RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 RBP4P02753 201 aa-3.94□□□□□ -3.04
RNU6-557P-201ENST00000516842 CCL8P80075 99 aa-3.94□□□□□ -3.04
RNU6-557P-201ENST00000516842 A2MP01023 1474 aa-3.94□□□□□ -3.04
RNU6-557P-201ENST00000516842 MBD5Q9P267 1494 aa-3.94□□□□□ -3.04
RNU6-557P-201ENST00000516842 YKT6O15498 198 aa-3.95□□□□□ -3.04
RNU6-557P-201ENST00000516842 LSM6P62312 80 aaKnown RBP-3.95□□□□□ -3.04
RNU6-557P-201ENST00000516842 SEC11AP67812 179 aa-3.95□□□□□ -3.04
RNU6-557P-201ENST00000516842 PSPHP78330 225 aa-3.95□□□□□ -3.04
RNU6-557P-201ENST00000516842 LSM2Q9Y333 95 aaKnown RBP-3.95□□□□□ -3.04
RNU6-557P-201ENST00000516842 MAP3K5Q99683 1374 aa-3.95□□□□□ -3.04
RNU6-557P-201ENST00000516842 A0A0G2JMZ2 1700 aa-3.95□□□□□ -3.04
RNU6-557P-201ENST00000516842 S100A9P06702 114 aaKnown RBP-3.96□□□□□ -3.04
RNU6-557P-201ENST00000516842 B2MP61769 119 aa-3.96□□□□□ -3.04
RNU6-557P-201ENST00000516842 Q6ZUT4 128 aa-3.96□□□□□ -3.04
RNU6-557P-201ENST00000516842 SIX6O95475 246 aa-3.97□□□□□ -3.04
RNU6-557P-201ENST00000516842 SFT2D2O95562 160 aa-3.97□□□□□ -3.04
RNU6-557P-201ENST00000516842 FAM167A-AS1Q96KT0 104 aa-3.97□□□□□ -3.04
RNU6-557P-201ENST00000516842 ARMC1Q9NVT9 282 aa-3.97□□□□□ -3.04
RNU6-557P-201ENST00000516842 TRAPPC2LQ9UL33 140 aa-3.97□□□□□ -3.04
RNU6-557P-201ENST00000516842 C1orf167Q5SNV9 1468 aa-3.98□□□□□ -3.05
RNU6-557P-201ENST00000516842 NWD2Q9ULI1 1742 aa-3.98□□□□□ -3.05
RNU6-557P-201ENST00000516842 ARHGEF10O15013 1369 aa-3.98□□□□□ -3.05
RNU6-557P-201ENST00000516842 CBLN1P23435 193 aa-3.98□□□□□ -3.05
RNU6-557P-201ENST00000516842 TTC9CQ8N5M4 171 aa-3.98□□□□□ -3.05
RNU6-557P-201ENST00000516842 DYDC1Q8WWB3 177 aa-3.98□□□□□ -3.05
RNU6-557P-201ENST00000516842 MIC13Q5XKP0 118 aa-3.99□□□□□ -3.05
RNU6-557P-201ENST00000516842 TMED4Q7Z7H5 227 aa-3.99□□□□□ -3.05
RNU6-557P-201ENST00000516842 TPT1P8Q9HAU6 139 aa-3.99□□□□□ -3.05
RNU6-557P-201ENST00000516842 LAMTOR2Q9Y2Q5 125 aa-3.99□□□□□ -3.05
RNU6-557P-201ENST00000516842 PRG4Q92954 1404 aaPredicted RBP-3.99□□□□□ -3.05
RNU6-557P-201ENST00000516842 MYO15AQ9UKN7 3530 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 XRN1Q8IZH2 1706 aaKnown RBP-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 SPAARA0A1B0GVQ0 90 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 E7EQ34 232 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 ATG12O94817 140 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 HLA-DRB4P13762 266 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 SEC11CQ9BY50 192 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 MED31Q9Y3C7 131 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 HLA-DRB4X5D2U9 266 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 MYH6P13533 1939 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 NLRP1Q9C000 1473 aa-4□□□□□ -3.05
RNU6-557P-201ENST00000516842 CLIP1P30622 1438 aa-4.01□□□□□ -3.05
RNU6-557P-201ENST00000516842 A0A1B0GU69 56 aa-4.01□□□□□ -3.05
RNU6-557P-201ENST00000516842 RPP14O95059 124 aaKnown RBP-4.01□□□□□ -3.05
RNU6-557P-201ENST00000516842 IGLC1P0CG04 106 aa-4.01□□□□□ -3.05
RNU6-557P-201ENST00000516842 AQP10Q96PS8 301 aa-4.01□□□□□ -3.05
RNU6-557P-201ENST00000516842 DOCK2Q92608 1830 aa-4.01□□□□□ -3.05
RNU6-557P-201ENST00000516842 DAPK1P53355 1430 aa-4.02□□□□□ -3.05
RNU6-557P-201ENST00000516842 PLEKHH2Q8IVE3 1493 aa-4.02□□□□□ -3.05
RNU6-557P-201ENST00000516842 HMGN4O00479 90 aa-4.02□□□□□ -3.05
RNU6-557P-201ENST00000516842 DEFB4AO15263 64 aa-4.02□□□□□ -3.05
RNU6-557P-201ENST00000516842 MAGOHP61326 146 aaKnown RBP-4.02□□□□□ -3.05
RNU6-557P-201ENST00000516842 UBE2D4Q9Y2X8 147 aa-4.02□□□□□ -3.05
RNU6-557P-201ENST00000516842 SNCAP37840 140 aa-4.03□□□□□ -3.05
RNU6-557P-201ENST00000516842 BANF2Q9H503 90 aa-4.03□□□□□ -3.05
RNU6-557P-201ENST00000516842 CRYBG3Q68DQ2 2970 aa-4.03□□□□□ -3.06
RNU6-557P-201ENST00000516842 HSBP1L1C9JCN9 74 aa-4.04□□□□□ -3.06
RNU6-557P-201ENST00000516842 TPM1P09493 284 aa-4.04□□□□□ -3.06
RNU6-557P-201ENST00000516842 FAM24BQ8N5W8 94 aa-4.04□□□□□ -3.06
RNU6-557P-201ENST00000516842 PRO1933Q9H354 126 aa-4.04□□□□□ -3.06
RNU6-557P-201ENST00000516842 FAIMQ9NVQ4 179 aa-4.04□□□□□ -3.06
RNU6-557P-201ENST00000516842 SMG6Q86US8 1419 aaKnown RBP-4.04□□□□□ -3.06
RNU6-557P-201ENST00000516842 SPEGQ15772 3267 aa-4.04□□□□□ -3.06
RNU6-557P-201ENST00000516842 QRICH2Q9H0J4 1663 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 TRAV13-2A0A0B4J235 113 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 FAM223BA6NKX1 122 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 M0R129 80 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 NDUFA3O95167 84 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 MT-ND4LP03901 98 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 RRAS2P62070 204 aaPredicted RBP-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 OR8I2Q8N0Y5 310 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 PARVGQ9HBI0 331 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 DYNLRB1Q9NP97 96 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 MAGI2Q86UL8 1455 aa-4.05□□□□□ -3.06
RNU6-557P-201ENST00000516842 NIPSNAP2O75323 286 aa-4.06□□□□□ -3.06
RNU6-557P-201ENST00000516842 IL5P05113 134 aa-4.06□□□□□ -3.06
RNU6-557P-201ENST00000516842 C5orf38Q86SI9 138 aa-4.06□□□□□ -3.06
RNU6-557P-201ENST00000516842 CALML5Q9NZT1 146 aa-4.06□□□□□ -3.06
RNU6-557P-201ENST00000516842 SCN11AQ9UI33 1791 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 CFAP54Q96N23 3096 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 SPTY2D1-AS1A0A0U1RR47 76 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 SMIM24O75264 130 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 POLR2HP52434 150 aaKnown RBP-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 SPA17Q15506 151 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 OR13C6PQ8NH95 151 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 COPZ2Q9P299 210 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 PPIP5K1Q6PFW1 1433 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 C4AP0C0L4 1744 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 C4BP0C0L5 1744 aa-4.07□□□□□ -3.06
RNU6-557P-201ENST00000516842 HIST1H1DP16402 221 aaKnown RBP-4.08□□□□□ -3.06
RNU6-557P-201ENST00000516842 ARAP2Q8WZ64 1704 aa-4.08□□□□□ -3.06
RNU6-557P-201ENST00000516842 TSLPQ969D9 159 aa-4.08□□□□□ -3.06
RNU6-557P-201ENST00000516842 MYH3P11055 1940 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 TET3O43151 1660 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 IFT140Q96RY7 1462 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 TMEM238C9JI98 176 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 SNCGO76070 127 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 PPP1R2P3Q6NXS1 205 aa-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 MRPL54Q6P161 138 aaKnown RBP-4.09□□□□□ -3.06
RNU6-557P-201ENST00000516842 FAM223AQ8IWN6 122 aa-4.09□□□□□ -3.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms