RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CHCHD10Q8WYQ3 142 aaPredicted RBP5.4□□□□□ -1.55
CDC42SE2-208ENST00000505065 ATP5LO75964 103 aa5.39□□□□□ -1.55
CDC42SE2-208ENST00000505065 PMVKQ15126 192 aa5.39□□□□□ -1.55
CDC42SE2-208ENST00000505065 OR10D4PQ8NGN7 298 aa5.39□□□□□ -1.55
CDC42SE2-208ENST00000505065 SLPIP03973 132 aa5.39□□□□□ -1.55
CDC42SE2-208ENST00000505065 HIST3H2BBQ8N257 126 aa5.39□□□□□ -1.55
CDC42SE2-208ENST00000505065 IGHV3-64A0A075B6Q5 118 aa5.39□□□□□ -1.55
CDC42SE2-208ENST00000505065 PAPPA-AS1Q5QFB9 102 aa5.39□□□□□ -1.55
CDC42SE2-208ENST00000505065 C1orf196B1AJZ1 125 aa5.39□□□□□ -1.55
CDC42SE2-208ENST00000505065 HERC2O95714 4834 aa5.38□□□□□ -1.55
CDC42SE2-208ENST00000505065 PRSS1P07477 247 aa5.38□□□□□ -1.55
CDC42SE2-208ENST00000505065 DGAT2L7PQ6IED9 249 aa5.38□□□□□ -1.55
CDC42SE2-208ENST00000505065 TEX43Q6ZNM6 134 aa5.38□□□□□ -1.55
CDC42SE2-208ENST00000505065 C2orf48Q96LS8 159 aa5.38□□□□□ -1.55
CDC42SE2-208ENST00000505065 PRSS29PA6NIE9 313 aa5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 LINC01545Q5VT33 79 aa5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 SCGB3A1Q96QR1 104 aa5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 TLX1NBP0CAT3 122 aa5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 PMCHL1Q16048 86 aa5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 DEFB104AQ8WTQ1 72 aa5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 M0R2N4 97 aa5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 RNASEKQ6P5S7 137 aaKnown RBP5.37□□□□□ -1.55
CDC42SE2-208ENST00000505065 HERVK_113P63121 156 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 SS18Q15532 418 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 AMMECR1LQ6DCA0 310 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 UBE2WQ96B02 151 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 PGPEP1Q9NXJ5 209 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 IGHV1-58A0A0C4DH39 117 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 GAGE12HA6NDE8 117 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 SMIM1B2RUZ4 78 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 TMEM262E9PQX1 116 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 SEC11AP67812 179 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 IFI27L1Q96BM0 104 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 C1orf43Q9BWL3 253 aa5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 ZNF22P17026 224 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-208ENST00000505065 C11orf86A6NJI1 115 aa5.35□□□□□ -1.55
CDC42SE2-208ENST00000505065 C14orf177Q52M58 125 aa5.35□□□□□ -1.55
CDC42SE2-208ENST00000505065 ZC2HC1BQ5TFG8 222 aa5.35□□□□□ -1.55
CDC42SE2-208ENST00000505065 CRPP02741 224 aa5.35□□□□□ -1.55
CDC42SE2-208ENST00000505065 C2orf88Q9BSF0 95 aa5.35□□□□□ -1.55
CDC42SE2-208ENST00000505065 USP17L23D6RBM5 183 aa5.35□□□□□ -1.55
CDC42SE2-208ENST00000505065 BAGE3Q86Y29 109 aa5.35□□□□□ -1.55
CDC42SE2-208ENST00000505065 Q8IZM0 81 aa5.35□□□□□ -1.55
CDC42SE2-208ENST00000505065 FAT3Q8TDW7 4589 aa5.34□□□□□ -1.55
CDC42SE2-208ENST00000505065 TMEM223A0PJW6 202 aa5.34□□□□□ -1.55
CDC42SE2-208ENST00000505065 F8VRH5 84 aa5.34□□□□□ -1.55
CDC42SE2-208ENST00000505065 FAM19A2Q8N3H0 131 aa5.34□□□□□ -1.55
CDC42SE2-208ENST00000505065 HSPB8Q9UJY1 196 aa5.34□□□□□ -1.55
CDC42SE2-208ENST00000505065 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
CDC42SE2-208ENST00000505065 VCX2Q9H322 139 aa5.34□□□□□ -1.55
CDC42SE2-208ENST00000505065 HIST1H2BLQ99880 126 aa5.34□□□□□ -1.55
CDC42SE2-208ENST00000505065 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 RNASE13Q5GAN3 156 aaKnown RBP5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 PET117Q6UWS5 81 aa5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 MRPL35Q9NZE8 188 aaKnown RBP5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 IGLV10-54A0A075B6I4 117 aa5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 LEPROTL1O95214 131 aa5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 PPDPFQ9H3Y8 114 aa5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 COX7A2LO14548 114 aa5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 HSBP1O75506 76 aa5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 Q6ZN92 141 aa5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 ZNF625Q96I27 306 aaPredicted RBP5.33□□□□□ -1.56
CDC42SE2-208ENST00000505065 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 SDIM1Q6ZPB5 146 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 CDKN2A-AS1Q9UH64 79 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 CLPSL2Q6UWE3 100 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 IGKV2D-24A0A075B6R9 120 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 LOC107984156A0A0G2JMH3 177 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 CDK2AP2O75956 126 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 ARL17AQ8IVW1 177 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 KRTAP17-1Q9BYP8 105 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 PLNP26678 52 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 CFAP161Q6P656 301 aa5.32□□□□□ -1.56
CDC42SE2-208ENST00000505065 C3orf79P0CE67 100 aa5.31□□□□□ -1.56
CDC42SE2-208ENST00000505065 LINC00518Q8N0U6 118 aa5.31□□□□□ -1.56
CDC42SE2-208ENST00000505065 Q9HAA7 133 aa5.31□□□□□ -1.56
CDC42SE2-208ENST00000505065 CHTOPQ9Y3Y2 248 aaKnown RBP5.31□□□□□ -1.56
CDC42SE2-208ENST00000505065 TRBV30A0A0K0K1B3 111 aa5.31□□□□□ -1.56
CDC42SE2-208ENST00000505065 KRTAP10-4P60372 401 aaPredicted RBP5.31□□□□□ -1.56
CDC42SE2-208ENST00000505065 XCL1P47992 114 aa5.3□□□□□ -1.56
CDC42SE2-208ENST00000505065 NDUFA6P56556 154 aa5.3□□□□□ -1.56
CDC42SE2-208ENST00000505065 KRTAP10-1P60331 282 aa5.3□□□□□ -1.56
CDC42SE2-208ENST00000505065 SPACA4Q8TDM5 124 aa5.3□□□□□ -1.56
CDC42SE2-208ENST00000505065 TRAV13-1A0A0B4J241 112 aa5.3□□□□□ -1.56
CDC42SE2-208ENST00000505065 CXCL5P42830 114 aa5.3□□□□□ -1.56
CDC42SE2-208ENST00000505065 CHAC1Q9BUX1 264 aa5.3□□□□□ -1.56
CDC42SE2-208ENST00000505065 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
CDC42SE2-208ENST00000505065 PLA2G2DQ9UNK4 145 aa5.29□□□□□ -1.56
CDC42SE2-208ENST00000505065 AKR1D1P51857 326 aa5.29□□□□□ -1.56
CDC42SE2-208ENST00000505065 XGP55808 180 aa5.28□□□□□ -1.56
CDC42SE2-208ENST00000505065 KRTAP7-1Q8IUC3 87 aa5.28□□□□□ -1.56
CDC42SE2-208ENST00000505065 MAP1LC3CQ9BXW4 147 aa5.28□□□□□ -1.56
CDC42SE2-208ENST00000505065 C6orf48Q9UBA6 75 aa5.28□□□□□ -1.56
CDC42SE2-208ENST00000505065 E9PLD3 99 aa5.28□□□□□ -1.56
CDC42SE2-208ENST00000505065 APOMO95445 188 aa5.28□□□□□ -1.56
CDC42SE2-208ENST00000505065 IGLV5-37A0A075B6J1 123 aa5.28□□□□□ -1.56
CDC42SE2-208ENST00000505065 LEPROTO15243 131 aa5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 DPM2O94777 84 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms