RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 C2orf88Q9BSF0 95 aa16.29■□□□□ 0.2
LSM6-202ENST00000502781 FAM19A3Q7Z5A8 133 aa16.28■□□□□ 0.2
LSM6-202ENST00000502781 LINC01620Q4KN68 170 aa16.27■□□□□ 0.2
LSM6-202ENST00000502781 HIGD2BQ4VC39 106 aa16.27■□□□□ 0.2
LSM6-202ENST00000502781 C5orf38Q86SI9 138 aa16.27■□□□□ 0.2
LSM6-202ENST00000502781 C9orf163Q8N9P6 203 aa16.27■□□□□ 0.2
LSM6-202ENST00000502781 CHCHD1Q96BP2 118 aaKnown RBP16.27■□□□□ 0.2
LSM6-202ENST00000502781 HBDP02042 147 aa16.26■□□□□ 0.19
LSM6-202ENST00000502781 DNAH8Q96JB1 4490 aa16.25■□□□□ 0.19
LSM6-202ENST00000502781 MALP21145 153 aa16.25■□□□□ 0.19
LSM6-202ENST00000502781 COX6A2Q02221 97 aa16.25■□□□□ 0.19
LSM6-202ENST00000502781 PMCHL1Q16048 86 aa16.25■□□□□ 0.19
LSM6-202ENST00000502781 PDZD11Q5EBL8 140 aa16.25■□□□□ 0.19
LSM6-202ENST00000502781 HERC2O95714 4834 aa16.24■□□□□ 0.19
LSM6-202ENST00000502781 S100A1P23297 94 aa16.24■□□□□ 0.19
LSM6-202ENST00000502781 Q6ZSA8 131 aa16.24■□□□□ 0.19
LSM6-202ENST00000502781 HSPG2P98160 4391 aa16.23■□□□□ 0.19
LSM6-202ENST00000502781 ATP6V1G1O75348 118 aa16.23■□□□□ 0.19
LSM6-202ENST00000502781 A0A087WZ39 114 aa16.22■□□□□ 0.19
LSM6-202ENST00000502781 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.22■□□□□ 0.19
LSM6-202ENST00000502781 XGP55808 180 aa16.22■□□□□ 0.19
LSM6-202ENST00000502781 FAM30AQ9NZY2 134 aa16.22■□□□□ 0.19
LSM6-202ENST00000502781 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.21■□□□□ 0.19
LSM6-202ENST00000502781 BAGE3Q86Y29 109 aa16.21■□□□□ 0.19
LSM6-202ENST00000502781 CST9LQ9H4G1 147 aa16.21■□□□□ 0.19
LSM6-202ENST00000502781 APOMO95445 188 aa16.2■□□□□ 0.18
LSM6-202ENST00000502781 LINC00310P59036 64 aa16.2■□□□□ 0.18
LSM6-202ENST00000502781 IGHV3-64A0A075B6Q5 118 aa16.19■□□□□ 0.18
LSM6-202ENST00000502781 ZNF561-AS1K7EIQ3 104 aa16.19■□□□□ 0.18
LSM6-202ENST00000502781 SEC11AP67812 179 aa16.19■□□□□ 0.18
LSM6-202ENST00000502781 PMVKQ15126 192 aa16.19■□□□□ 0.18
LSM6-202ENST00000502781 OR10D4PQ8NGN7 298 aa16.19■□□□□ 0.18
LSM6-202ENST00000502781 LINC00526Q96FQ7 95 aa16.19■□□□□ 0.18
LSM6-202ENST00000502781 SDIM1Q6ZPB5 146 aa16.18■□□□□ 0.18
LSM6-202ENST00000502781 LINC01561Q8N1V8 128 aa16.18■□□□□ 0.18
LSM6-202ENST00000502781 HERVK_113P63121 156 aa16.17■□□□□ 0.18
LSM6-202ENST00000502781 IGLV4-69A0A075B6H9 119 aa16.16■□□□□ 0.18
LSM6-202ENST00000502781 A0A0J9YXV3 536 aa16.16■□□□□ 0.18
LSM6-202ENST00000502781 ATP5LO75964 103 aa16.16■□□□□ 0.18
LSM6-202ENST00000502781 HSBP1O75506 76 aa16.15■□□□□ 0.18
LSM6-202ENST00000502781 SERF1AO75920 110 aa16.15■□□□□ 0.18
LSM6-202ENST00000502781 C2orf48Q96LS8 159 aa16.15■□□□□ 0.18
LSM6-202ENST00000502781 TINCRA0A1B0GVN0 87 aa16.14■□□□□ 0.17
LSM6-202ENST00000502781 ORAOV1Q8WV07 137 aa16.14■□□□□ 0.17
LSM6-202ENST00000502781 SPAG11BQ08648 103 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 GEMIN7Q9H840 131 aaKnown RBP16.13■□□□□ 0.17
LSM6-202ENST00000502781 CDKN2A-AS1Q9UH64 79 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 IGLV5-45A0A087WSX0 123 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BKO60814 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BJP06899 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BOP23527 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BBP33778 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BDP58876 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BCP62807 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 SYCNQ0VAF6 134 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST2H2BEQ16778 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.13■□□□□ 0.17
LSM6-202ENST00000502781 FAM19A2Q8N3H0 131 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BHQ93079 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BNQ99877 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 HIST1H2BMQ99879 126 aa16.13■□□□□ 0.17
LSM6-202ENST00000502781 CARD19Q96LW7 228 aa16.12■□□□□ 0.17
LSM6-202ENST00000502781 NUPR1O60356 82 aa16.11■□□□□ 0.17
LSM6-202ENST00000502781 KIAA0087Q14695 138 aa16.11■□□□□ 0.17
LSM6-202ENST00000502781 KRTAP17-1Q9BYP8 105 aa16.11■□□□□ 0.17
LSM6-202ENST00000502781 F8WDY8 70 aa16.1■□□□□ 0.17
LSM6-202ENST00000502781 Q6ZRU5 148 aa16.1■□□□□ 0.17
LSM6-202ENST00000502781 IGLC3P0DOY3 106 aa16.09■□□□□ 0.17
LSM6-202ENST00000502781 HAMPP81172 84 aa16.09■□□□□ 0.17
LSM6-202ENST00000502781 CAMK2N2Q96S95 79 aa16.09■□□□□ 0.17
LSM6-202ENST00000502781 CHAC1Q9BUX1 264 aa16.09■□□□□ 0.17
LSM6-202ENST00000502781 CIRBPQ14011 172 aaKnown RBP16.08■□□□□ 0.16
LSM6-202ENST00000502781 LINC00469Q8N7U9 141 aa16.08■□□□□ 0.16
LSM6-202ENST00000502781 IFI27L1Q96BM0 104 aa16.08■□□□□ 0.16
LSM6-202ENST00000502781 PANO1I0J062 215 aa16.07■□□□□ 0.16
LSM6-202ENST00000502781 NDUFA6P56556 154 aa16.07■□□□□ 0.16
LSM6-202ENST00000502781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.07■□□□□ 0.16
LSM6-202ENST00000502781 SCXQ7RTU7 201 aa16.06■□□□□ 0.16
LSM6-202ENST00000502781 TRAV12-1A0A0B4J245 112 aa16.04■□□□□ 0.16
LSM6-202ENST00000502781 RNF151Q2KHN1 245 aa16.04■□□□□ 0.16
LSM6-202ENST00000502781 MRPL35Q9NZE8 188 aaKnown RBP16.04■□□□□ 0.16
LSM6-202ENST00000502781 SMIM1B2RUZ4 78 aa16.03■□□□□ 0.16
LSM6-202ENST00000502781 Q8N1X5 172 aa16.03■□□□□ 0.16
LSM6-202ENST00000502781 CIRBP-AS1Q8TBR5 109 aa16.03■□□□□ 0.16
LSM6-202ENST00000502781 NDUFA1O15239 70 aa16.02■□□□□ 0.16
LSM6-202ENST00000502781 LEPROTL1O95214 131 aa16.02■□□□□ 0.16
LSM6-202ENST00000502781 Q8IZM0 81 aa16.02■□□□□ 0.16
LSM6-202ENST00000502781 PACRGQ96M98 296 aaPredicted RBP16.02■□□□□ 0.16
LSM6-202ENST00000502781 C10orf25Q5T742 122 aa16.01■□□□□ 0.15
LSM6-202ENST00000502781 PKIGQ9Y2B9 76 aa16.01■□□□□ 0.15
LSM6-202ENST00000502781 UNQ6190/PRO20217Q6UXQ8 127 aa16■□□□□ 0.15
LSM6-202ENST00000502781 SPACA4Q8TDM5 124 aa16■□□□□ 0.15
LSM6-202ENST00000502781 FAT1Q14517 4588 aa16■□□□□ 0.15
LSM6-202ENST00000502781 CHTF8P0CG12 524 aa16■□□□□ 0.15
LSM6-202ENST00000502781 ZNF22P17026 224 aaPredicted RBP16■□□□□ 0.15
LSM6-202ENST00000502781 CHTOPQ9Y3Y2 248 aaKnown RBP16■□□□□ 0.15
LSM6-202ENST00000502781 C11orf86A6NJI1 115 aa15.99■□□□□ 0.15
LSM6-202ENST00000502781 H3BRM9 83 aa15.99■□□□□ 0.15
LSM6-202ENST00000502781 COA6Q5JTJ3 125 aaKnown RBP15.99■□□□□ 0.15
LSM6-202ENST00000502781 C2orf82Q6UX34 121 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms