RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
SREK1-207ENST00000520058 C5orf38Q86SI9 138 aa11.87□□□□□ -0.51
SREK1-207ENST00000520058 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
SREK1-207ENST00000520058 CARD19Q96LW7 228 aa11.86□□□□□ -0.51
SREK1-207ENST00000520058 SLPIP03973 132 aa11.85□□□□□ -0.51
SREK1-207ENST00000520058 SYCNQ0VAF6 134 aa11.85□□□□□ -0.51
SREK1-207ENST00000520058 OR10D4PQ8NGN7 298 aa11.85□□□□□ -0.51
SREK1-207ENST00000520058 TOMM6Q96B49 74 aa11.85□□□□□ -0.51
SREK1-207ENST00000520058 TIMM17AQ99595 171 aa11.85□□□□□ -0.51
SREK1-207ENST00000520058 SEC11AP67812 179 aa11.84□□□□□ -0.51
SREK1-207ENST00000520058 CIRBP-AS1Q8TBR5 109 aa11.84□□□□□ -0.51
SREK1-207ENST00000520058 FAM104AQ969W3 186 aa11.84□□□□□ -0.51
SREK1-207ENST00000520058 SCGB3A1Q96QR1 104 aa11.84□□□□□ -0.51
SREK1-207ENST00000520058 IGHV3OR16-9A0A0B4J2B5 98 aa11.83□□□□□ -0.52
SREK1-207ENST00000520058 IGIPA6NJ69 53 aa11.83□□□□□ -0.52
SREK1-207ENST00000520058 ERASQ7Z444 233 aa11.83□□□□□ -0.52
SREK1-207ENST00000520058 LINC00528Q8N1L1 170 aa11.83□□□□□ -0.52
SREK1-207ENST00000520058 CAMK2N2Q96S95 79 aa11.83□□□□□ -0.52
SREK1-207ENST00000520058 KRTAP4-5Q9BYR2 181 aa11.83□□□□□ -0.52
SREK1-207ENST00000520058 IGLV4-69A0A075B6H9 119 aa11.82□□□□□ -0.52
SREK1-207ENST00000520058 LINC01546A6NGU7 62 aa11.82□□□□□ -0.52
SREK1-207ENST00000520058 F8WDY8 70 aa11.82□□□□□ -0.52
SREK1-207ENST00000520058 RAB5BP61020 215 aa11.82□□□□□ -0.52
SREK1-207ENST00000520058 COX6A2Q02221 97 aa11.82□□□□□ -0.52
SREK1-207ENST00000520058 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
SREK1-207ENST00000520058 AMELXQ99217 191 aa11.82□□□□□ -0.52
SREK1-207ENST00000520058 LINC00474Q9P2X8 69 aa11.82□□□□□ -0.52
SREK1-207ENST00000520058 UBE2D1P51668 147 aa11.81□□□□□ -0.52
SREK1-207ENST00000520058 SPAG11BQ08648 103 aa11.81□□□□□ -0.52
SREK1-207ENST00000520058 LINC00242Q5T6M2 205 aa11.81□□□□□ -0.52
SREK1-207ENST00000520058 ORAOV1Q8WV07 137 aa11.81□□□□□ -0.52
SREK1-207ENST00000520058 LINC00526Q96FQ7 95 aa11.81□□□□□ -0.52
SREK1-207ENST00000520058 SLC7A5P1Q8MH63 180 aa11.8□□□□□ -0.52
SREK1-207ENST00000520058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.8□□□□□ -0.52
SREK1-207ENST00000520058 A0A087WZ39 114 aa11.79□□□□□ -0.52
SREK1-207ENST00000520058 HERVK_113P63121 156 aa11.79□□□□□ -0.52
SREK1-207ENST00000520058 KRTAP17-1Q9BYP8 105 aa11.79□□□□□ -0.52
SREK1-207ENST00000520058 LINC00614P0C842 121 aa11.78□□□□□ -0.52
SREK1-207ENST00000520058 INAFM2P0DMQ5 153 aa11.78□□□□□ -0.52
SREK1-207ENST00000520058 CIRBPQ14011 172 aaKnown RBP11.78□□□□□ -0.52
SREK1-207ENST00000520058 LINC01561Q8N1V8 128 aa11.78□□□□□ -0.52
SREK1-207ENST00000520058 C18orf32Q8TCD1 76 aa11.78□□□□□ -0.52
SREK1-207ENST00000520058 GEMIN7Q9H840 131 aaKnown RBP11.78□□□□□ -0.52
SREK1-207ENST00000520058 IGKV2-24A0A0C4DH68 120 aa11.77□□□□□ -0.53
SREK1-207ENST00000520058 NDUFA1O15239 70 aa11.77□□□□□ -0.53
SREK1-207ENST00000520058 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
SREK1-207ENST00000520058 DNAH8Q96JB1 4490 aa11.76□□□□□ -0.53
SREK1-207ENST00000520058 LOC107984640A0A0U1RRK4 108 aa11.76□□□□□ -0.53
SREK1-207ENST00000520058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.76□□□□□ -0.53
SREK1-207ENST00000520058 MAJINQ3KP22 176 aa11.76□□□□□ -0.53
SREK1-207ENST00000520058 SPACA4Q8TDM5 124 aa11.76□□□□□ -0.53
SREK1-207ENST00000520058 PACRGQ96M98 296 aaPredicted RBP11.76□□□□□ -0.53
SREK1-207ENST00000520058 PRSS2P07478 247 aa11.75□□□□□ -0.53
SREK1-207ENST00000520058 RNF151Q2KHN1 245 aa11.75□□□□□ -0.53
SREK1-207ENST00000520058 Q6ZRU5 148 aa11.75□□□□□ -0.53
SREK1-207ENST00000520058 FAM19A3Q7Z5A8 133 aa11.75□□□□□ -0.53
SREK1-207ENST00000520058 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
SREK1-207ENST00000520058 A0A087WYN8 130 aa11.74□□□□□ -0.53
SREK1-207ENST00000520058 CHTF8P0CG12 524 aa11.74□□□□□ -0.53
SREK1-207ENST00000520058 ZC2HC1BQ5TFG8 222 aa11.74□□□□□ -0.53
SREK1-207ENST00000520058 CBLN2Q8IUK8 224 aa11.74□□□□□ -0.53
SREK1-207ENST00000520058 PANO1I0J062 215 aa11.73□□□□□ -0.53
SREK1-207ENST00000520058 HBDP02042 147 aa11.73□□□□□ -0.53
SREK1-207ENST00000520058 PMVKQ15126 192 aa11.73□□□□□ -0.53
SREK1-207ENST00000520058 YPEL4Q96NS1 127 aa11.73□□□□□ -0.53
SREK1-207ENST00000520058 MRPL35Q9NZE8 188 aaKnown RBP11.73□□□□□ -0.53
SREK1-207ENST00000520058 A0A096LNI7 61 aa11.72□□□□□ -0.53
SREK1-207ENST00000520058 C7orf33Q8WU49 177 aa11.72□□□□□ -0.53
SREK1-207ENST00000520058 GAGE2BQ13066 116 aa11.71□□□□□ -0.53
SREK1-207ENST00000520058 STPG4Q8N801 248 aa11.71□□□□□ -0.53
SREK1-207ENST00000520058 PLAC8Q9NZF1 115 aa11.71□□□□□ -0.53
SREK1-207ENST00000520058 TINCRA0A1B0GVN0 87 aa11.7□□□□□ -0.54
SREK1-207ENST00000520058 ATP5LO75964 103 aa11.7□□□□□ -0.54
SREK1-207ENST00000520058 CKS1BP61024 79 aa11.7□□□□□ -0.54
SREK1-207ENST00000520058 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
SREK1-207ENST00000520058 RPL18AQ02543 176 aaKnown RBP11.7□□□□□ -0.54
SREK1-207ENST00000520058 CST9LQ9H4G1 147 aa11.7□□□□□ -0.54
SREK1-207ENST00000520058 A0A0J9YXV3 536 aa11.69□□□□□ -0.54
SREK1-207ENST00000520058 PTTG1IPP53801 180 aa11.69□□□□□ -0.54
SREK1-207ENST00000520058 NDUFA6P56556 154 aa11.69□□□□□ -0.54
SREK1-207ENST00000520058 C6orf226Q5I0X4 101 aa11.69□□□□□ -0.54
SREK1-207ENST00000520058 LINC00469Q8N7U9 141 aa11.69□□□□□ -0.54
SREK1-207ENST00000520058 CHCHD1Q96BP2 118 aaKnown RBP11.69□□□□□ -0.54
SREK1-207ENST00000520058 TOMM7Q9P0U1 55 aa11.69□□□□□ -0.54
SREK1-207ENST00000520058 CDKN2A-AS1Q9UH64 79 aa11.69□□□□□ -0.54
SREK1-207ENST00000520058 TRBV30A0A0K0K1B3 111 aa11.68□□□□□ -0.54
SREK1-207ENST00000520058 Q8IZM0 81 aa11.68□□□□□ -0.54
SREK1-207ENST00000520058 ABCA13Q86UQ4 5058 aa11.67□□□□□ -0.54
SREK1-207ENST00000520058 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
SREK1-207ENST00000520058 H3BRM9 83 aa11.67□□□□□ -0.54
SREK1-207ENST00000520058 BAGE3Q86Y29 109 aa11.67□□□□□ -0.54
SREK1-207ENST00000520058 URB1-AS1Q96HZ7 61 aa11.67□□□□□ -0.54
SREK1-207ENST00000520058 KIAA0087Q14695 138 aa11.66□□□□□ -0.54
SREK1-207ENST00000520058 UNQ6190/PRO20217Q6UXQ8 127 aa11.66□□□□□ -0.54
SREK1-207ENST00000520058 PMCHL1Q16048 86 aa11.65□□□□□ -0.54
SREK1-207ENST00000520058 FAT1Q14517 4588 aa11.65□□□□□ -0.54
SREK1-207ENST00000520058 A0A096LNJ9 63 aa11.64□□□□□ -0.55
SREK1-207ENST00000520058 HSBP1O75506 76 aa11.64□□□□□ -0.55
SREK1-207ENST00000520058 TRGC2P03986 189 aa11.64□□□□□ -0.55
SREK1-207ENST00000520058 TLX1NBP0CAT3 122 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms