RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CYTL1Q9NRR1 136 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 NOP16Q9Y3C1 178 aaKnown RBP3.28□□□□□ -1.88
BRCA1-224ENST00000497488 SERP1Q9Y6X1 66 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 CADP27708 2225 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 ALPK2Q86TB3 2170 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 ITPR3Q14573 2671 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 USF3Q68DE3 2245 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 C2orf70A6NJV1 201 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 GEMIN2O14893 280 aaKnown RBP3.27□□□□□ -1.89
BRCA1-224ENST00000497488 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-224ENST00000497488 CCL8P80075 99 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 TAS2R8Q9NYW2 309 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 TEP1Q99973 2627 aaKnown RBP3.27□□□□□ -1.89
BRCA1-224ENST00000497488 ROS1P08922 2347 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 CR1P17927 2039 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 MED13LQ71F56 2210 aa3.27□□□□□ -1.89
BRCA1-224ENST00000497488 KIAA2026Q5HYC2 2103 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 J3QLW9 94 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 C6orf52Q5T4I8 152 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 LINC01590Q5TEZ4 76 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 MRPL54Q6P161 138 aaKnown RBP3.26□□□□□ -1.89
BRCA1-224ENST00000497488 CASC2Q6XLA1 102 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 Q8TAT8 98 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 LSM10Q969L4 123 aaKnown RBP3.26□□□□□ -1.89
BRCA1-224ENST00000497488 AMELYQ99218 206 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 NF1P21359 2839 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 CUBNO60494 3623 aa3.26□□□□□ -1.89
BRCA1-224ENST00000497488 FLNAP21333 2647 aaKnown RBP3.25□□□□□ -1.89
BRCA1-224ENST00000497488 ARFGEF3Q5TH69 2177 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 MCRIP1C9JLW8 97 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 GNGT2O14610 69 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 PDE6HQ13956 83 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 OR2T2Q6IF00 324 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 IGFL1Q6UW32 110 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 C2orf82Q6UX34 121 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 FOXI2Q6ZQN5 318 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 VSTM2AQ8TAG5 236 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 TTTY10Q9BZA0 68 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 CMC2Q9NRP2 79 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 MAP1AP78559 2803 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-224ENST00000497488 ZANQ9Y493 2812 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 ACANP16112 2415 aa3.25□□□□□ -1.89
BRCA1-224ENST00000497488 FN1P02751 2386 aaKnown RBP3.24□□□□□ -1.89
BRCA1-224ENST00000497488 M0R135 149 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 MIR22HGQ0VDD5 57 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 ELOBQ15370 118 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 C12orf73Q69YU5 71 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 Q6AWC8 147 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 KRTAP26-1Q6PEX3 210 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 AP4S1Q9Y587 144 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 PLCE1Q9P212 2302 aa3.24□□□□□ -1.89
BRCA1-224ENST00000497488 ZFHX3Q15911 3703 aa3.23□□□□□ -1.89
BRCA1-224ENST00000497488 SVEP1Q4LDE5 3571 aa3.23□□□□□ -1.89
BRCA1-224ENST00000497488 IQCF6A8MYZ5 107 aa3.23□□□□□ -1.89
BRCA1-224ENST00000497488 ZNF833PQ6ZTB9 187 aa3.23□□□□□ -1.89
BRCA1-224ENST00000497488 SLC25A26Q70HW3 274 aa3.23□□□□□ -1.89
BRCA1-224ENST00000497488 LINC00526Q96FQ7 95 aa3.23□□□□□ -1.89
BRCA1-224ENST00000497488 LINC00167Q96N53 147 aa3.23□□□□□ -1.89
BRCA1-224ENST00000497488 HEATR1Q9H583 2144 aaKnown RBP3.23□□□□□ -1.89
BRCA1-224ENST00000497488 RTTNQ86VV8 2226 aa3.23□□□□□ -1.89
BRCA1-224ENST00000497488 ABCA2Q9BZC7 2435 aa3.22□□□□□ -1.89
BRCA1-224ENST00000497488 IGKV2-24A0A0C4DH68 120 aa3.22□□□□□ -1.89
BRCA1-224ENST00000497488 Q1T7F1 81 aa3.22□□□□□ -1.89
BRCA1-224ENST00000497488 KRTAP21-3Q3LHN1 58 aa3.22□□□□□ -1.89
BRCA1-224ENST00000497488 C9orf153Q5TBE3 101 aa3.22□□□□□ -1.89
BRCA1-224ENST00000497488 FP248Q71RG6 208 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-224ENST00000497488 SPACA4Q8TDM5 124 aa3.22□□□□□ -1.89
BRCA1-224ENST00000497488 TVP23CQ96ET8 276 aa3.22□□□□□ -1.89
BRCA1-224ENST00000497488 TMEM106BQ9NUM4 274 aa3.22□□□□□ -1.89
BRCA1-224ENST00000497488 FBN1P35555 2871 aaKnown RBP3.22□□□□□ -1.89
BRCA1-224ENST00000497488 CHD3Q12873 2000 aaKnown RBP3.22□□□□□ -1.89
BRCA1-224ENST00000497488 NSD1Q96L73 2696 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-224ENST00000497488 MTORP42345 2549 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 SDHAF1A6NFY7 115 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 H3BSH0 61 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 IGLV3-1P01715 115 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 TFF1P04155 84 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 SPINK8P0C7L1 97 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 IFITM1P13164 125 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 SPTSSAQ969W0 71 aa3.21□□□□□ -1.9
BRCA1-224ENST00000497488 CSPG4Q6UVK1 2322 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 A6NIN4 97 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 IL5P05113 134 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 ADCYAP1P18509 176 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 C1orf137Q5JT78 98 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 SVBPQ8N300 66 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 C5orf17Q8NAS9 161 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 DEFB108BQ8NET1 73 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 SNHG12Q9BXW3 62 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
BRCA1-224ENST00000497488 NIPBLQ6KC79 2804 aaeCLIP3.2□□□□□ -1.9
BRCA1-224ENST00000497488 OOSP1A8MZH6 123 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 J3QRE1 110 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 GYPAP02724 150 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 BRS3P32247 399 aa3.19□□□□□ -1.9
BRCA1-224ENST00000497488 S100A10P60903 97 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms