RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 Q6ZUT4 128 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 GTF2H5Q6ZYL4 71 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 LINC00612Q8N6U2 182 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 FAM104AQ969W3 186 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 TMEM101Q96IK0 257 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 TMEM243Q9BU79 118 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 GEMIN7Q9H840 131 aaKnown RBP4.37□□□□□ -1.71
ITGA6-211ENST00000497107 SPANXB1Q9NS25 103 aaPredicted RBP4.37□□□□□ -1.71
ITGA6-211ENST00000497107 NHP2Q9NX24 153 aaKnown RBP4.37□□□□□ -1.71
ITGA6-211ENST00000497107 CSDC2Q9Y534 153 aaKnown RBP4.37□□□□□ -1.71
ITGA6-211ENST00000497107 AKAP9Q99996 3911 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 NF1P21359 2839 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 MTORP42345 2549 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 NBPF19A0A087WUL8 3843 aa4.37□□□□□ -1.71
ITGA6-211ENST00000497107 A0A0J9YY99 117 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 LYRM9A8MSI8 78 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 UBE2L6O14933 153 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 CCL25O15444 150 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 DEFB130BP0DP73 79 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 DEFB130AP0DP74 79 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 UBE2D1P51668 147 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 C12orf74Q32Q52 190 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
ITGA6-211ENST00000497107 NTM-AS1Q6ZSK4 140 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 SBSPONQ8IVN8 264 aa4.36□□□□□ -1.71
ITGA6-211ENST00000497107 ZNF469Q96JG9 3925 aaPredicted RBP4.36□□□□□ -1.71
ITGA6-211ENST00000497107 IGHV1-58A0A0C4DH39 117 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 A0A1B0GWB2 263 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 A0A1W2PPM0 123 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 K7EP13 123 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 IGHV3-30-3P0DP02 117 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 FABP2P12104 132 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 TSPEAR-AS2P59090 65 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 HERVK_113P63121 156 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 OR5A1Q8NGJ0 315 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 SPATA3Q8NHX4 192 aa4.35□□□□□ -1.71
ITGA6-211ENST00000497107 SETXQ7Z333 2677 aaKnown RBP4.34□□□□□ -1.71
ITGA6-211ENST00000497107 IGHV3-64A0A075B6Q5 118 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 LOC100131303A0A0U1RQF7 123 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 IGLL5B9A064 214 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 TMEM238C9JI98 176 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 K7EP34 96 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 LINC00694P0DN24 101 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 VSIG2Q96IQ7 327 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 CDC42SE2Q9NRR3 84 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 PRO0255Q9UI72 69 aa4.34□□□□□ -1.71
ITGA6-211ENST00000497107 OTOGQ6ZRI0 2925 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 IGLV5-45A0A087WSX0 123 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 IGLV5-52A0A0A0MRZ9 124 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 TRBV6-8A0A0A6YYG3 113 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 A0A0J9YXY3 114 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 K7ERJ3 54 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 IGHV3-30P01768 117 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 SPINK8P0C7L1 97 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 IGHV3-30-5P0DP03 117 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 MIFP14174 115 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 GAGE6Q13070 117 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 DEFB135Q30KP9 77 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 LINC00242Q5T6M2 205 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 ATP6V0E2Q8NHE4 81 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 NAA38Q9BRA0 125 aaKnown RBP4.33□□□□□ -1.72
ITGA6-211ENST00000497107 CDKN2A-AS1Q9UH64 79 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 NDUFA12Q9UI09 145 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 SPCS1Q9Y6A9 102 aa4.33□□□□□ -1.72
ITGA6-211ENST00000497107 SETD2Q9BYW2 2564 aaPredicted RBP4.33□□□□□ -1.72
ITGA6-211ENST00000497107 TRAV8-3A0A0A6YYJ7 113 aa4.32□□□□□ -1.72
ITGA6-211ENST00000497107 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.32□□□□□ -1.72
ITGA6-211ENST00000497107 TRAV13-1A0A0B4J241 112 aa4.32□□□□□ -1.72
ITGA6-211ENST00000497107 DAD1P61803 113 aa4.32□□□□□ -1.72
ITGA6-211ENST00000497107 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
ITGA6-211ENST00000497107 ZFAND6Q6FIF0 208 aa4.32□□□□□ -1.72
ITGA6-211ENST00000497107 CHCHD5Q9BSY4 110 aa4.32□□□□□ -1.72
ITGA6-211ENST00000497107 Q9H8V8 135 aa4.32□□□□□ -1.72
ITGA6-211ENST00000497107 NOTCH2Q04721 2471 aa4.32□□□□□ -1.72
ITGA6-211ENST00000497107 FN1P02751 2386 aaKnown RBP4.32□□□□□ -1.72
ITGA6-211ENST00000497107 NDUFA1O15239 70 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 TIMM17BO60830 172 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 APOMO95445 188 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 ATP5G1P05496 136 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 SPART-AS1P0CW21 52 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 COX6A2Q02221 97 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 CIRBPQ14011 172 aaKnown RBP4.31□□□□□ -1.72
ITGA6-211ENST00000497107 KRTAP24-1Q3LI83 254 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 LYRM7Q5U5X0 104 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 MUSTN1Q8IVN3 82 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 C10orf126Q8N4M7 172 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 C3orf56Q8N813 242 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 SPANXDQ9BXN6 97 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 SPANXCQ9NY87 97 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 NSD1Q96L73 2696 aaPredicted RBP4.31□□□□□ -1.72
ITGA6-211ENST00000497107 C2CD3Q4AC94 2353 aa4.31□□□□□ -1.72
ITGA6-211ENST00000497107 HIVEP1P15822 2718 aa4.3□□□□□ -1.72
ITGA6-211ENST00000497107 TEX48A0A1B0GUV7 120 aa4.3□□□□□ -1.72
ITGA6-211ENST00000497107 CFC1BP0CG36 223 aa4.3□□□□□ -1.72
ITGA6-211ENST00000497107 CFC1P0CG37 223 aa4.3□□□□□ -1.72
ITGA6-211ENST00000497107 IFITM1P13164 125 aa4.3□□□□□ -1.72
ITGA6-211ENST00000497107 Q8NAQ8 132 aa4.3□□□□□ -1.72
ITGA6-211ENST00000497107 PRO1854Q9UHT4 67 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms