RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 RRN3P1Q2M238 152 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 Q56UQ5 140 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 LYRM7Q5U5X0 104 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 PATE2Q6UY27 113 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 C2orf91Q6ZV80 131 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 FAM167A-AS1Q96KT0 104 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 SMIM7Q9BQ49 75 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 SHANK2-AS3Q9BTD1 123 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 ZNF355PQ9NSJ1 428 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 SLC39A9Q9NUM3 307 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 TMEM14CQ9P0S9 112 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 S4R3C0 116 aa3.37□□□□□ -1.87
NIPBL-205ENST00000505998 FBN3Q75N90 2809 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 IGLV1-50A0A075B6I6 118 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 IGHV3-21A0A0B4J1V1 117 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 FAM236AA0A1B0GUQ0 79 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 FAM236BA0A1B0GV22 79 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 GRIFINA4D1Z8 144 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 OXTP01178 125 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 IL4P05112 153 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 CRYGAP11844 174 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 SYNJ2BPP57105 145 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 PDE6HQ13956 83 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 DEFB114Q30KQ6 69 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 PSMG4Q5JS54 123 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 TEN1Q86WV5 123 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 RPP25LQ8N5L8 163 aaKnown RBP3.36□□□□□ -1.87
NIPBL-205ENST00000505998 ANKRD29Q8N6D5 301 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 DCANP1Q8TF63 244 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 DPH3Q96FX2 82 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 ARL2-SNX15V9GYD0 113 aa3.36□□□□□ -1.87
NIPBL-205ENST00000505998 MEGF8Q7Z7M0 2845 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 IGLV4-60A0A075B6I1 120 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 TRBV7-7A0A0K0K1E9 115 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 SMKR1H3BMG3 65 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 P0DMU3 169 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 FAM231AP0DMU4 169 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 FAM231CP0DMU5 169 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 ZNF726P1Q15940 193 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 DEFB116Q30KQ4 102 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 MIC13Q5XKP0 118 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 EXOC3-AS1Q8N2X6 119 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 ZC2HC1AQ96GY0 325 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 METTL26Q96S19 204 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 RHPN1-AS1Q9BWJ2 59 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 GNB1LQ9BYB4 327 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 IMUPQ9GZP8 106 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 DNAH9Q9NYC9 4486 aa3.35□□□□□ -1.87
NIPBL-205ENST00000505998 CTXND1A0A1B0GTU2 59 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 TRACP01848 142 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 APCSP02743 223 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 NPPCP23582 126 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 CCL20P78556 96 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 CFAP126Q5VTH2 177 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 C10orf113Q5VZT2 155 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 LINC00322Q6ZN03 302 aaPredicted RBP3.34□□□□□ -1.87
NIPBL-205ENST00000505998 LINC00305Q7Z4B0 112 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
NIPBL-205ENST00000505998 TSKUQ8WUA8 353 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 CHAC1Q9BUX1 264 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 LAMTOR3Q9UHA4 124 aa3.34□□□□□ -1.87
NIPBL-205ENST00000505998 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
NIPBL-205ENST00000505998 TENM3Q9P273 2699 aa3.34□□□□□ -1.88
NIPBL-205ENST00000505998 STAB2Q8WWQ8 2551 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 IZUMO1RA6ND01 250 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 A8MWL6 223 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 NDUFC2-KCTD14E9PQ53 114 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 HLA-DQA1P01909 254 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 COX7CP15954 63 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 ZNF138P52744 262 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 FOXA3P55318 350 aaPredicted RBP3.33□□□□□ -1.88
NIPBL-205ENST00000505998 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 MIR17HGQ75NE6 70 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 LYPD1Q8N2G4 141 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 NUP35Q8NFH5 326 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 FXYD5Q96DB9 178 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 SLC50A1Q9BRV3 221 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 HIGD1BQ9P298 99 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 GNG13Q9P2W3 67 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 HUWE1Q7Z6Z7 4374 aaKnown RBP3.33□□□□□ -1.88
NIPBL-205ENST00000505998 DNAH7Q8WXX0 4024 aa3.33□□□□□ -1.88
NIPBL-205ENST00000505998 TRBV19A0A075B6N1 114 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 TRAV8-2A0A0B4J237 113 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 TRAV13-1A0A0B4J241 112 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 TRAV26-2A0A0B4J265 109 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 TRAV4A0A0B4J268 109 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 RBAKDNA6NC62 111 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 IGLL5B9A064 214 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 H7C1H1 209 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 COX7A2P2O60397 106 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 OR5AL1P0C617 328 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 HLA-DMBP28068 263 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 EBLN2Q6P2I7 272 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 COPS9Q8WXC6 57 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 CARD19Q96LW7 228 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 ODF3Q96PU9 254 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms