RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
SRSF4-205ENST00000497015 CCL25O15444 150 aa6.37□□□□□ -1.39
SRSF4-205ENST00000497015 SNAPINO95295 136 aa6.37□□□□□ -1.39
SRSF4-205ENST00000497015 HLA-DQA1P01909 254 aa6.37□□□□□ -1.39
SRSF4-205ENST00000497015 Q75L30 129 aa6.37□□□□□ -1.39
SRSF4-205ENST00000497015 SVBPQ8N300 66 aa6.37□□□□□ -1.39
SRSF4-205ENST00000497015 PRELID3AQ96N28 172 aa6.37□□□□□ -1.39
SRSF4-205ENST00000497015 TIMM21Q9BVV7 248 aa6.37□□□□□ -1.39
SRSF4-205ENST00000497015 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.36□□□□□ -1.39
SRSF4-205ENST00000497015 IGKV2-29A2NJV5 120 aaPredicted RBP6.36□□□□□ -1.39
SRSF4-205ENST00000497015 NPYP01303 97 aa6.36□□□□□ -1.39
SRSF4-205ENST00000497015 MT-ND6P03923 174 aa6.36□□□□□ -1.39
SRSF4-205ENST00000497015 RNASEKQ6P5S7 137 aaKnown RBP6.36□□□□□ -1.39
SRSF4-205ENST00000497015 OR5A1Q8NGJ0 315 aa6.36□□□□□ -1.39
SRSF4-205ENST00000497015 GNB1LQ9BYB4 327 aa6.36□□□□□ -1.39
SRSF4-205ENST00000497015 KRTAP26-1Q6PEX3 210 aa6.35□□□□□ -1.39
SRSF4-205ENST00000497015 CHAC1Q9BUX1 264 aa6.35□□□□□ -1.39
SRSF4-205ENST00000497015 MAP1LC3AQ9H492 121 aa6.35□□□□□ -1.39
SRSF4-205ENST00000497015 RPS10P5Q9NQ39 176 aa6.35□□□□□ -1.39
SRSF4-205ENST00000497015 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
SRSF4-205ENST00000497015 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 H0Y8G0 127 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 APOC3P02656 99 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 RAB5AP20339 215 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 G0S2P27469 103 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 FOXI1Q12951 378 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 BAALCQ8WXS3 180 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 SPANXA1Q9NS26 97 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
SRSF4-205ENST00000497015 A0A0U1RRA0 63 aa6.33□□□□□ -1.4
SRSF4-205ENST00000497015 ORMDL2Q53FV1 153 aa6.33□□□□□ -1.4
SRSF4-205ENST00000497015 CLPSL2Q6UWE3 100 aa6.33□□□□□ -1.4
SRSF4-205ENST00000497015 Q8N8P6 123 aa6.33□□□□□ -1.4
SRSF4-205ENST00000497015 NXT2Q9NPJ8 142 aaKnown RBP6.33□□□□□ -1.4
SRSF4-205ENST00000497015 PYGO1Q9Y3Y4 419 aa6.33□□□□□ -1.4
SRSF4-205ENST00000497015 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.32□□□□□ -1.4
SRSF4-205ENST00000497015 LINC01549A6NIU2 74 aa6.32□□□□□ -1.4
SRSF4-205ENST00000497015 LECT2O14960 151 aa6.32□□□□□ -1.4
SRSF4-205ENST00000497015 MRPS36P82909 103 aaKnown RBP6.32□□□□□ -1.4
SRSF4-205ENST00000497015 SS18Q15532 418 aa6.32□□□□□ -1.4
SRSF4-205ENST00000497015 IGLV10-54A0A075B6I4 117 aa6.31□□□□□ -1.4
SRSF4-205ENST00000497015 LINC00959A0A1B0GUT2 108 aa6.31□□□□□ -1.4
SRSF4-205ENST00000497015 C1orf196B1AJZ1 125 aa6.31□□□□□ -1.4
SRSF4-205ENST00000497015 CHCHD10Q8WYQ3 142 aaPredicted RBP6.31□□□□□ -1.4
SRSF4-205ENST00000497015 IFI27P40305 119 aaPredicted RBP6.3□□□□□ -1.4
SRSF4-205ENST00000497015 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
SRSF4-205ENST00000497015 RPL37AP61513 92 aaKnown RBP6.29□□□□□ -1.4
SRSF4-205ENST00000497015 ALKBH7Q9BT30 221 aaPredicted RBP6.29□□□□□ -1.4
SRSF4-205ENST00000497015 VCX2Q9H322 139 aa6.29□□□□□ -1.4
SRSF4-205ENST00000497015 CYSLTR1Q9Y271 337 aa6.29□□□□□ -1.4
SRSF4-205ENST00000497015 LPAP08519 4548 aa6.28□□□□□ -1.4
SRSF4-205ENST00000497015 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.28□□□□□ -1.4
SRSF4-205ENST00000497015 IGKV3OR2-268A0A0C4DH90 116 aa6.28□□□□□ -1.4
SRSF4-205ENST00000497015 LOC389332A0A1B0GUA5 103 aa6.28□□□□□ -1.4
SRSF4-205ENST00000497015 LINC01546A6NGU7 62 aa6.28□□□□□ -1.4
SRSF4-205ENST00000497015 PRSS1P07477 247 aa6.28□□□□□ -1.4
SRSF4-205ENST00000497015 RPL39P62891 51 aaKnown RBP6.28□□□□□ -1.4
SRSF4-205ENST00000497015 PAPPA-AS1Q5QFB9 102 aa6.28□□□□□ -1.4
SRSF4-205ENST00000497015 C9orf163Q8N9P6 203 aa6.28□□□□□ -1.4
SRSF4-205ENST00000497015 GVQW2A0A096LPI5 108 aaPredicted RBP6.27□□□□□ -1.41
SRSF4-205ENST00000497015 IGHV1-58A0A0C4DH39 117 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 FABP9Q0Z7S8 132 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 KIAA1644Q3SXP7 199 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 C2orf66Q6UXQ4 117 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 Q6ZUT4 128 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 C15orf56Q8N910 161 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 TMEM141Q96I45 108 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 TRAPPC1Q9Y5R8 145 aa6.27□□□□□ -1.41
SRSF4-205ENST00000497015 hDV102S1A0JD36 115 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 XCL1P47992 114 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 Q6ZN92 141 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 Q6ZRU5 148 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 PRSS3P2Q8NHM4 247 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 FAM104AQ969W3 186 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 YPEL4Q96NS1 127 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 TIMM17AQ99595 171 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 SMCO4Q9NRQ5 59 aa6.26□□□□□ -1.41
SRSF4-205ENST00000497015 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 TGIF2-C20orf24A0A0A6YYL0 155 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 TRAV13-1A0A0B4J241 112 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 IGIPA6NJ69 53 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 COX7A2LO14548 114 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 APOMO95445 188 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 TEX43Q6ZNM6 134 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 TOMM6Q96B49 74 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 C2orf88Q9BSF0 95 aa6.25□□□□□ -1.41
SRSF4-205ENST00000497015 IFITM10A6NMD0 228 aa6.24□□□□□ -1.41
SRSF4-205ENST00000497015 SEC11AP67812 179 aa6.24□□□□□ -1.41
SRSF4-205ENST00000497015 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
SRSF4-205ENST00000497015 ERASQ7Z444 233 aa6.24□□□□□ -1.41
SRSF4-205ENST00000497015 FAM19A3Q7Z5A8 133 aa6.24□□□□□ -1.41
SRSF4-205ENST00000497015 AMELXQ99217 191 aa6.24□□□□□ -1.41
SRSF4-205ENST00000497015 IGHV3-64A0A075B6Q5 118 aa6.23□□□□□ -1.41
SRSF4-205ENST00000497015 IGHV3OR16-9A0A0B4J2B5 98 aa6.23□□□□□ -1.41
SRSF4-205ENST00000497015 PANO1I0J062 215 aa6.23□□□□□ -1.41
SRSF4-205ENST00000497015 RAB5BP61020 215 aa6.23□□□□□ -1.41
SRSF4-205ENST00000497015 HERV-K104P63124 156 aa6.23□□□□□ -1.41
SRSF4-205ENST00000497015 RNASE13Q5GAN3 156 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms