RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
LIN54-209ENST00000510557 FAM19A3Q7Z5A8 133 aa13.7□□□□□ -0.22
LIN54-209ENST00000510557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.7□□□□□ -0.22
LIN54-209ENST00000510557 IL17DQ8TAD2 202 aa13.7□□□□□ -0.22
LIN54-209ENST00000510557 Q96MF0 132 aa13.7□□□□□ -0.22
LIN54-209ENST00000510557 Q9HAA7 133 aa13.69□□□□□ -0.22
LIN54-209ENST00000510557 TRGV1A0A0A0MS02 117 aa13.69□□□□□ -0.22
LIN54-209ENST00000510557 Q6JHZ5 121 aa13.69□□□□□ -0.22
LIN54-209ENST00000510557 C1orf158Q8N1D5 194 aa13.68□□□□□ -0.22
LIN54-209ENST00000510557 KIR2DL5BQ8NHK3 375 aa13.68□□□□□ -0.22
LIN54-209ENST00000510557 COX6A2Q02221 97 aa13.67□□□□□ -0.22
LIN54-209ENST00000510557 HIST2H2BCQ6DN03 193 aa13.67□□□□□ -0.22
LIN54-209ENST00000510557 HIST2H2BDQ6DRA6 164 aa13.67□□□□□ -0.22
LIN54-209ENST00000510557 CMC4P56277 68 aaPredicted RBP13.67□□□□□ -0.22
LIN54-209ENST00000510557 KRTAP10-9P60411 292 aa13.67□□□□□ -0.22
LIN54-209ENST00000510557 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
LIN54-209ENST00000510557 UPK3BQ9BT76 320 aa13.67□□□□□ -0.22
LIN54-209ENST00000510557 IGSF10Q6WRI0 2623 aa13.67□□□□□ -0.22
LIN54-209ENST00000510557 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
LIN54-209ENST00000510557 IGHV3OR16-12A0A075B7B8 117 aa13.66□□□□□ -0.22
LIN54-209ENST00000510557 K7EQD1 137 aa13.66□□□□□ -0.22
LIN54-209ENST00000510557 IGKV3D-7A0A0C4DH55 119 aa13.66□□□□□ -0.22
LIN54-209ENST00000510557 LINC00242Q5T6M2 205 aa13.66□□□□□ -0.22
LIN54-209ENST00000510557 CACNA1AO00555 2505 aa13.65□□□□□ -0.22
LIN54-209ENST00000510557 RPL28P46779 137 aaKnown RBP13.65□□□□□ -0.22
LIN54-209ENST00000510557 PIEZO1Q92508 2521 aa13.65□□□□□ -0.22
LIN54-209ENST00000510557 PF4P02776 101 aa13.65□□□□□ -0.22
LIN54-209ENST00000510557 USP9YO00507 2555 aaPredicted RBP13.64□□□□□ -0.23
LIN54-209ENST00000510557 TRAV13-2A0A0B4J235 113 aa13.64□□□□□ -0.23
LIN54-209ENST00000510557 PRB1P04280 392 aa13.64□□□□□ -0.23
LIN54-209ENST00000510557 SMIM1B2RUZ4 78 aa13.64□□□□□ -0.23
LIN54-209ENST00000510557 CCL24O00175 119 aa13.64□□□□□ -0.23
LIN54-209ENST00000510557 C14orf132Q9NPU4 83 aa13.63□□□□□ -0.23
LIN54-209ENST00000510557 CRPP02741 224 aa13.62□□□□□ -0.23
LIN54-209ENST00000510557 DSCR8Q96T75 97 aa13.62□□□□□ -0.23
LIN54-209ENST00000510557 CSMD2Q7Z408 3487 aa13.62□□□□□ -0.23
LIN54-209ENST00000510557 USP17L23D6RBM5 183 aa13.61□□□□□ -0.23
LIN54-209ENST00000510557 LINC00846Q9NV44 126 aa13.61□□□□□ -0.23
LIN54-209ENST00000510557 A0A087WVE0 104 aa13.6□□□□□ -0.23
LIN54-209ENST00000510557 OXTP01178 125 aa13.6□□□□□ -0.23
LIN54-209ENST00000510557 Q6ZTI0 123 aa13.6□□□□□ -0.23
LIN54-209ENST00000510557 CDC42SE2Q9NRR3 84 aa13.6□□□□□ -0.23
LIN54-209ENST00000510557 DNAJC9-AS1A6NH13 148 aa13.6□□□□□ -0.23
LIN54-209ENST00000510557 MYO18BQ8IUG5 2567 aa13.59□□□□□ -0.23
LIN54-209ENST00000510557 UBE2L6O14933 153 aa13.59□□□□□ -0.23
LIN54-209ENST00000510557 NTM-AS1Q6ZSK4 140 aa13.59□□□□□ -0.23
LIN54-209ENST00000510557 LINC01561Q8N1V8 128 aa13.59□□□□□ -0.23
LIN54-209ENST00000510557 UTP20O75691 2785 aaKnown RBP13.58□□□□□ -0.24
LIN54-209ENST00000510557 MXRA5Q9NR99 2828 aa13.58□□□□□ -0.24
LIN54-209ENST00000510557 A0A1W2PRX2 142 aa13.58□□□□□ -0.24
LIN54-209ENST00000510557 ZNF843Q8N446 348 aa13.58□□□□□ -0.24
LIN54-209ENST00000510557 OBSCN-AS1Q96MR7 158 aa13.58□□□□□ -0.24
LIN54-209ENST00000510557 FBN2P35556 2912 aa13.58□□□□□ -0.24
LIN54-209ENST00000510557 A0A087WYN8 130 aa13.57□□□□□ -0.24
LIN54-209ENST00000510557 C9orf129Q5T035 196 aaKnown RBP13.57□□□□□ -0.24
LIN54-209ENST00000510557 KRTAP1-3Q8IUG1 177 aa13.57□□□□□ -0.24
LIN54-209ENST00000510557 C16orf74Q96GX8 76 aa13.57□□□□□ -0.24
LIN54-209ENST00000510557 ACACBO00763 2458 aa13.57□□□□□ -0.24
LIN54-209ENST00000510557 ZANQ9Y493 2812 aa13.57□□□□□ -0.24
LIN54-209ENST00000510557 TMEM243Q9BU79 118 aa13.57□□□□□ -0.24
LIN54-209ENST00000510557 C4orf26Q17RF5 130 aa13.56□□□□□ -0.24
LIN54-209ENST00000510557 NOP10Q9NPE3 64 aaKnown RBP13.56□□□□□ -0.24
LIN54-209ENST00000510557 LINC00337Q8N6G1 96 aa13.55□□□□□ -0.24
LIN54-209ENST00000510557 BBC3Q96PG8 261 aaPredicted RBP13.55□□□□□ -0.24
LIN54-209ENST00000510557 H0YGX0 51 aa13.55□□□□□ -0.24
LIN54-209ENST00000510557 Q5XG85 94 aa13.55□□□□□ -0.24
LIN54-209ENST00000510557 C11orf44Q8N8P7 122 aa13.55□□□□□ -0.24
LIN54-209ENST00000510557 F5H768 121 aa13.54□□□□□ -0.24
LIN54-209ENST00000510557 TRBV6-4A0A1B0GX49 114 aa13.53□□□□□ -0.24
LIN54-209ENST00000510557 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
LIN54-209ENST00000510557 HRCT1Q6UXD1 115 aa13.53□□□□□ -0.24
LIN54-209ENST00000510557 SMIM11BQ8TCY0 68 aa13.53□□□□□ -0.24
LIN54-209ENST00000510557 POLQO75417 2590 aa13.53□□□□□ -0.24
LIN54-209ENST00000510557 SND1-IT1Q9HBX3 110 aa13.52□□□□□ -0.24
LIN54-209ENST00000510557 IGKV2-28A0A075B6P5 120 aa13.51□□□□□ -0.25
LIN54-209ENST00000510557 IGKV2D-28P01615 120 aa13.51□□□□□ -0.25
LIN54-209ENST00000510557 FAM208BQ5VWN6 2430 aa13.51□□□□□ -0.25
LIN54-209ENST00000510557 NDUFC2-KCTD14E9PQ53 114 aa13.51□□□□□ -0.25
LIN54-209ENST00000510557 MIR7-3HGQ8N6C7 128 aa13.5□□□□□ -0.25
LIN54-209ENST00000510557 NCR3O14931 201 aa13.5□□□□□ -0.25
LIN54-209ENST00000510557 LECT2O14960 151 aa13.49□□□□□ -0.25
LIN54-209ENST00000510557 NDUFC2O95298 119 aa13.49□□□□□ -0.25
LIN54-209ENST00000510557 GIG44P09565 113 aaPredicted RBP13.49□□□□□ -0.25
LIN54-209ENST00000510557 FHL2Q14192 279 aa13.49□□□□□ -0.25
LIN54-209ENST00000510557 C16orf95Q9H693 158 aa13.49□□□□□ -0.25
LIN54-209ENST00000510557 ESM1Q9NQ30 184 aa13.49□□□□□ -0.25
LIN54-209ENST00000510557 NAV2Q8IVL1 2488 aa13.49□□□□□ -0.25
LIN54-209ENST00000510557 TEX15Q9BXT5 2789 aa13.48□□□□□ -0.25
LIN54-209ENST00000510557 PLAC8L1A1L4L8 177 aa13.48□□□□□ -0.25
LIN54-209ENST00000510557 S100A7L2Q5SY68 101 aa13.48□□□□□ -0.25
LIN54-209ENST00000510557 TRGV4A0A0C4DH28 118 aa13.47□□□□□ -0.25
LIN54-209ENST00000510557 GHRHP01286 108 aa13.47□□□□□ -0.25
LIN54-209ENST00000510557 IGLV1-51P01701 117 aa13.47□□□□□ -0.25
LIN54-209ENST00000510557 WFDC11Q8NEX6 87 aa13.47□□□□□ -0.25
LIN54-209ENST00000510557 UBR5O95071 2799 aaPredicted RBP13.46□□□□□ -0.25
LIN54-209ENST00000510557 LINC01006Q8NI28 216 aa13.46□□□□□ -0.25
LIN54-209ENST00000510557 ZNF462Q96JM2 2506 aa13.46□□□□□ -0.26
LIN54-209ENST00000510557 CCKP06307 115 aa13.46□□□□□ -0.26
LIN54-209ENST00000510557 ATP5EP2Q5VTU8 51 aa13.46□□□□□ -0.26
LIN54-209ENST00000510557 COX7B2Q8TF08 81 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms