RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
DDX41-212ENST00000511040 CHTF8P0CG12 524 aa8.96□□□□□ -0.98
DDX41-212ENST00000511040 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.98
DDX41-212ENST00000511040 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
DDX41-212ENST00000511040 ALKBH7Q9BT30 221 aaPredicted RBP8.96□□□□□ -0.98
DDX41-212ENST00000511040 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.98
DDX41-212ENST00000511040 COX19Q49B96 90 aa8.95□□□□□ -0.98
DDX41-212ENST00000511040 PRSS3P2Q8NHM4 247 aa8.95□□□□□ -0.98
DDX41-212ENST00000511040 TMEM141Q96I45 108 aa8.95□□□□□ -0.98
DDX41-212ENST00000511040 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
DDX41-212ENST00000511040 MT-ND6P03923 174 aa8.94□□□□□ -0.98
DDX41-212ENST00000511040 COX6A2Q02221 97 aa8.94□□□□□ -0.98
DDX41-212ENST00000511040 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
DDX41-212ENST00000511040 IGIPA6NJ69 53 aa8.93□□□□□ -0.98
DDX41-212ENST00000511040 K7EMI3 77 aa8.93□□□□□ -0.98
DDX41-212ENST00000511040 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
DDX41-212ENST00000511040 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
DDX41-212ENST00000511040 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
DDX41-212ENST00000511040 CARD19Q96LW7 228 aa8.93□□□□□ -0.98
DDX41-212ENST00000511040 TRAPPC1Q9Y5R8 145 aa8.93□□□□□ -0.98
DDX41-212ENST00000511040 IGHV3OR16-9A0A0B4J2B5 98 aa8.92□□□□□ -0.98
DDX41-212ENST00000511040 LINC00173Q6ZV60 143 aa8.92□□□□□ -0.98
DDX41-212ENST00000511040 VCX2Q9H322 139 aa8.92□□□□□ -0.98
DDX41-212ENST00000511040 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
DDX41-212ENST00000511040 APOMO95445 188 aa8.91□□□□□ -0.98
DDX41-212ENST00000511040 SPAG11BQ08648 103 aa8.91□□□□□ -0.98
DDX41-212ENST00000511040 SYCNQ0VAF6 134 aa8.91□□□□□ -0.98
DDX41-212ENST00000511040 LINC00242Q5T6M2 205 aa8.91□□□□□ -0.98
DDX41-212ENST00000511040 Q6ZN92 141 aa8.91□□□□□ -0.98
DDX41-212ENST00000511040 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
DDX41-212ENST00000511040 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
DDX41-212ENST00000511040 UBE2D1P51668 147 aa8.9□□□□□ -0.98
DDX41-212ENST00000511040 Q6ZRU5 148 aa8.9□□□□□ -0.98
DDX41-212ENST00000511040 FA2HQ7L5A8 372 aa8.9□□□□□ -0.98
DDX41-212ENST00000511040 SPACA4Q8TDM5 124 aa8.9□□□□□ -0.98
DDX41-212ENST00000511040 ORAOV1Q8WV07 137 aa8.9□□□□□ -0.98
DDX41-212ENST00000511040 AMELXQ99217 191 aa8.9□□□□□ -0.98
DDX41-212ENST00000511040 PLA2G1BP04054 148 aaKnown RBP8.89□□□□□ -0.99
DDX41-212ENST00000511040 G0S2P27469 103 aa8.89□□□□□ -0.99
DDX41-212ENST00000511040 CIRBPQ14011 172 aaKnown RBP8.89□□□□□ -0.99
DDX41-212ENST00000511040 MAJINQ3KP22 176 aa8.89□□□□□ -0.99
DDX41-212ENST00000511040 SCGB3A1Q96QR1 104 aa8.89□□□□□ -0.99
DDX41-212ENST00000511040 CAMK2N2Q96S95 79 aa8.89□□□□□ -0.99
DDX41-212ENST00000511040 A0A087WYN8 130 aa8.88□□□□□ -0.99
DDX41-212ENST00000511040 A0A096LNI7 61 aa8.88□□□□□ -0.99
DDX41-212ENST00000511040 LINC01546A6NGU7 62 aa8.88□□□□□ -0.99
DDX41-212ENST00000511040 A0A0J9YXV3 536 aa8.87□□□□□ -0.99
DDX41-212ENST00000511040 OR10D4PQ8NGN7 298 aa8.87□□□□□ -0.99
DDX41-212ENST00000511040 C18orf32Q8TCD1 76 aa8.87□□□□□ -0.99
DDX41-212ENST00000511040 C2orf48Q96LS8 159 aa8.87□□□□□ -0.99
DDX41-212ENST00000511040 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
DDX41-212ENST00000511040 UBR4Q5T4S7 5183 aa8.86□□□□□ -0.99
DDX41-212ENST00000511040 A0A087WZ39 114 aa8.86□□□□□ -0.99
DDX41-212ENST00000511040 TRGC2P03986 189 aa8.86□□□□□ -0.99
DDX41-212ENST00000511040 NPSP0C0P6 89 aa8.86□□□□□ -0.99
DDX41-212ENST00000511040 ERASQ7Z444 233 aa8.86□□□□□ -0.99
DDX41-212ENST00000511040 SRRM2Q9UQ35 2752 aaKnown RBP8.85□□□□□ -0.99
DDX41-212ENST00000511040 RPL37AP61513 92 aaKnown RBP8.85□□□□□ -0.99
DDX41-212ENST00000511040 GAGE2BQ13066 116 aa8.85□□□□□ -0.99
DDX41-212ENST00000511040 PMCHL1Q16048 86 aa8.85□□□□□ -0.99
DDX41-212ENST00000511040 PAPPA-AS1Q5QFB9 102 aa8.85□□□□□ -0.99
DDX41-212ENST00000511040 URB1-AS1Q96HZ7 61 aa8.85□□□□□ -0.99
DDX41-212ENST00000511040 KRTAP10-4P60372 401 aaPredicted RBP8.84□□□□□ -0.99
DDX41-212ENST00000511040 HERC1Q15751 4861 aa8.84□□□□□ -0.99
DDX41-212ENST00000511040 C10orf25Q5T742 122 aa8.84□□□□□ -0.99
DDX41-212ENST00000511040 STPG4Q8N801 248 aa8.84□□□□□ -0.99
DDX41-212ENST00000511040 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
DDX41-212ENST00000511040 LOC107984640A0A0U1RRK4 108 aa8.83□□□□□ -1
DDX41-212ENST00000511040 LINC00614P0C842 121 aa8.83□□□□□ -1
DDX41-212ENST00000511040 UNQ6190/PRO20217Q6UXQ8 127 aa8.83□□□□□ -1
DDX41-212ENST00000511040 GEMIN7Q9H840 131 aaKnown RBP8.83□□□□□ -1
DDX41-212ENST00000511040 PKIGQ9Y2B9 76 aa8.83□□□□□ -1
DDX41-212ENST00000511040 A0A096LNJ9 63 aa8.82□□□□□ -1
DDX41-212ENST00000511040 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.82□□□□□ -1
DDX41-212ENST00000511040 NDUFA1O15239 70 aa8.82□□□□□ -1
DDX41-212ENST00000511040 PTTG1IPP53801 180 aa8.82□□□□□ -1
DDX41-212ENST00000511040 RPL18AQ02543 176 aaKnown RBP8.82□□□□□ -1
DDX41-212ENST00000511040 KIAA0087Q14695 138 aa8.82□□□□□ -1
DDX41-212ENST00000511040 FAM19A3Q7Z5A8 133 aa8.82□□□□□ -1
DDX41-212ENST00000511040 CST9LQ9H4G1 147 aa8.82□□□□□ -1
DDX41-212ENST00000511040 CDKN2A-AS1Q9UH64 79 aa8.82□□□□□ -1
DDX41-212ENST00000511040 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
DDX41-212ENST00000511040 HERVK_113P63121 156 aa8.81□□□□□ -1
DDX41-212ENST00000511040 C2orf82Q6UX34 121 aa8.81□□□□□ -1
DDX41-212ENST00000511040 MRPL35Q9NZE8 188 aaKnown RBP8.81□□□□□ -1
DDX41-212ENST00000511040 TOMM7Q9P0U1 55 aa8.81□□□□□ -1
DDX41-212ENST00000511040 LINC00474Q9P2X8 69 aa8.81□□□□□ -1
DDX41-212ENST00000511040 C6orf48Q9UBA6 75 aa8.81□□□□□ -1
DDX41-212ENST00000511040 LINC01549A6NIU2 74 aa8.8□□□□□ -1
DDX41-212ENST00000511040 F8WDY8 70 aa8.8□□□□□ -1
DDX41-212ENST00000511040 NDUFA6P56556 154 aa8.8□□□□□ -1
DDX41-212ENST00000511040 SEC11AP67812 179 aa8.8□□□□□ -1
DDX41-212ENST00000511040 PMVKQ15126 192 aa8.8□□□□□ -1
DDX41-212ENST00000511040 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
DDX41-212ENST00000511040 LINC00469Q8N7U9 141 aa8.8□□□□□ -1
DDX41-212ENST00000511040 HBDP02042 147 aa8.79□□□□□ -1
DDX41-212ENST00000511040 RAB5BP61020 215 aa8.79□□□□□ -1
DDX41-212ENST00000511040 RNF151Q2KHN1 245 aa8.79□□□□□ -1
DDX41-212ENST00000511040 PACRGQ96M98 296 aaPredicted RBP8.79□□□□□ -1
DDX41-212ENST00000511040 HIST1H2BKO60814 126 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms