RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 Q6ZRN7 208 aaPredicted RBP3.86□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TRAV8-4A0A0B4J246 113 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 COLCA2A8K830 154 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 K7EMI3 77 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TRGC2P03986 189 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 S100A1P23297 94 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 G0S2P27469 103 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 FA2HQ7L5A8 372 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 ZNF664Q8N3J9 261 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 BAALCQ8WXS3 180 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 OPRPNQ99935 248 aaPredicted RBP3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CDC42SE2Q9NRR3 84 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 PRR34Q9NV39 138 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 UBE2D4Q9Y2X8 147 aa3.85□□□□□ -1.79
SCARNA6.1-201ENST00000516989 A0A087WTM6 91 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TRAV13-1A0A0B4J241 112 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 LECT2O14960 151 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CDK2AP2O75956 126 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 LINC00614P0C842 121 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RAB5BP61020 215 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 SS18Q15532 418 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 C2orf66Q6UXQ4 117 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 MRPL52Q86TS9 123 aaKnown RBP3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 C18orf32Q8TCD1 76 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 TIMM21Q9BVV7 248 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 SPANXA1Q9NS26 97 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CYSLTR1Q9Y271 337 aa3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 CSDC2Q9Y534 153 aaKnown RBP3.84□□□□□ -1.79
SCARNA6.1-201ENST00000516989 A0A0U1RRA0 63 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 LINC00959A0A1B0GUT2 108 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 IGKV2-30P06310 120 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 XCL1P47992 114 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HERV-K104P63124 156 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 Q6ZUT4 128 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 SPATA12Q7Z6I5 190 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 BAGE3Q86Y29 109 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 CHCHD10Q8WYQ3 142 aaPredicted RBP3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 SCGB3A1Q96QR1 104 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 VCX2Q9H322 139 aa3.83□□□□□ -1.8
SCARNA6.1-201ENST00000516989 DNAH6Q9C0G6 4158 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 DNAH10Q8IVF4 4471 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 LINC01546A6NGU7 62 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 C1orf196B1AJZ1 125 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 CCL25O15444 150 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 FUSP35637 526 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 MRPS36P82909 103 aaKnown RBP3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 WFDC2Q14508 124 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 Q6ZN92 141 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 TMEM141Q96I45 108 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 PYGO1Q9Y3Y4 419 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
SCARNA6.1-201ENST00000516989 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 IGLV4-3A0A075B6K6 122 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 IGIPA6NJ69 53 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 IFITM10A6NMD0 228 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 C16orf90A8MZG2 172 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 PMCHL1Q16048 86 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 C14orf177Q52M58 125 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 ZC2HC1BQ5TFG8 222 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 KRTAP26-1Q6PEX3 210 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 TEX43Q6ZNM6 134 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 Q8N814 137 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 TOMM6Q96B49 74 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 C2orf88Q9BSF0 95 aa3.81□□□□□ -1.8
SCARNA6.1-201ENST00000516989 LINC01549A6NIU2 74 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 F8WDY8 70 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HSBP1O75506 76 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HBDP02042 147 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 NDUFA6P56556 154 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 ERASQ7Z444 233 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 C5orf38Q86SI9 138 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 STPG4Q8N801 248 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 CHCHD1Q96BP2 118 aaKnown RBP3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 AMELXQ99217 191 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 TIMM17AQ99595 171 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 DNAH17Q9UFH2 4485 aa3.8□□□□□ -1.8
SCARNA6.1-201ENST00000516989 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.79□□□□□ -1.8
SCARNA6.1-201ENST00000516989 COX7A2LO14548 114 aa3.79□□□□□ -1.8
SCARNA6.1-201ENST00000516989 SERF1AO75920 110 aa3.79□□□□□ -1.8
SCARNA6.1-201ENST00000516989 PRSS1P07477 247 aa3.79□□□□□ -1.8
SCARNA6.1-201ENST00000516989 LINC00242Q5T6M2 205 aa3.79□□□□□ -1.8
SCARNA6.1-201ENST00000516989 FAM19A2Q8N3H0 131 aa3.79□□□□□ -1.8
SCARNA6.1-201ENST00000516989 A0A087WZ39 114 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 A0A096LNJ9 63 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 IGHV1-58A0A0C4DH39 117 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 A0A0J9YXV3 536 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 NUPR1O60356 82 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BKO60814 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 ATP5LO75964 103 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 APOMO95445 188 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BJP06899 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BOP23527 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BBP33778 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 UBE2D1P51668 147 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BDP58876 126 aa3.78□□□□□ -1.8
SCARNA6.1-201ENST00000516989 HIST1H2BCP62807 126 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms