RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NACAE9PAV3 2078 aa7.89□□□□□ -1.15
SH3RF1-203ENST00000508685 DNHD1Q96M86 4753 aa7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 TRIAP1O43715 76 aa7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 XGP55808 180 aa7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 FAM110AQ9BQ89 295 aa7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 Q9UF83 564 aa7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 MT-ATP8P03928 68 aa7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 ADAMTSL4-AS1Q5T5F5 129 aa7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
SH3RF1-203ENST00000508685 DAZ2Q13117 558 aaKnown RBP7.87□□□□□ -1.15
SH3RF1-203ENST00000508685 DAZ4Q86SG3 579 aaKnown RBP7.87□□□□□ -1.15
SH3RF1-203ENST00000508685 DAZ3Q9NR90 486 aaKnown RBP7.87□□□□□ -1.15
SH3RF1-203ENST00000508685 IGLV5-39A0A0G2JS06 123 aa7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 RPL36AP83881 106 aaKnown RBP7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 RPL36ALQ969Q0 106 aaKnown RBP7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 CITED1Q99966 193 aa7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 C2orf82Q6UX34 121 aa7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 IL17DQ8TAD2 202 aa7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 NTN5Q8WTR8 489 aaPredicted RBP7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 TMEM101Q96IK0 257 aa7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 CDKN2A-AS1Q9UH64 79 aa7.86□□□□□ -1.15
SH3RF1-203ENST00000508685 PKD1L1Q8TDX9 2849 aa7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 TRGV1A0A0A0MS02 117 aa7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 LST1O00453 97 aa7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 MRPL23Q16540 153 aaKnown RBP7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 UBE2WQ96B02 151 aa7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 TRAV8-4A0A0B4J246 113 aa7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 HERV-K104P63124 156 aa7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 Q6Q795 121 aa7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 CSNK1G2-AS1Q8NCQ2 148 aa7.85□□□□□ -1.15
SH3RF1-203ENST00000508685 SNCGO76070 127 aa7.84□□□□□ -1.15
SH3RF1-203ENST00000508685 Q6ZTI0 123 aa7.84□□□□□ -1.15
SH3RF1-203ENST00000508685 TRAV4A0A0B4J268 109 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 IGHV3-38A0A0C4DH36 116 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 H7C423 109 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 DEFB121Q5J5C9 76 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 LINC00242Q5T6M2 205 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 ANK2Q01484 3957 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 K7EQD1 137 aa7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 NOP10Q9NPE3 64 aaKnown RBP7.83□□□□□ -1.16
SH3RF1-203ENST00000508685 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
SH3RF1-203ENST00000508685 GAGE2EQ4V326 116 aa7.82□□□□□ -1.16
SH3RF1-203ENST00000508685 C9orf66Q5T8R8 295 aa7.82□□□□□ -1.16
SH3RF1-203ENST00000508685 LINC00308Q8TCZ7 52 aa7.82□□□□□ -1.16
SH3RF1-203ENST00000508685 GAGE2DQ9UEU5 116 aa7.82□□□□□ -1.16
SH3RF1-203ENST00000508685 Q9H8V8 135 aa7.81□□□□□ -1.16
SH3RF1-203ENST00000508685 A8MZ25 164 aa7.81□□□□□ -1.16
SH3RF1-203ENST00000508685 TEX49A0A1B0GTD5 131 aa7.8□□□□□ -1.16
SH3RF1-203ENST00000508685 COX6A2Q02221 97 aa7.8□□□□□ -1.16
SH3RF1-203ENST00000508685 C3orf56Q8N813 242 aa7.8□□□□□ -1.16
SH3RF1-203ENST00000508685 C16orf74Q96GX8 76 aa7.8□□□□□ -1.16
SH3RF1-203ENST00000508685 CDC42SE2Q9NRR3 84 aa7.8□□□□□ -1.16
SH3RF1-203ENST00000508685 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
SH3RF1-203ENST00000508685 COX7A2LO14548 114 aa7.79□□□□□ -1.16
SH3RF1-203ENST00000508685 ACYP1P07311 99 aa7.79□□□□□ -1.16
SH3RF1-203ENST00000508685 ANAPC13Q9BS18 74 aa7.79□□□□□ -1.16
SH3RF1-203ENST00000508685 UBE2L6O14933 153 aa7.79□□□□□ -1.16
SH3RF1-203ENST00000508685 NPC2P61916 151 aa7.79□□□□□ -1.16
SH3RF1-203ENST00000508685 GAGE7O76087 117 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 GAGE12FP0CL80 117 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 GAGE12GP0CL81 117 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 GAGE12IP0CL82 117 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 MEIG1Q5JSS6 88 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 SHISA2Q6UWI4 295 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 ZNF625Q96I27 306 aaPredicted RBP7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 TMEM243Q9BU79 118 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 TRGV2A0A075B6R0 118 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 TTC32Q5I0X7 151 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 CLEC2BQ92478 149 aa7.78□□□□□ -1.16
SH3RF1-203ENST00000508685 TRAV26-1A0A087WT03 109 aa7.77□□□□□ -1.17
SH3RF1-203ENST00000508685 TRBV6-4A0A1B0GX49 114 aa7.77□□□□□ -1.17
SH3RF1-203ENST00000508685 TRACP01848 142 aa7.77□□□□□ -1.17
SH3RF1-203ENST00000508685 LINC00694P0DN24 101 aa7.77□□□□□ -1.17
SH3RF1-203ENST00000508685 NTM-AS1Q6ZSK4 140 aa7.77□□□□□ -1.17
SH3RF1-203ENST00000508685 TRAV13-1A0A0B4J241 112 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 F5H768 121 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 FAM222AQ5U5X8 452 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 C15orf53Q8NAA6 179 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 GAGE12JA6NER3 117 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 GAGE4Q13068 117 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 GAGE5Q13069 117 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 DAND5Q8N907 189 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 OVOL2Q9BRP0 275 aa7.76□□□□□ -1.17
SH3RF1-203ENST00000508685 WFDC9Q8NEX5 89 aa7.75□□□□□ -1.17
SH3RF1-203ENST00000508685 NDUFV3P56181 108 aaKnown RBP7.74□□□□□ -1.17
SH3RF1-203ENST00000508685 GAGE6Q13070 117 aa7.74□□□□□ -1.17
SH3RF1-203ENST00000508685 X6R8D5 127 aa7.74□□□□□ -1.17
SH3RF1-203ENST00000508685 CMYA5Q8N3K9 4069 aa7.74□□□□□ -1.17
SH3RF1-203ENST00000508685 DEFB135Q30KP9 77 aa7.74□□□□□ -1.17
SH3RF1-203ENST00000508685 LOC100131303A0A0U1RQF7 123 aa7.73□□□□□ -1.17
SH3RF1-203ENST00000508685 DEFB130BP0DP73 79 aa7.73□□□□□ -1.17
SH3RF1-203ENST00000508685 DEFB130AP0DP74 79 aa7.73□□□□□ -1.17
SH3RF1-203ENST00000508685 SOSTDC1Q6X4U4 206 aa7.73□□□□□ -1.17
SH3RF1-203ENST00000508685 COX7B2Q8TF08 81 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms