RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 Q6ZSA8 131 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 OR5A1Q8NGJ0 315 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 RPL36ALQ969Q0 106 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 URB1-AS1Q96HZ7 61 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 A0A1B0GUT8 65 aa6.1□□□□□ -1.43
CTNNA1-221ENST00000520339 LECT2O14960 151 aa6.1□□□□□ -1.43
CTNNA1-221ENST00000520339 RIGQ13278 110 aa6.1□□□□□ -1.43
CTNNA1-221ENST00000520339 TMEM136Q6ZRR5 245 aa6.1□□□□□ -1.43
CTNNA1-221ENST00000520339 BAALCQ8WXS3 180 aa6.1□□□□□ -1.43
CTNNA1-221ENST00000520339 GEMIN7Q9H840 131 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-221ENST00000520339 PHLDA3Q9Y5J5 127 aa6.1□□□□□ -1.43
CTNNA1-221ENST00000520339 IGLC6P0CF74 106 aa6.09□□□□□ -1.43
CTNNA1-221ENST00000520339 Q6ZN92 141 aa6.09□□□□□ -1.43
CTNNA1-221ENST00000520339 NRACQ8N912 160 aa6.09□□□□□ -1.43
CTNNA1-221ENST00000520339 DNAJC30Q96LL9 226 aa6.09□□□□□ -1.43
CTNNA1-221ENST00000520339 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
CTNNA1-221ENST00000520339 TRBV10-1A0A0K0K1A3 114 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 F2Z2F3 143 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 M0R381 172 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 APCSP02743 223 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 UBE2D3P61077 147 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 UBE2D2P62837 147 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 HSD52Q0P140 79 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 GAGE6Q13070 117 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 FAM74A4Q5TZK3 123 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 LYZL1Q6UWQ5 148 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 SPANXCQ9NY87 97 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 KLK12Q9UKR0 248 aa6.08□□□□□ -1.44
CTNNA1-221ENST00000520339 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 TRBV7-3A0A075B6L6 115 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 RPL36AP83881 106 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 SPATA45Q537H7 98 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 Q8N976 141 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 RMI2Q96E14 147 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 CHCHD7Q9BUK0 85 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 CNFNQ9BYD5 112 aa6.07□□□□□ -1.44
CTNNA1-221ENST00000520339 IGKV2D-24A0A075B6R9 120 aa6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 A6NDN8 102 aa6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 OR5AL1P0C617 328 aa6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 CACNG7P62955 275 aa6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 RPL24P83731 157 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 TWIST1Q15672 202 aa6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 LINC01620Q4KN68 170 aa6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 FA2HQ7L5A8 372 aa6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 ERG28Q9UKR5 140 aa6.06□□□□□ -1.44
CTNNA1-221ENST00000520339 A0A087WX48 190 aa6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 F8WDY8 70 aa6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 SNAI2O43623 268 aa6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 RPL32P62910 135 aaKnown RBP6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 SEC11AP67812 179 aa6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 Q0VG73 95 aa6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 BOD1L2Q8IYS8 172 aa6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 OR10AG1Q8NH19 301 aa6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 PMCHL2Q9BQD1 86 aa6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 SRRM2Q9UQ35 2752 aaKnown RBP6.05□□□□□ -1.44
CTNNA1-221ENST00000520339 TRBV6-8A0A0A6YYG3 113 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 MUC21A0A0G2JKD1 596 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 MUC21A0A140T8X8 626 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 hDV102S1A0JD36 115 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 TMEM262E9PQX1 116 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 KIAA1644Q3SXP7 199 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 SPANXN1Q5VSR9 72 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 ENHOQ6UWT2 76 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 SCXQ7RTU7 201 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 NEXN-AS1Q8NBZ9 246 aa6.04□□□□□ -1.44
CTNNA1-221ENST00000520339 K7EP34 96 aa6.03□□□□□ -1.44
CTNNA1-221ENST00000520339 NTF3P20783 257 aa6.03□□□□□ -1.44
CTNNA1-221ENST00000520339 PAPPA-AS1Q5QFB9 102 aa6.03□□□□□ -1.44
CTNNA1-221ENST00000520339 AMMECR1LQ6DCA0 310 aa6.03□□□□□ -1.44
CTNNA1-221ENST00000520339 CHAC1Q9BUX1 264 aa6.03□□□□□ -1.44
CTNNA1-221ENST00000520339 TMEM191AQ9H0A3 160 aa6.03□□□□□ -1.44
CTNNA1-221ENST00000520339 ST20Q9HBF5 79 aa6.03□□□□□ -1.44
CTNNA1-221ENST00000520339 KIF25-AS1Q9Y6Z4 181 aa6.03□□□□□ -1.44
CTNNA1-221ENST00000520339 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 AMTP48728 403 aa6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 HINT1P49773 126 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 KRTAP10-4P60372 401 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 SMAGPQ0VAQ4 97 aa6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 FAM104BQ5XKR9 115 aa6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 NTM-AS1Q6ZSK4 140 aa6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 BAGE3Q86Y29 109 aa6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 DEFB104AQ8WTQ1 72 aa6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 AP1S3Q96PC3 154 aa6.02□□□□□ -1.45
CTNNA1-221ENST00000520339 H3BRM9 83 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 ZNF56Q15929 161 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 C14orf177Q52M58 125 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 MPV17L2Q567V2 206 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 AMN1Q8IY45 258 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 ORMDL3Q8N138 153 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 PRR26Q8N8Z3 221 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 CIRBP-AS1Q8TBR5 109 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 C18orf32Q8TCD1 76 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 TMEM126AQ9H061 195 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 HSPB8Q9UJY1 196 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 CYSLTR1Q9Y271 337 aa6.01□□□□□ -1.45
CTNNA1-221ENST00000520339 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms