RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ZNF492Q9P255 531 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 HHLA3Q9XRX5 114 aa3.22□□□□□ -1.89
SDCBP-207ENST00000520168 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 TRAV8-4A0A0B4J246 113 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 FAM236DA0A1B0GTK5 79 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 A0A1B0GWB2 263 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 IFITM10A6NMD0 228 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 K7EQD1 137 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 SPINK4O60575 86 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 P01737 135 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 IGLC2P0DOY2 106 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 FAM236CP0DP71 79 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 IFITM1P13164 125 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 GFI1BQ5VTD9 330 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 SCGB1D4Q6XE38 83 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 ATP5L2Q7Z4Y8 100 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 COPS9Q8WXC6 57 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 RAB37Q96AX2 223 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 LINC00479Q96M42 142 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 SLC50A1Q9BRV3 221 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 GFRA4Q9GZZ7 299 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 RNASE7Q9H1E1 156 aaKnown RBP3.21□□□□□ -1.9
SDCBP-207ENST00000520168 DPH3P1Q9H4G8 78 aa3.21□□□□□ -1.9
SDCBP-207ENST00000520168 ZNF331Q9NQX6 463 aaPredicted RBP3.21□□□□□ -1.9
SDCBP-207ENST00000520168 TRAV8-3A0A0A6YYJ7 113 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 TRAV8-6A0A0B4J262 113 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 TRGV4A0A0C4DH28 118 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 C19orf71A6NCJ1 209 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 RHODO00212 210 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 HLA-DQA1P01909 254 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 APCSP02743 223 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 FOXA3P55318 350 aaPredicted RBP3.2□□□□□ -1.9
SDCBP-207ENST00000520168 Q0VG73 95 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 ANKRD29Q8N6D5 301 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 PRR26Q8N8Z3 221 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 Q8N976 141 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 TMEM75Q8N9X5 138 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 C11orf72Q8NBR9 251 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 RPP21Q9H633 154 aaKnown RBP3.2□□□□□ -1.9
SDCBP-207ENST00000520168 JPT2Q9H910 190 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 Q9HAA7 133 aa3.2□□□□□ -1.9
SDCBP-207ENST00000520168 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.19□□□□□ -1.9
SDCBP-207ENST00000520168 TRAV26-2A0A0B4J265 109 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 TRAV12-3A0A0B4J271 114 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 RBAKDNA6NC62 111 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 PRYO14603 147 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 CRISP2P16562 243 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 NDUFV3P56181 108 aaKnown RBP3.19□□□□□ -1.9
SDCBP-207ENST00000520168 Q6AWC8 147 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 TEX43Q6ZNM6 134 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 TMEM136Q6ZRR5 245 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 Q86TA4 180 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 LINC01561Q8N1V8 128 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 EXOC3-AS1Q8N2X6 119 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 ATP6V0E2Q8NHE4 81 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 RASL10AQ92737 203 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 RMI2Q96E14 147 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 FAT4Q6V0I7 4981 aa3.19□□□□□ -1.9
SDCBP-207ENST00000520168 LPAP08519 4548 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 HIGD1CA8MV81 97 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 F8W1H4 67 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 IGHV3-53P01767 116 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 LINC00694P0DN24 101 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 TMEM258P61165 79 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 HBBP68871 147 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 RIGQ13278 110 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 C14orf177Q52M58 125 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 AMMECR1LQ6DCA0 310 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 Q6ZN92 141 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 PRNTQ86SH4 94 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 BAGE3Q86Y29 109 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 STPG4Q8N801 248 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 MUC2Q02817 5179 aa3.18□□□□□ -1.9
SDCBP-207ENST00000520168 TRGV11A0A075B6L2 103 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 TRAV8-1A0A0A6YYK1 113 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 A0A1B0GUT8 65 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 A0A1B0GXF2 115 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 KLLNB2CW77 178 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 K7EP34 96 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 IGLC6P0CF74 106 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 FGF6P10767 208 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 SEC11AP67812 179 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 WFDC2Q14508 124 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 UFSP1Q6NVU6 142 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 HRCT1Q6UXD1 115 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 C9orf47Q6ZRZ4 202 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 LINC01600Q96MT4 127 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 PAM16Q9Y3D7 125 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 LENEPQ9Y5L5 61 aa3.17□□□□□ -1.9
SDCBP-207ENST00000520168 TRAV4A0A0B4J268 109 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 GRIFINA4D1Z8 144 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 F2Z2F3 143 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 H7C1H1 209 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 M0R3E3 92 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 SERF1AO75920 110 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 APOMO95445 188 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 PFN2P35080 140 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 CRIP1P50238 77 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 LELP1Q5T871 98 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 GTSF1Q8WW33 167 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms