RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
HDAC6-236ENST00000498808 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
HDAC6-236ENST00000498808 NUPR1O60356 82 aa9.05□□□□□ -0.96
HDAC6-236ENST00000498808 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
HDAC6-236ENST00000498808 CTDSP1Q9GZU7 261 aa9.05□□□□□ -0.96
HDAC6-236ENST00000498808 TMEM191AQ9H0A3 160 aa9.05□□□□□ -0.96
HDAC6-236ENST00000498808 ANAPC11Q9NYG5 84 aa9.05□□□□□ -0.96
HDAC6-236ENST00000498808 AMN1Q8IY45 258 aa9.04□□□□□ -0.96
HDAC6-236ENST00000498808 TRBV30A0A0K0K1B3 111 aa9.03□□□□□ -0.96
HDAC6-236ENST00000498808 GATCO43716 136 aaKnown RBP9.03□□□□□ -0.96
HDAC6-236ENST00000498808 NRACQ8N912 160 aa9.03□□□□□ -0.96
HDAC6-236ENST00000498808 KANTRA0A1W2PQU2 76 aa9.02□□□□□ -0.97
HDAC6-236ENST00000498808 A8MWL6 223 aa9.02□□□□□ -0.97
HDAC6-236ENST00000498808 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-236ENST00000498808 SUMO2P61956 95 aaKnown RBP9.02□□□□□ -0.97
HDAC6-236ENST00000498808 C2orf82Q6UX34 121 aa9.02□□□□□ -0.97
HDAC6-236ENST00000498808 LINC00173Q6ZV60 143 aa9.02□□□□□ -0.97
HDAC6-236ENST00000498808 KIR2DL4Q99706 377 aa9.02□□□□□ -0.97
HDAC6-236ENST00000498808 C22orf24Q9Y442 160 aa9.02□□□□□ -0.97
HDAC6-236ENST00000498808 TEX46H3BTG2 121 aa9.01□□□□□ -0.97
HDAC6-236ENST00000498808 RPL28P46779 137 aaKnown RBP9.01□□□□□ -0.97
HDAC6-236ENST00000498808 RPL39P62891 51 aaKnown RBP9.01□□□□□ -0.97
HDAC6-236ENST00000498808 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
HDAC6-236ENST00000498808 A0A1B0GUT8 65 aa9□□□□□ -0.97
HDAC6-236ENST00000498808 FAM231DQ6ZW35 169 aa9□□□□□ -0.97
HDAC6-236ENST00000498808 TMEM18Q96B42 140 aa9□□□□□ -0.97
HDAC6-236ENST00000498808 BORCS7Q96B45 105 aa9□□□□□ -0.97
HDAC6-236ENST00000498808 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
HDAC6-236ENST00000498808 CT83Q5H943 113 aa8.99□□□□□ -0.97
HDAC6-236ENST00000498808 IFITM10A6NMD0 228 aa8.98□□□□□ -0.97
HDAC6-236ENST00000498808 HIGD1CA8MV81 97 aa8.98□□□□□ -0.97
HDAC6-236ENST00000498808 BCE1O60756 84 aa8.98□□□□□ -0.97
HDAC6-236ENST00000498808 LINC00242Q5T6M2 205 aa8.98□□□□□ -0.97
HDAC6-236ENST00000498808 PACRGQ96M98 296 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-236ENST00000498808 HBBP68871 147 aa8.97□□□□□ -0.97
HDAC6-236ENST00000498808 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
HDAC6-236ENST00000498808 SRSF3P84103 164 aaKnown RBP8.97□□□□□ -0.97
HDAC6-236ENST00000498808 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
HDAC6-236ENST00000498808 KRTAP4-1Q9BYQ7 146 aa8.97□□□□□ -0.97
HDAC6-236ENST00000498808 PPDPFQ9H3Y8 114 aa8.97□□□□□ -0.97
HDAC6-236ENST00000498808 TGIF2-C20orf24A0A0A6YYL0 155 aa8.96□□□□□ -0.98
HDAC6-236ENST00000498808 PPP1R17O96001 155 aa8.96□□□□□ -0.98
HDAC6-236ENST00000498808 LBHQ53QV2 105 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-236ENST00000498808 XAGE1AQ9HD64 81 aa8.96□□□□□ -0.98
HDAC6-236ENST00000498808 SPANXA1Q9NS26 97 aa8.96□□□□□ -0.98
HDAC6-236ENST00000498808 PPP1R2P9O14990 202 aa8.95□□□□□ -0.98
HDAC6-236ENST00000498808 ZNF727A8MUV8 499 aa8.94□□□□□ -0.98
HDAC6-236ENST00000498808 MRPL55Q7Z7F7 128 aaKnown RBP8.94□□□□□ -0.98
HDAC6-236ENST00000498808 TAGLN2P37802 199 aaKnown RBP8.93□□□□□ -0.98
HDAC6-236ENST00000498808 ASB16-AS1Q495Z4 193 aa8.93□□□□□ -0.98
HDAC6-236ENST00000498808 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
HDAC6-236ENST00000498808 TP73-AS1Q9UF72 201 aa8.93□□□□□ -0.98
HDAC6-236ENST00000498808 MRPL51Q4U2R6 128 aaKnown RBP8.92□□□□□ -0.98
HDAC6-236ENST00000498808 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
HDAC6-236ENST00000498808 RPL32P62910 135 aaKnown RBP8.91□□□□□ -0.98
HDAC6-236ENST00000498808 CTAG1AP78358 180 aa8.91□□□□□ -0.98
HDAC6-236ENST00000498808 C20orf78Q9BR46 151 aa8.91□□□□□ -0.98
HDAC6-236ENST00000498808 TRBV24-1A0A075B6N3 115 aa8.9□□□□□ -0.98
HDAC6-236ENST00000498808 RIGQ13278 110 aa8.9□□□□□ -0.98
HDAC6-236ENST00000498808 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
HDAC6-236ENST00000498808 TMEM250H0YL14 139 aa8.89□□□□□ -0.99
HDAC6-236ENST00000498808 TCAPO15273 167 aa8.89□□□□□ -0.99
HDAC6-236ENST00000498808 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
HDAC6-236ENST00000498808 LINC00167Q96N53 147 aa8.89□□□□□ -0.99
HDAC6-236ENST00000498808 SMIM2Q9BVW6 85 aa8.89□□□□□ -0.99
HDAC6-236ENST00000498808 IGKV2D-26A0A0A0MRZ7 120 aa8.88□□□□□ -0.99
HDAC6-236ENST00000498808 LINC01561Q8N1V8 128 aa8.88□□□□□ -0.99
HDAC6-236ENST00000498808 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
HDAC6-236ENST00000498808 TNFRSF6BO95407 300 aa8.87□□□□□ -0.99
HDAC6-236ENST00000498808 KRTAP13-3Q3SY46 172 aa8.87□□□□□ -0.99
HDAC6-236ENST00000498808 TOMM7Q9P0U1 55 aa8.87□□□□□ -0.99
HDAC6-236ENST00000498808 LINC00862A6NCI5 91 aa8.86□□□□□ -0.99
HDAC6-236ENST00000498808 UBE2AP49459 152 aa8.86□□□□□ -0.99
HDAC6-236ENST00000498808 CKS1BP61024 79 aa8.86□□□□□ -0.99
HDAC6-236ENST00000498808 LINC01551Q86U37 167 aa8.86□□□□□ -0.99
HDAC6-236ENST00000498808 OSTCQ9NRP0 149 aa8.86□□□□□ -0.99
HDAC6-236ENST00000498808 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
HDAC6-236ENST00000498808 PRSS2P07478 247 aa8.85□□□□□ -0.99
HDAC6-236ENST00000498808 CKS2P33552 79 aa8.85□□□□□ -0.99
HDAC6-236ENST00000498808 IFI27P40305 119 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-236ENST00000498808 CEBPGP53567 150 aa8.85□□□□□ -0.99
HDAC6-236ENST00000498808 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
HDAC6-236ENST00000498808 LINC00337Q8N6G1 96 aa8.85□□□□□ -0.99
HDAC6-236ENST00000498808 V9GYV3 84 aa8.85□□□□□ -0.99
HDAC6-236ENST00000498808 C6orf226Q5I0X4 101 aa8.84□□□□□ -0.99
HDAC6-236ENST00000498808 FP248Q71RG6 208 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-236ENST00000498808 Q8IZM0 81 aa8.84□□□□□ -0.99
HDAC6-236ENST00000498808 C3orf22Q8N5N4 141 aa8.84□□□□□ -0.99
HDAC6-236ENST00000498808 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
HDAC6-236ENST00000498808 Q6ZN92 141 aa8.83□□□□□ -1
HDAC6-236ENST00000498808 TMEM141Q96I45 108 aa8.83□□□□□ -1
HDAC6-236ENST00000498808 NPYP01303 97 aa8.82□□□□□ -1
HDAC6-236ENST00000498808 PNRC1Q12796 327 aaPredicted RBP8.82□□□□□ -1
HDAC6-236ENST00000498808 ZC2HC1BQ5TFG8 222 aa8.82□□□□□ -1
HDAC6-236ENST00000498808 SMIM7Q9BQ49 75 aa8.82□□□□□ -1
HDAC6-236ENST00000498808 ALKBH7Q9BT30 221 aaPredicted RBP8.82□□□□□ -1
HDAC6-236ENST00000498808 D6R8Y8 96 aa8.81□□□□□ -1
HDAC6-236ENST00000498808 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
HDAC6-236ENST00000498808 RGS21Q2M5E4 152 aa8.81□□□□□ -1
HDAC6-236ENST00000498808 TEX43Q6ZNM6 134 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms