RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 NBEAL2Q6ZNJ1 2754 aa5.99□□□□□ -1.45
CTNNA1-210ENST00000518825 CRLF1O75462 422 aa5.99□□□□□ -1.45
CTNNA1-210ENST00000518825 RPL13AP40429 203 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-210ENST00000518825 CSNK1G2-AS1Q8NCQ2 148 aa5.99□□□□□ -1.45
CTNNA1-210ENST00000518825 DGAT2L7PQ6IED9 249 aa5.98□□□□□ -1.45
CTNNA1-210ENST00000518825 TRAV4A0A0B4J268 109 aa5.98□□□□□ -1.45
CTNNA1-210ENST00000518825 LST1O00453 97 aa5.98□□□□□ -1.45
CTNNA1-210ENST00000518825 HERVK_113P63121 156 aa5.98□□□□□ -1.45
CTNNA1-210ENST00000518825 GCN1Q92616 2671 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-210ENST00000518825 TRBV10-1A0A0K0K1A3 114 aa5.98□□□□□ -1.45
CTNNA1-210ENST00000518825 LINC01006Q8NI28 216 aa5.98□□□□□ -1.45
CTNNA1-210ENST00000518825 IFITM1P13164 125 aa5.97□□□□□ -1.45
CTNNA1-210ENST00000518825 RPL36AP83881 106 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-210ENST00000518825 GAGE6Q13070 117 aa5.97□□□□□ -1.45
CTNNA1-210ENST00000518825 DAZ2Q13117 558 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-210ENST00000518825 DAZ4Q86SG3 579 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-210ENST00000518825 RPL36ALQ969Q0 106 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-210ENST00000518825 DAZ3Q9NR90 486 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-210ENST00000518825 FAM110AQ9BQ89 295 aa5.96□□□□□ -1.46
CTNNA1-210ENST00000518825 GAGE7O76087 117 aa5.96□□□□□ -1.46
CTNNA1-210ENST00000518825 GAGE12FP0CL80 117 aa5.96□□□□□ -1.46
CTNNA1-210ENST00000518825 GAGE12GP0CL81 117 aa5.96□□□□□ -1.46
CTNNA1-210ENST00000518825 GAGE12IP0CL82 117 aa5.96□□□□□ -1.46
CTNNA1-210ENST00000518825 C2orf82Q6UX34 121 aa5.96□□□□□ -1.46
CTNNA1-210ENST00000518825 RPL35AP18077 110 aaKnown RBP5.95□□□□□ -1.46
CTNNA1-210ENST00000518825 PPDPFQ9H3Y8 114 aa5.95□□□□□ -1.46
CTNNA1-210ENST00000518825 TRRAPQ9Y4A5 3859 aa5.95□□□□□ -1.46
CTNNA1-210ENST00000518825 IGLV1-51P01701 117 aa5.95□□□□□ -1.46
CTNNA1-210ENST00000518825 IGLV4-60A0A075B6I1 120 aa5.95□□□□□ -1.46
CTNNA1-210ENST00000518825 TMEM262E9PQX1 116 aa5.95□□□□□ -1.46
CTNNA1-210ENST00000518825 UBE2WQ96B02 151 aa5.95□□□□□ -1.46
CTNNA1-210ENST00000518825 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
CTNNA1-210ENST00000518825 NHLRC4P0CG21 123 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 MRPL23Q16540 153 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 PRIMA1Q86XR5 153 aa5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 OVOL2Q9BRP0 275 aa5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 UNC79Q9P2D8 2635 aa5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 H3BT86 120 aa5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 FHL2Q14192 279 aa5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 DEFB121Q5J5C9 76 aa5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 FAM218AQ96MZ4 157 aa5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 TENM1Q9UKZ4 2725 aa5.94□□□□□ -1.46
CTNNA1-210ENST00000518825 FN1P02751 2386 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-210ENST00000518825 COX6CP09669 75 aa5.93□□□□□ -1.46
CTNNA1-210ENST00000518825 CIRBPQ14011 172 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-210ENST00000518825 C16orf74Q96GX8 76 aa5.93□□□□□ -1.46
CTNNA1-210ENST00000518825 TMEM243Q9BU79 118 aa5.93□□□□□ -1.46
CTNNA1-210ENST00000518825 C16orf95Q9H693 158 aa5.93□□□□□ -1.46
CTNNA1-210ENST00000518825 HELZ2Q9BYK8 2649 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-210ENST00000518825 TRGV2A0A075B6R0 118 aa5.92□□□□□ -1.46
CTNNA1-210ENST00000518825 TRBV6-4A0A1B0GX49 114 aa5.92□□□□□ -1.46
CTNNA1-210ENST00000518825 IGKV2-28A0A075B6P5 120 aa5.92□□□□□ -1.46
CTNNA1-210ENST00000518825 IGKV2D-28P01615 120 aa5.92□□□□□ -1.46
CTNNA1-210ENST00000518825 RNASE1P07998 156 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-210ENST00000518825 KRTAP10-3P60369 221 aa5.92□□□□□ -1.46
CTNNA1-210ENST00000518825 TRAV8-4A0A0B4J246 113 aa5.92□□□□□ -1.46
CTNNA1-210ENST00000518825 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
CTNNA1-210ENST00000518825 COX7A2LO14548 114 aa5.91□□□□□ -1.46
CTNNA1-210ENST00000518825 IGHV3OR16-9A0A0B4J2B5 98 aa5.91□□□□□ -1.46
CTNNA1-210ENST00000518825 MEIG1Q5JSS6 88 aa5.91□□□□□ -1.46
CTNNA1-210ENST00000518825 TRBV6-8A0A0A6YYG3 113 aa5.91□□□□□ -1.46
CTNNA1-210ENST00000518825 LINC00337Q8N6G1 96 aa5.91□□□□□ -1.46
CTNNA1-210ENST00000518825 IGKV3OR2-268A0A0C4DH90 116 aa5.9□□□□□ -1.46
CTNNA1-210ENST00000518825 UBE2L6O14933 153 aa5.9□□□□□ -1.46
CTNNA1-210ENST00000518825 SPATA3Q8NHX4 192 aa5.9□□□□□ -1.46
CTNNA1-210ENST00000518825 C15orf53Q8NAA6 179 aa5.9□□□□□ -1.47
CTNNA1-210ENST00000518825 TRGV4A0A0C4DH28 118 aa5.9□□□□□ -1.47
CTNNA1-210ENST00000518825 TTC32Q5I0X7 151 aa5.9□□□□□ -1.47
CTNNA1-210ENST00000518825 TEX29Q8N6K0 151 aa5.9□□□□□ -1.47
CTNNA1-210ENST00000518825 COX7B2Q8TF08 81 aa5.9□□□□□ -1.47
CTNNA1-210ENST00000518825 CCDC179H3BU77 68 aa5.89□□□□□ -1.47
CTNNA1-210ENST00000518825 MIR7-3HGQ8N6C7 128 aa5.89□□□□□ -1.47
CTNNA1-210ENST00000518825 SNCGO76070 127 aa5.88□□□□□ -1.47
CTNNA1-210ENST00000518825 SMR3AQ99954 134 aa5.88□□□□□ -1.47
CTNNA1-210ENST00000518825 FASNP49327 2511 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-210ENST00000518825 ANK2Q01484 3957 aa5.88□□□□□ -1.47
CTNNA1-210ENST00000518825 SMCR5Q8TEV8 140 aa5.88□□□□□ -1.47
CTNNA1-210ENST00000518825 TOMM7Q9P0U1 55 aa5.88□□□□□ -1.47
CTNNA1-210ENST00000518825 FAM240AA0A1B0GVK7 77 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 NDUFV3P56181 108 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 GAGE2BQ13066 116 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 GAGE2EQ4V326 116 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 GAGE2DQ9UEU5 116 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 A0A087WZ39 114 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 DEFB130BP0DP73 79 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 DEFB130AP0DP74 79 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 CMC4P56277 68 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 C9orf129Q5T035 196 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 C5orf38Q86SI9 138 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 LINC00612Q8N6U2 182 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 RPL28P46779 137 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 CCL18P55774 89 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 C5orf47Q569G3 176 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 CHCHD5Q9BSY4 110 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 Q9HAA7 133 aa5.87□□□□□ -1.47
CTNNA1-210ENST00000518825 LINC00959A0A1B0GUT2 108 aa5.86□□□□□ -1.47
CTNNA1-210ENST00000518825 TRACP01848 142 aa5.86□□□□□ -1.47
CTNNA1-210ENST00000518825 HILS1P60008 231 aa5.86□□□□□ -1.47
CTNNA1-210ENST00000518825 Q6Q795 121 aa5.86□□□□□ -1.47
CTNNA1-210ENST00000518825 X6R8D5 127 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms