RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 IMUPQ9GZP8 106 aa3.28□□□□□ -1.88
MATR3-202ENST00000502422 Q9H8V8 135 aa3.28□□□□□ -1.88
MATR3-202ENST00000502422 LINC00574Q9H8X3 128 aa3.28□□□□□ -1.88
MATR3-202ENST00000502422 ZNF580Q9UK33 172 aa3.28□□□□□ -1.88
MATR3-202ENST00000502422 IGLV4-69A0A075B6H9 119 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 IGKV2-40A0A087WW87 121 aaPredicted RBP3.27□□□□□ -1.89
MATR3-202ENST00000502422 A0A0B4J2C4 111 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 H7C423 109 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 IGKV1-17P01599 117 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 IGKV2D-40P01614 121 aaPredicted RBP3.27□□□□□ -1.89
MATR3-202ENST00000502422 CRYGAP11844 174 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 PMVKQ15126 192 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 ATXN8Q156A1 80 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 SMCR5Q8TEV8 140 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 C20orf173Q96LM9 149 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 C11orf86A6NJI1 115 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 COX7CP15954 63 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 EMP1P54849 157 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 SDIM1Q6ZPB5 146 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 Q8TAT8 98 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 DPH3Q96FX2 82 aa3.27□□□□□ -1.89
MATR3-202ENST00000502422 TRBV30A0A0K0K1B3 111 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 GAGE2AQ6NT46 116 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 C2orf82Q6UX34 121 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 HRCT1Q6UXD1 115 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 SCGB3A1Q96QR1 104 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 METTL26Q96S19 204 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 SMIM2Q9BVW6 85 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 C11orf21Q9P2W6 132 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 MUC4Q99102 2169 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 IGHV7-81A0A0B4J1V7 117 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 IGKV3D-20A0A0C4DH25 116 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 TMEM223A0PJW6 202 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 H3BT86 120 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 I3L2K1 104 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 TSHBP01222 138 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 HERVK_113P61574 105 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 HIST1H4AP62805 103 aaKnown RBP3.26□□□□□ -1.89
MATR3-202ENST00000502422 VMA21Q3ZAQ7 101 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 TMEM170BQ5T4T1 132 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 C5orf38Q86SI9 138 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 SPANXDQ9BXN6 97 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 SPANXCQ9NY87 97 aa3.26□□□□□ -1.89
MATR3-202ENST00000502422 HECTD4Q9Y4D8 3996 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 IGHV7-4-1A0A0J9YVY3 117 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 H7C2G1 150 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 APELAP0DMC3 54 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 SYNJ2BPP57105 145 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 PDE6HQ13956 83 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 Q1RN00 199 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 TMEM30BQ3MIR4 351 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 LINC00311Q8N616 119 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 FAM19A4Q96LR4 140 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 UPK3BQ9BT76 320 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 AGPAT4-IT1Q9H0P7 198 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 KIAA1109Q2LD37 5005 aa3.25□□□□□ -1.89
MATR3-202ENST00000502422 A0A0J9YWU9 116 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 hADV29S1A0JD25 119 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 ATP5G1P05496 136 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 C2orf66Q6UXQ4 117 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 MUSTN1Q8IVN3 82 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 IGHV4-4A0A075B6R2 117 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 TINCRA0A1B0GVN0 87 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 RPL27AP46776 148 aaKnown RBP3.24□□□□□ -1.89
MATR3-202ENST00000502422 ORMDL2Q53FV1 153 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 LINC00643Q86TS7 51 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 DYNLRB2Q8TF09 96 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 DCANP1Q8TF63 244 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 EEF1AKMT3Q96AZ1 226 aa3.24□□□□□ -1.89
MATR3-202ENST00000502422 IGIPA6NJ69 53 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 K7EIM0 57 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 LST1O00453 97 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 PAPPA-AS1Q5QFB9 102 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 IGFL4Q6B9Z1 124 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 DSCR8Q96T75 97 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 OVOL2Q9BRP0 275 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 WFDC10AQ9H1F0 79 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 DNAH10Q8IVF4 4471 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 TRBV7-1A0A0A6YYK4 115 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 PRAC2D3DTV9 90 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 J3QQQ9 107 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 ACYP1P07311 99 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 CXCL5P42830 114 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 TMEM258P61165 79 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 NDPQ00604 133 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 NPBQ8NG41 125 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 CLEC2BQ92478 149 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 RPL39LQ96EH5 51 aaKnown RBP3.23□□□□□ -1.89
MATR3-202ENST00000502422 LINC00477Q96M19 166 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 LITAFQ99732 161 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 ICOSQ9Y6W8 199 aa3.23□□□□□ -1.89
MATR3-202ENST00000502422 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.22□□□□□ -1.89
MATR3-202ENST00000502422 TRACP01848 142 aa3.22□□□□□ -1.89
MATR3-202ENST00000502422 SLC50A1Q9BRV3 221 aa3.22□□□□□ -1.89
MATR3-202ENST00000502422 JPT2Q9H910 190 aa3.22□□□□□ -1.89
MATR3-202ENST00000502422 C22orf24Q9Y442 160 aa3.22□□□□□ -1.89
MATR3-202ENST00000502422 LGALS3P17931 250 aaKnown RBP3.22□□□□□ -1.89
MATR3-202ENST00000502422 SPANXN1Q5VSR9 72 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms