RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 KLLNB2CW77 178 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 MYO7BQ6PIF6 2116 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 B4DSR2 109 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 KLK12Q9UKR0 248 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 TET2Q6N021 2002 aaPredicted RBP2.7□□□□□ -1.98
NEDD4-209ENST00000508871 Q8N8P6 123 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 FREM1Q5H8C1 2179 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 HIGD1CA8MV81 97 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 JMJD7-PLA2G4BH0Y9G9 81 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 MGPP08493 103 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 IGHV3-30-3P0DP02 117 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 TRBV7-3A0A075B6L6 115 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 A0A096LNT2 108 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 H3BRN7 92 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 ARL14EPLP0DKL9 152 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 HAMPP81172 84 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 PDE6HQ13956 83 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 Q8N814 137 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 IGKV1D-37A0A075B6S9 117 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 F8VRH5 84 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 WT1-ASQ06250 92 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 DYNAPQ8N1N2 210 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 DMAC1Q96GE9 116 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 BPESC1Q9GZL8 116 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 LYNX1G3V0Z9 82 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 NDUFB1O75438 58 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 LYNX1P0DP58 116 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 FXYD3Q14802 87 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 SPINK9Q5DT21 86 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 ZC2HC1BQ5TFG8 222 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 C5orf56Q8N8D9 126 aa2.69□□□□□ -1.98
NEDD4-209ENST00000508871 A0A1B0GVX0 72 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 A0A1W2PPR1 153 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 DEFB113Q30KQ7 82 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 SBSPONQ8IVN8 264 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 USMG5Q96IX5 58 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 Q9BRP9 147 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 UNC80Q8N2C7 3258 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 IGLV10-54A0A075B6I4 117 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 ARFGEF3Q5TH69 2177 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 NUPR2A6NF83 97 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 ATP5EP2Q5VTU8 51 aa2.68□□□□□ -1.98
NEDD4-209ENST00000508871 RANBP2P49792 3224 aaKnown RBP2.68□□□□□ -1.98
NEDD4-209ENST00000508871 MIFP14174 115 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 DEFB112Q30KQ8 113 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 GFRA4Q9GZZ7 299 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 ZNF407Q9C0G0 2248 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 MUC3AQ02505 3323 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-209ENST00000508871 FAM167A-AS1Q96KT0 104 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 SEC16AO15027 2179 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 A0A096LNJ9 63 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 TRBV30A0A0K0K1B3 111 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 K7EIM0 57 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 C14orf177Q52M58 125 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 Q8N2B8 174 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 DNAH14Q0VDD8 3507 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 OTOGLQ3ZCN5 2332 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 DNAH10OSP0CZ25 163 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 ACYP2P14621 99 aa2.67□□□□□ -1.98
NEDD4-209ENST00000508871 ELOF1P60002 83 aaKnown RBP2.67□□□□□ -1.98
NEDD4-209ENST00000508871 C9orf129Q5T035 196 aaKnown RBP2.66□□□□□ -1.98
NEDD4-209ENST00000508871 NACAE9PAV3 2078 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 A0A1B0GUT8 65 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 CYSRT1A8MQ03 144 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 E7EUB6 86 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 IGKV1OR2-108A0A075B7D4 117 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 J3QKU1 62 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 PRB2P02812 416 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-209ENST00000508871 IGLV2-18A0A075B6J9 118 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 IGKV3D-7A0A0C4DH55 119 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 COX7B2Q8TF08 81 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 EYSQ5T1H1 3165 aa2.66□□□□□ -1.98
NEDD4-209ENST00000508871 CEP290O15078 2479 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 SMIM27A0A1W2PRY6 76 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 NDUFA4O00483 81 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 ASB16-AS1Q495Z4 193 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 PATE2Q6UY27 113 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 FAM19A2Q8N3H0 131 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 RPP21Q9H633 154 aaKnown RBP2.65□□□□□ -1.98
NEDD4-209ENST00000508871 AHCTF1Q8WYP5 2266 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 HIGD1BQ9P298 99 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 WNK2Q9Y3S1 2297 aa2.65□□□□□ -1.98
NEDD4-209ENST00000508871 ADM2Q7Z4H4 148 aa2.65□□□□□ -1.99
NEDD4-209ENST00000508871 FAM168BA1KXE4 195 aa2.65□□□□□ -1.99
NEDD4-209ENST00000508871 KNTC1P50748 2209 aa2.65□□□□□ -1.99
NEDD4-209ENST00000508871 COX8AP10176 69 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 C10orf55Q5SWW7 151 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 C3orf79P0CE67 100 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 C16orf95Q9H693 158 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 TRIOO75962 3097 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 LRCOL1A6NCL2 159 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 KRTAP1-3Q8IUG1 177 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 LENEPQ9Y5L5 61 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 ABCA4P78363 2273 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 NUPR1O60356 82 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 IGKV1-17P01599 117 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 ODF3Q96PU9 254 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms