q9BSF0 95 aa10.6□□□□□ -0.71
SQLE-205ENST00000521232 RPL18AQ02543 176 aaKnown RBP10.59□□□□□ -0.71
SQLE-205ENST00000521232 KIAA1644Q3SXP7 199 aa10.59□□□□□ -0.71
SQLE-205ENST00000521232 C9orf116Q5BN46 136 aaPredicted RBP10.59□□□□□ -0.71
SQLE-205ENST00000521232 C10orf25Q5T742 122 aa10.59□□□□□ -0.71
SQLE-205ENST00000521232 UNQ6190/PRO20217Q6UXQ8 127 aa10.59□□□□□ -0.71
SQLE-205ENST00000521232 Q6ZN92 141 aa10.59□□□□□ -0.71
SQLE-205ENST00000521232 Q6ZRP5 223 aa10.59□□□□□ -0.71
SQLE-205ENST00000521232 LINC00173Q6ZV60 143 aa10.59□□□□□ -0.71
SQLE-205ENST00000521232 LINC01561Q8N1V8 128 aa10.59□□□□□ -0.71
SQLE-205ENST00000521232 VCX2Q9H322 139 aa10.59□□□□□ -0.71
SQLE-205ENST00000521232 TLX1NBP0CAT3 122 aa10.58□□□□□ -0.72
SQLE-205ENST00000521232 G0S2P27469 103 aa10.58□□□□□ -0.72
SQLE-205ENST00000521232 ZC2HC1BQ5TFG8 222 aa10.58□□□□□ -0.72
SQLE-205ENST00000521232 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
SQLE-205ENST00000521232 FAM19A3Q7Z5A8 133 aa10.57□□□□□ -0.72
SQLE-205ENST00000521232 GNB1LQ9BYB4 327 aa10.57□□□□□ -0.72
SQLE-205ENST00000521232 C6orf48Q9UBA6 75 aa10.57□□□□□ -0.72
SQLE-205ENST00000521232 S100PP25815 95 aa10.56□□□□□ -0.72
SQLE-205ENST00000521232 C10orf91Q5T1B1 145 aa10.56□□□□□ -0.72
SQLE-205ENST00000521232 SPINK6Q6UWN8 80 aa10.56□□□□□ -0.72
SQLE-205ENST00000521232 COMMD7Q86VX2 200 aa10.56□□□□□ -0.72
SQLE-205ENST00000521232 TOMM6Q96B49 74 aa10.55□□□□□ -0.72
SQLE-205ENST00000521232 TIMM17AQ99595 171 aa10.55□□□□□ -0.72
SQLE-205ENST00000521232 PAPPA-AS1Q5QFB9 102 aa10.54□□□□□ -0.72
SQLE-205ENST00000521232 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
SQLE-205ENST00000521232 TRBV30A0A0K0K1B3 111 aa10.53□□□□□ -0.72
SQLE-205ENST00000521232 COX19Q49B96 90 aa10.53□□□□□ -0.72
SQLE-205ENST00000521232 ALKBH7Q9BT30 221 aaPredicted RBP10.53□□□□□ -0.72
SQLE-205ENST00000521232 LINC01546A6NGU7 62 aa10.52□□□□□ -0.73
SQLE-205ENST00000521232 SEC11AP67812 179 aa10.52□□□□□ -0.73
SQLE-205ENST00000521232 C2orf82Q6UX34 121 aa10.52□□□□□ -0.73
SQLE-205ENST00000521232 PHF5AQ7RTV0 110 aaKnown RBP10.52□□□□□ -0.73
SQLE-205ENST00000521232 ERASQ7Z444 233 aa10.52□□□□□ -0.73
SQLE-205ENST00000521232 CARHSP1Q9Y2V2 147 aaKnown RBP10.52□□□□□ -0.73
SQLE-205ENST00000521232 HERVK_113P63121 156 aa10.51□□□□□ -0.73
SQLE-205ENST00000521232 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
SQLE-205ENST00000521232 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
SQLE-205ENST00000521232 PSORS1C2Q9UIG4 136 aa10.51□□□□□ -0.73
SQLE-205ENST00000521232 RHEBQ15382 184 aa10.5□□□□□ -0.73
SQLE-205ENST00000521232 GAGE2EQ4V326 116 aa10.5□□□□□ -0.73
SQLE-205ENST00000521232 PACRGQ96M98 296 aaPredicted RBP10.5□□□□□ -0.73
SQLE-205ENST00000521232 SCGB3A1Q96QR1 104 aa10.5□□□□□ -0.73
SQLE-205ENST00000521232 GAGE2DQ9UEU5 116 aa10.5□□□□□ -0.73
SQLE-205ENST00000521232 PLA2G2DQ9UNK4 145 aa10.5□□□□□ -0.73
SQLE-205ENST00000521232 FAM168BA1KXE4 195 aa10.49□□□□□ -0.73
SQLE-205ENST00000521232 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
SQLE-205ENST00000521232 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
SQLE-205ENST00000521232 MT-ND6P03923 174 aa10.49□□□□□ -0.73
SQLE-205ENST00000521232 PRSS2P07478 247 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms