RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 I3L3M4 83 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 IGHV3-30P01768 117 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 IGHV3-30-5P0DP03 117 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 TMEM61Q8N0U2 210 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 ZNF418Q8TF45 676 aaPredicted RBP6.39□□□□□ -1.39
FN1-227ENST00000498719 WWC2-AS2Q96NR7 200 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 IGLV4-3A0A075B6K6 122 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 FSHBP01225 129 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 CFC1BP0CG36 223 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 CFC1P0CG37 223 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 NDUFA11Q86Y39 141 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 SLC25A29Q8N8R3 303 aa6.39□□□□□ -1.39
FN1-227ENST00000498719 H3BMM0 161 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 NDUFC2O95298 119 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 ZNF22P17026 224 aaPredicted RBP6.38□□□□□ -1.39
FN1-227ENST00000498719 LGALS3P17931 250 aaKnown RBP6.38□□□□□ -1.39
FN1-227ENST00000498719 PSMB2P49721 201 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 RHOHQ15669 191 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 FAM104AQ969W3 186 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 ITPR2Q14571 2701 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 TMEM223A0PJW6 202 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 Q5XG85 94 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 NFE4Q86UQ8 179 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 GTSF1LQ9H1H1 148 aa6.38□□□□□ -1.39
FN1-227ENST00000498719 K7EQD1 137 aa6.37□□□□□ -1.39
FN1-227ENST00000498719 IGHV3OR16-12A0A075B7B8 117 aa6.37□□□□□ -1.39
FN1-227ENST00000498719 CD28P10747 220 aa6.37□□□□□ -1.39
FN1-227ENST00000498719 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
FN1-227ENST00000498719 TRAV8-3A0A0A6YYJ7 113 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 IGHV3-38A0A0C4DH36 116 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 UBE2D3P61077 147 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 DAD1P61803 113 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 UBE2D2P62837 147 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 CFAP126Q5VTH2 177 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 TRAV2A0A0B4J234 112 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 LEPROTO15243 131 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 LINC00694P0DN24 101 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 C10orf126Q8N4M7 172 aa6.36□□□□□ -1.39
FN1-227ENST00000498719 H7C2G1 150 aa6.35□□□□□ -1.39
FN1-227ENST00000498719 TCL1BO95988 128 aa6.35□□□□□ -1.39
FN1-227ENST00000498719 ANAPC13Q9BS18 74 aa6.35□□□□□ -1.39
FN1-227ENST00000498719 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.35□□□□□ -1.39
FN1-227ENST00000498719 IGKV2-29A2NJV5 120 aaPredicted RBP6.35□□□□□ -1.39
FN1-227ENST00000498719 M0R2P5 195 aa6.35□□□□□ -1.39
FN1-227ENST00000498719 PRAC1Q96KF2 57 aa6.35□□□□□ -1.39
FN1-227ENST00000498719 IGHV3-30-3P0DP02 117 aa6.34□□□□□ -1.39
FN1-227ENST00000498719 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
FN1-227ENST00000498719 A8MTW9 85 aa6.34□□□□□ -1.4
FN1-227ENST00000498719 DYNLRB2Q8TF09 96 aa6.34□□□□□ -1.4
FN1-227ENST00000498719 LINC00476Q8WZB0 136 aa6.34□□□□□ -1.4
FN1-227ENST00000498719 CHCHD7Q9BUK0 85 aa6.34□□□□□ -1.4
FN1-227ENST00000498719 PRO1854Q9UHT4 67 aa6.34□□□□□ -1.4
FN1-227ENST00000498719 A0A0J9YXY3 114 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 A8MWV9 139 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 DEFB113Q30KQ7 82 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 J3QR89 54 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 SCGB1C2P0DMR2 95 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 MRPS36P82909 103 aaKnown RBP6.33□□□□□ -1.4
FN1-227ENST00000498719 DEFB114Q30KQ6 69 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 Q6ZUT4 128 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 Q8N2B8 174 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 C4orf3Q8WVX3 66 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 LINC00467Q9BRT7 94 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 TIMM21Q9BVV7 248 aa6.33□□□□□ -1.4
FN1-227ENST00000498719 GCN1Q92616 2671 aaKnown RBP6.32□□□□□ -1.4
FN1-227ENST00000498719 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
FN1-227ENST00000498719 NPC2P61916 151 aa6.32□□□□□ -1.4
FN1-227ENST00000498719 UBE2D4Q9Y2X8 147 aa6.32□□□□□ -1.4
FN1-227ENST00000498719 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
FN1-227ENST00000498719 NBEAL2Q6ZNJ1 2754 aa6.32□□□□□ -1.4
FN1-227ENST00000498719 FN1P02751 2386 aaKnown RBP6.32□□□□□ -1.4
FN1-227ENST00000498719 IGHV3-33P01772 117 aa6.31□□□□□ -1.4
FN1-227ENST00000498719 ADAMTSL4-AS1Q5T5F5 129 aa6.31□□□□□ -1.4
FN1-227ENST00000498719 TMEM263Q8WUH6 116 aaKnown RBP6.31□□□□□ -1.4
FN1-227ENST00000498719 PDZD2O15018 2839 aa6.31□□□□□ -1.4
FN1-227ENST00000498719 PRSS2P07478 247 aa6.31□□□□□ -1.4
FN1-227ENST00000498719 LITAFQ99732 161 aa6.31□□□□□ -1.4
FN1-227ENST00000498719 TRAV4A0A0B4J268 109 aa6.3□□□□□ -1.4
FN1-227ENST00000498719 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
FN1-227ENST00000498719 KRTAP1-3Q8IUG1 177 aa6.3□□□□□ -1.4
FN1-227ENST00000498719 NTN5Q8WTR8 489 aaPredicted RBP6.3□□□□□ -1.4
FN1-227ENST00000498719 LCE2BO14633 110 aa6.3□□□□□ -1.4
FN1-227ENST00000498719 INSP01308 110 aa6.3□□□□□ -1.4
FN1-227ENST00000498719 IGHV3-53P01767 116 aa6.3□□□□□ -1.4
FN1-227ENST00000498719 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.3□□□□□ -1.4
FN1-227ENST00000498719 NDUFA12Q9UI09 145 aa6.3□□□□□ -1.4
FN1-227ENST00000498719 IGHV1-58A0A0C4DH39 117 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 HERVK_113P63121 156 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 VWFP04275 2813 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 HELZ2Q9BYK8 2649 aaKnown RBP6.29□□□□□ -1.4
FN1-227ENST00000498719 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 TRBV20-1A0A075B6N2 111 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 Q1RN00 199 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 LYRM7Q5U5X0 104 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 Q6ZRP5 223 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 DAND5Q8N907 189 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 WFDC11Q8NEX6 87 aa6.29□□□□□ -1.4
FN1-227ENST00000498719 VSIG2Q96IQ7 327 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms