RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 KCNS1Q96KK3 526 aa3.61□□□□□ -1.83
SPTA1-209ENST00000498708 ATP5SQ99766 215 aa3.61□□□□□ -1.83
SPTA1-209ENST00000498708 TM2D2Q9BX73 214 aa3.61□□□□□ -1.83
SPTA1-209ENST00000498708 OTORQ9NRC9 128 aa3.61□□□□□ -1.83
SPTA1-209ENST00000498708 KCNIP2Q9NS61 270 aa3.61□□□□□ -1.83
SPTA1-209ENST00000498708 TRBV6-4A0A1B0GX49 114 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 GGTLC3B5MD39 225 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 CXCL1P09341 107 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 NDUFV3P56181 108 aaKnown RBP3.6□□□□□ -1.83
SPTA1-209ENST00000498708 TWIST1Q15672 202 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 SPATA45Q537H7 98 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 Q6ZUT4 128 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 PRNTQ86SH4 94 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 AP1S3Q96PC3 154 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 PMCHL2Q9BQD1 86 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 TMEM191AQ9H0A3 160 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 JPT2Q9H910 190 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 Q9UF83 564 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 PAM16Q9Y3D7 125 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 LENEPQ9Y5L5 61 aa3.6□□□□□ -1.83
SPTA1-209ENST00000498708 TRAV8-3A0A0A6YYJ7 113 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 ATP5LO75964 103 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 RNASE3P12724 160 aaKnown RBP3.59□□□□□ -1.83
SPTA1-209ENST00000498708 IFITM1P13164 125 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 S100A4P26447 101 aaKnown RBP3.59□□□□□ -1.83
SPTA1-209ENST00000498708 HINT1P49773 126 aaPredicted RBP3.59□□□□□ -1.83
SPTA1-209ENST00000498708 BVES-AS1Q5T3Y7 98 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 FAM231DQ6ZW35 169 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 C14orf178Q8N769 122 aaPredicted RBP3.59□□□□□ -1.83
SPTA1-209ENST00000498708 CIRBP-AS1Q8TBR5 109 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 UBE2WQ96B02 151 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 KIR2DL4Q99706 377 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 KLK12Q9UKR0 248 aa3.59□□□□□ -1.83
SPTA1-209ENST00000498708 GRIFINA4D1Z8 144 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 TCRAP04437 139 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 ARL14EPLP0DKL9 152 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 MGST1P10620 155 aaKnown RBP3.58□□□□□ -1.84
SPTA1-209ENST00000498708 NTF3P20783 257 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 SUMO2P61956 95 aaKnown RBP3.58□□□□□ -1.84
SPTA1-209ENST00000498708 LAGE3Q14657 143 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 MEIG1Q5JSS6 88 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 FAM74A4Q5TZK3 123 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 RASL11AQ6T310 242 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 PPP1R1CQ8WVI7 109 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 C9orf85Q96MD7 179 aa3.58□□□□□ -1.84
SPTA1-209ENST00000498708 IGKV2D-30A0A075B6S6 120 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 TMSB15BA0A087X1C1 80 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 IGKV3D-20A0A0C4DH25 116 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 CCDC179H3BU77 68 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 H3BVH4 76 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 NDUFC2O95298 119 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 IGLV2-11P01706 119 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 H2BFSP57053 126 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
SPTA1-209ENST00000498708 RPL37AP61513 92 aaKnown RBP3.57□□□□□ -1.84
SPTA1-209ENST00000498708 PQLC2Q6ZP29 291 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 CYB561D1Q8N8Q1 229 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 Q8N976 141 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 RMI2Q96E14 147 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 LINC00479Q96M42 142 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 CHAC1Q9BUX1 264 aa3.57□□□□□ -1.84
SPTA1-209ENST00000498708 A0A0U1RQV1 116 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 A8MWV9 139 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 C9JQL5 133 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 DPM2O94777 84 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 HLA-DQA1P01909 254 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 ARMS2P0C7Q2 107 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 LINC00694P0DN24 101 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 FABP2P12104 132 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 GCHFRP30047 84 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 TMEM258P61165 79 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 CYCSP99999 105 aaKnown RBP3.56□□□□□ -1.84
SPTA1-209ENST00000498708 GAGE2BQ13066 116 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 GAGE2EQ4V326 116 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 NRACQ8N912 160 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 OR10AG1Q8NH19 301 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 RAB37Q96AX2 223 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 AQP10Q96PS8 301 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 GAGE2DQ9UEU5 116 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 LAMTOR3Q9UHA4 124 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 EPDR1Q9UM22 224 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 SPCS1Q9Y6A9 102 aa3.56□□□□□ -1.84
SPTA1-209ENST00000498708 TRAV9-1A0A075B6T8 112 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 A0A1W2PPM0 123 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 M0R381 172 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 UQCRQO14949 82 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 CRPP02741 224 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 IGLC6P0CF74 106 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 C10orf25Q5T742 122 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 CLPSL2Q6UWE3 100 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 ZFP2Q6ZN57 461 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 Q6ZRU5 148 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 ATOH7Q8N100 152 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 C18orf32Q8TCD1 76 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 CYTL1Q9NRR1 136 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 ARL2-SNX15V9GYD0 113 aa3.55□□□□□ -1.84
SPTA1-209ENST00000498708 FAM231BA6NCW3 169 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 H3BMG7 143 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 PANO1I0J062 215 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms