RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
RNF4-212ENST00000509258 CAMK2N2Q96S95 79 aa6.75□□□□□ -1.33
RNF4-212ENST00000509258 IGHV3OR16-9A0A0B4J2B5 98 aa6.74□□□□□ -1.33
RNF4-212ENST00000509258 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
RNF4-212ENST00000509258 ZC2HC1BQ5TFG8 222 aa6.74□□□□□ -1.33
RNF4-212ENST00000509258 C2orf48Q96LS8 159 aa6.74□□□□□ -1.33
RNF4-212ENST00000509258 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
RNF4-212ENST00000509258 IGLV4-3A0A075B6K6 122 aa6.72□□□□□ -1.33
RNF4-212ENST00000509258 F8W036 122 aa6.72□□□□□ -1.33
RNF4-212ENST00000509258 F8WDY8 70 aa6.72□□□□□ -1.33
RNF4-212ENST00000509258 MRPS36P82909 103 aaKnown RBP6.72□□□□□ -1.33
RNF4-212ENST00000509258 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
RNF4-212ENST00000509258 SRSF9Q13242 221 aaKnown RBP eCLIP6.72□□□□□ -1.33
RNF4-212ENST00000509258 TMEM136Q6ZRR5 245 aa6.72□□□□□ -1.33
RNF4-212ENST00000509258 KRTAP11-1Q8IUC1 163 aa6.72□□□□□ -1.33
RNF4-212ENST00000509258 ORMDL3Q8N138 153 aa6.72□□□□□ -1.33
RNF4-212ENST00000509258 PRELID3AQ96N28 172 aa6.72□□□□□ -1.33
RNF4-212ENST00000509258 SPANXA1Q9NS26 97 aa6.72□□□□□ -1.33
RNF4-212ENST00000509258 LOC389332A0A1B0GUA5 103 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 IFITM10A6NMD0 228 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 MT-ND6P03923 174 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 S100A8P05109 93 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 ADCYAP1P18509 176 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 KRTAP10-8P60410 259 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 LINC00173Q6ZV60 143 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 PHF5AQ7RTV0 110 aaKnown RBP6.71□□□□□ -1.34
RNF4-212ENST00000509258 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 ORAOV1Q8WV07 137 aa6.71□□□□□ -1.34
RNF4-212ENST00000509258 PPBPP02775 128 aa6.7□□□□□ -1.34
RNF4-212ENST00000509258 KIAA0087Q14695 138 aa6.7□□□□□ -1.34
RNF4-212ENST00000509258 RNF151Q2KHN1 245 aa6.7□□□□□ -1.34
RNF4-212ENST00000509258 C9orf116Q5BN46 136 aaPredicted RBP6.7□□□□□ -1.34
RNF4-212ENST00000509258 LINC00242Q5T6M2 205 aa6.7□□□□□ -1.34
RNF4-212ENST00000509258 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
RNF4-212ENST00000509258 OR10D4PQ8NGN7 298 aa6.7□□□□□ -1.34
RNF4-212ENST00000509258 IMMP2LQ96T52 175 aa6.7□□□□□ -1.34
RNF4-212ENST00000509258 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
RNF4-212ENST00000509258 PRSS47A8MTI9 375 aa6.69□□□□□ -1.34
RNF4-212ENST00000509258 IFITM2Q01629 132 aa6.69□□□□□ -1.34
RNF4-212ENST00000509258 PSORS1C2Q9UIG4 136 aa6.69□□□□□ -1.34
RNF4-212ENST00000509258 NDUFA1O15239 70 aa6.68□□□□□ -1.34
RNF4-212ENST00000509258 C1orf137Q5JT78 98 aa6.68□□□□□ -1.34
RNF4-212ENST00000509258 MRPL35Q9NZE8 188 aaKnown RBP6.68□□□□□ -1.34
RNF4-212ENST00000509258 PYGO1Q9Y3Y4 419 aa6.68□□□□□ -1.34
RNF4-212ENST00000509258 A0A087WZ39 114 aa6.67□□□□□ -1.34
RNF4-212ENST00000509258 UBE2D1P51668 147 aa6.67□□□□□ -1.34
RNF4-212ENST00000509258 C2orf82Q6UX34 121 aa6.67□□□□□ -1.34
RNF4-212ENST00000509258 Q8N8P6 123 aa6.67□□□□□ -1.34
RNF4-212ENST00000509258 DIRC1Q969H9 104 aa6.67□□□□□ -1.34
RNF4-212ENST00000509258 TGIF2-C20orf24A0A0A6YYL0 155 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 MT-ND4LP03901 98 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 RAB5AP20339 215 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 IFI27P40305 119 aaPredicted RBP6.66□□□□□ -1.34
RNF4-212ENST00000509258 PNRC1Q12796 327 aaPredicted RBP6.66□□□□□ -1.34
RNF4-212ENST00000509258 KIAA1644Q3SXP7 199 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 CLLU1Q5K131 121 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 C2orf66Q6UXQ4 117 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 ANAPC16Q96DE5 110 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 TMEM141Q96I45 108 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 AMELXQ99217 191 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 MAP1LC3AQ9H492 121 aa6.66□□□□□ -1.34
RNF4-212ENST00000509258 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
RNF4-212ENST00000509258 TLX1NBP0CAT3 122 aa6.65□□□□□ -1.34
RNF4-212ENST00000509258 GAGE2EQ4V326 116 aa6.64□□□□□ -1.35
RNF4-212ENST00000509258 FAM19A5Q7Z5A7 132 aaPredicted RBP6.64□□□□□ -1.35
RNF4-212ENST00000509258 GAGE2DQ9UEU5 116 aa6.64□□□□□ -1.35
RNF4-212ENST00000509258 LAMTOR2Q9Y2Q5 125 aa6.64□□□□□ -1.35
RNF4-212ENST00000509258 IGLV7-43P04211 117 aa6.63□□□□□ -1.35
RNF4-212ENST00000509258 LPAP08519 4548 aa6.63□□□□□ -1.35
RNF4-212ENST00000509258 RAB14P61106 215 aa6.63□□□□□ -1.35
RNF4-212ENST00000509258 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
RNF4-212ENST00000509258 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
RNF4-212ENST00000509258 CYSLTR1Q9Y271 337 aa6.63□□□□□ -1.35
RNF4-212ENST00000509258 UBE2BP63146 152 aa6.62□□□□□ -1.35
RNF4-212ENST00000509258 TEX43Q6ZNM6 134 aa6.62□□□□□ -1.35
RNF4-212ENST00000509258 C2orf88Q9BSF0 95 aa6.62□□□□□ -1.35
RNF4-212ENST00000509258 TRBV30A0A0K0K1B3 111 aa6.61□□□□□ -1.35
RNF4-212ENST00000509258 TMEM218A2RU14 115 aa6.61□□□□□ -1.35
RNF4-212ENST00000509258 Q6ZN92 141 aa6.61□□□□□ -1.35
RNF4-212ENST00000509258 FAM19A3Q7Z5A8 133 aa6.61□□□□□ -1.35
RNF4-212ENST00000509258 CTDSP1Q9GZU7 261 aa6.61□□□□□ -1.35
RNF4-212ENST00000509258 IGLV1-50A0A075B6I6 118 aa6.6□□□□□ -1.35
RNF4-212ENST00000509258 H0Y9J4 135 aa6.6□□□□□ -1.35
RNF4-212ENST00000509258 ORMDL2Q53FV1 153 aa6.6□□□□□ -1.35
RNF4-212ENST00000509258 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
RNF4-212ENST00000509258 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
RNF4-212ENST00000509258 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
RNF4-212ENST00000509258 CDKN2A-AS1Q9UH64 79 aa6.6□□□□□ -1.35
RNF4-212ENST00000509258 M0QXV9 152 aa6.59□□□□□ -1.35
RNF4-212ENST00000509258 PRSS2P07478 247 aa6.59□□□□□ -1.35
RNF4-212ENST00000509258 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
RNF4-212ENST00000509258 LINC00469Q8N7U9 141 aa6.59□□□□□ -1.35
RNF4-212ENST00000509258 TOMM6Q96B49 74 aa6.59□□□□□ -1.35
RNF4-212ENST00000509258 VCX2Q9H322 139 aa6.59□□□□□ -1.35
RNF4-212ENST00000509258 NXT2Q9NPJ8 142 aaKnown RBP6.59□□□□□ -1.35
RNF4-212ENST00000509258 TOMM7Q9P0U1 55 aa6.59□□□□□ -1.35
RNF4-212ENST00000509258 NDUFC2-KCTD14E9PQ53 114 aa6.58□□□□□ -1.36
RNF4-212ENST00000509258 PRR26Q8N8Z3 221 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms