RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 PCP4L1A6NKN8 68 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 HNRNPA3P51991 378 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 MIAQ16674 131 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 SFTA2Q6UW10 78 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 CD164L2Q6UWJ8 174 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 WFDC10BQ8IUB3 73 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 CDKN2A-AS1Q9UH64 79 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 KLK12Q9UKR0 248 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 APLNQ9ULZ1 77 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 LINC00588Q9Y4M8 146 aa5.54□□□□□ -1.52
TOPBP1-202ENST00000503338 A0A087WZ39 114 aa5.53□□□□□ -1.52
TOPBP1-202ENST00000503338 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
TOPBP1-202ENST00000503338 MYMXA0A1B0GTQ4 84 aa5.53□□□□□ -1.52
TOPBP1-202ENST00000503338 J3QQQ9 107 aa5.53□□□□□ -1.52
TOPBP1-202ENST00000503338 IGHV3-30P01768 117 aa5.53□□□□□ -1.52
TOPBP1-202ENST00000503338 IGHV3-33P01772 117 aa5.53□□□□□ -1.52
TOPBP1-202ENST00000503338 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
TOPBP1-202ENST00000503338 IGHV3-30-5P0DP03 117 aa5.53□□□□□ -1.52
TOPBP1-202ENST00000503338 IGKV2D-26A0A0A0MRZ7 120 aa5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 TRAV8-3A0A0A6YYJ7 113 aa5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 APOMO95445 188 aa5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 COX6A2Q02221 97 aa5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 UBE2DNLQ8IWF7 75 aa5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 CHCHD10Q8WYQ3 142 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 RMI2Q96E14 147 aa5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
TOPBP1-202ENST00000503338 ZNF815PA8K554 130 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 SMIM1B2RUZ4 78 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 COX7A2LO14548 114 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 SPINK8P0C7L1 97 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 XCL1P47992 114 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 ZFAND6Q6FIF0 208 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 CLPSL2Q6UWE3 100 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 ENHOQ6UWT2 76 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 PCP2Q8IVA1 136 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 UBE2WQ96B02 151 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 WWC2-AS2Q96NR7 200 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 Q9H8V8 135 aa5.51□□□□□ -1.53
TOPBP1-202ENST00000503338 LINC00587B1AMM8 73 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 IBA57-AS1B1ANH7 110 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 MALP21145 153 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 CXCL5P42830 114 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 HERV-K104P63124 156 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 SCGB1D4Q6XE38 83 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 MUC7Q8TAX7 377 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 C1orf43Q9BWL3 253 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 NDUFA12Q9UI09 145 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 COX11Q9Y6N1 276 aa5.5□□□□□ -1.53
TOPBP1-202ENST00000503338 STAB2Q8WWQ8 2551 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 HUWE1Q7Z6Z7 4374 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 IGHV3-64A0A075B6Q5 118 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 M0R143 59 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 LCE2BO14633 110 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 NDUFA1O15239 70 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 PRSS2P07478 247 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 FOXI1Q12951 378 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 TAL2Q16559 108 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 TTC32Q5I0X7 151 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 C5orf38Q86SI9 138 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 Q8IZM0 81 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 Q8N3U1 123 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 COX7B2Q8TF08 81 aa5.49□□□□□ -1.53
TOPBP1-202ENST00000503338 DNHD1Q96M86 4753 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 IGLV10-54A0A075B6I4 117 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 GAGE12HA6NDE8 117 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 TMEM238C9JI98 176 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 GCSHP23434 173 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 CTAG1AP78358 180 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 HSD52Q0P140 79 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 CIRBPQ14011 172 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 CFAP161Q6P656 301 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 MAPKAPK5-AS1Q8N8E1 139 aa5.48□□□□□ -1.53
TOPBP1-202ENST00000503338 F8WDY8 70 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 C3orf84H3BNL1 204 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 TIMM17BO60830 172 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 TSPEAR-AS2P59090 65 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 C6orf226Q5I0X4 101 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 C2orf91Q6ZV80 131 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 Q6ZVH6 145 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 COPS9Q8WXC6 57 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 TM2D2Q9BX73 214 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 TTTY13Q9BZ97 58 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 SPANXB1Q9NS25 103 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 TOMM7Q9P0U1 55 aa5.47□□□□□ -1.53
TOPBP1-202ENST00000503338 IGKV2D-24A0A075B6R9 120 aa5.46□□□□□ -1.54
TOPBP1-202ENST00000503338 SRSF9Q13242 221 aaKnown RBP eCLIP5.46□□□□□ -1.54
TOPBP1-202ENST00000503338 LBHQ53QV2 105 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-202ENST00000503338 ORAOV1Q8WV07 137 aa5.46□□□□□ -1.54
TOPBP1-202ENST00000503338 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-202ENST00000503338 A0A0J9YXY3 114 aa5.45□□□□□ -1.54
TOPBP1-202ENST00000503338 CKS1BP61024 79 aa5.45□□□□□ -1.54
TOPBP1-202ENST00000503338 HIST1H4GQ99525 98 aa5.45□□□□□ -1.54
TOPBP1-202ENST00000503338 TP73-AS1Q9UF72 201 aa5.45□□□□□ -1.54
TOPBP1-202ENST00000503338 DNAH9Q9NYC9 4486 aa5.44□□□□□ -1.54
TOPBP1-202ENST00000503338 TMEM238LA0A1B0GVL6 79 aa5.44□□□□□ -1.54
TOPBP1-202ENST00000503338 IFITM1P13164 125 aa5.44□□□□□ -1.54
TOPBP1-202ENST00000503338 SPAG11BQ08648 103 aa5.44□□□□□ -1.54
TOPBP1-202ENST00000503338 MEIG1Q5JSS6 88 aa5.44□□□□□ -1.54
TOPBP1-202ENST00000503338 KRTAP26-1Q6PEX3 210 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms